Chiloscyllium plagiosum (whitespotted bambooshark): 122559328
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Entry
122559328 CDS
T08871
Symbol
mdm2
Name
(RefSeq) E3 ubiquitin-protein ligase Mdm2 isoform X1
KO
K06643
E3 ubiquitin-protein ligase Mdm2 [EC:
2.3.2.27
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04068
FoxO signaling pathway
cpla04110
Cell cycle
cpla04115
p53 signaling pathway
cpla04120
Ubiquitin mediated proteolysis
cpla04144
Endocytosis
cpla04218
Cellular senescence
cpla04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122559328 (mdm2)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
122559328 (mdm2)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122559328 (mdm2)
09143 Cell growth and death
04110 Cell cycle
122559328 (mdm2)
04115 p53 signaling pathway
122559328 (mdm2)
04218 Cellular senescence
122559328 (mdm2)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
122559328 (mdm2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpla04131
]
122559328 (mdm2)
04121 Ubiquitin system [BR:
cpla04121
]
122559328 (mdm2)
Enzymes [BR:
cpla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122559328 (mdm2)
Membrane trafficking [BR:
cpla04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
122559328 (mdm2)
Ubiquitin system [BR:
cpla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
MDM2/MDM4 proteins
122559328 (mdm2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
SWIB
Zn_ribbon_RanBP
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
122559328
NCBI-ProteinID:
XP_043564645
LinkDB
All DBs
Position
19:62968454..63045002
Genome browser
AA seq
457 aa
AA seq
DB search
MATNGSANCLGTSQDDQDQDCQVKPKPLLLKLLHFAGARSETFTIKEVMHYLGQYIMAKQ
LYDERQQHIVHCSDDLLSHLFGVQSFSIKEPRTLYAMLSKNLISVGHEDSINDLNLGEIT
NQLGGEDCLMTVIPNDGNACTSCNVSCSPATGRRSNCSDSDNDASPDEQFHTRRRKRHRS
DSISLHWDDLSLCLISKLRREHGNSESSDSPSHLDIHIGTEGEDSSDKFSVEFEVESVHS
EDYSDFSEDSQDQSDKEIYEVAIFEAADSDESTFVEEIDPEISEADYWKCSKCEELNPPL
PRHCHRCWSVCQDWLPDKPKLQFDKMQDEGIDVPDCKKPPLESKKSNCSDLISEASQCSE
SQETECSEPSTSGSFNCCSQEFEKESTGKGEKGELSTLGPLEACVICQARPKNGCIVHGR
TGHLLACYTCAKKLKKRNKPCPLCREPIQLVVLTYFS
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgaacggatcggcaaactgcctgggcacttcacaagatgatcaagatcaggac
tgtcaagtgaaacccaagccactcttacttaagttgctgcactttgctggagcacgaagt
gaaaccttcacaataaaggaggtaatgcactacttgggacagtacataatggctaagcag
ttgtatgatgaaagacagcaacatatagtacattgttctgatgatctgttgagtcacttg
tttggagtgcagagcttttcaattaaagaaccacgaacattatatgccatgctctcaaaa
aatttgatatccgtgggccatgaagattctataaatgatctcaatcttggagagattacc
aaccagcttgggggtgaagattgtctcatgacagtcattccaaatgatgggaatgcttgc
acatcatgcaacgtttcctgttctcctgcaacaggcagaagatctaattgcagtgactct
gataacgatgcctcacctgatgagcagtttcatactagacggcgaaagcggcatcgatct
gatagcatttctctccattgggatgatctgtctttgtgtctgataagcaaattgcgtcga
gaacatggaaacagtgaatcatcagattctcccagtcatctggatattcatattggtaca
gaaggtgaagactccagtgataagtttagtgttgagtttgaagttgaatcagttcactct
gaagattatagcgatttcagtgaggattcacaagaccaaagtgacaaagagatttatgaa
gttgccatttttgaagctgctgacagtgatgaaagcacctttgttgaagaaattgatcca
gaaatatctgaagccgattattggaaatgttccaaatgtgaagagctgaatcctccattg
ccacgacattgtcatcgatgctggtctgtctgtcaagattggcttcctgataaacctaaa
cttcagtttgacaagatgcaggatgaaggtattgacgttcctgattgcaagaagccacca
cttgagtcaaagaaatcaaactgttcggatttaatcagtgaggcatctcaatgctcagag
tcacaagaaactgagtgctcggaaccttctacttctggtagcttcaactgctgcagccag
gaatttgaaaaagaaagtacaggcaagggagagaaaggcgagttgagcactttgggacct
ttggaagcttgtgttatatgtcaggcacgaccaaagaatggttgtattgttcatggtagg
acaggccatcttctcgcttgttacacttgtgcaaagaaactgaaaaagagaaacaaacca
tgtcctttgtgcagagagccaatccaactggttgtattgacctactttagttaa
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