Chiloscyllium plagiosum (whitespotted bambooshark): 122559391
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Entry
122559391 CDS
T08871
Name
(RefSeq) interferon gamma-like
KO
K04687
interferon gamma
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03050
Proteasome
cpla04060
Cytokine-cytokine receptor interaction
cpla04217
Necroptosis
cpla04350
TGF-beta signaling pathway
cpla05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
122559391
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
122559391
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
122559391
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
122559391
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122559391
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
cpla03051
]
122559391
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cpla04052
]
122559391
00536 Glycosaminoglycan binding proteins [BR:
cpla00536
]
122559391
Proteasome [BR:
cpla03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
122559391
Cytokines and neuropeptides [BR:
cpla04052
]
Cytokines
Interferons
122559391
Glycosaminoglycan binding proteins [BR:
cpla00536
]
Heparan sulfate / Heparin
Cytokines
122559391
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IFN-gamma
GBP_C
MerR_2
Caps_syn_GfcC_N
Motif
Other DBs
NCBI-GeneID:
122559391
NCBI-ProteinID:
XP_043564775
LinkDB
All DBs
Position
19:40193392..40194927
Genome browser
AA seq
166 aa
AA seq
DB search
MILFTCFIIGMVSHVLSDSAGCAPPQLLDEQLTRLSQDFNINHPDVGNGGAIFTNMLMKY
KQIPEKNVILEAVLRSYLDLFKVLKQKSEVKDHISIVANSLNECATSAKYRMQNDLLNDL
KKLSNIKWDDQMVQRKAILELREVLNVVKDTGKKRRKRNMGRRPRI
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atgatactttttacgtgttttattattggaatggtcagtcatgtactttcagattctgct
ggatgtgcgcctccacaactattggatgaacaactaacacggttgagccaagattttaat
ataaaccatccggatgttggaaatggaggggcaatctttaccaatatgctaatgaagtat
aaacagatacctgaaaaaaatgttattttggaggctgtactgcgctcgtacttggactta
ttcaaggttttaaagcaaaaaagtgaagtcaaggaccacatcagcattgttgctaacagc
ttgaatgaatgtgcgacatctgcaaagtacagaatgcaaaatgaccttctcaatgatctc
aagaaattaagcaacatcaaatgggatgatcaaatggttcagcgcaaagcaatccttgaa
cttcgtgaagttctgaacgtagtgaaagacactgggaaaaaaagacgcaagaggaacatg
ggaaggaggccaagaatctaa
DBGET
integrated database retrieval system
