Chiloscyllium plagiosum (whitespotted bambooshark): 122560515
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Entry
122560515 CDS
T08871
Symbol
nthl1
Name
(RefSeq) endonuclease III-like protein 1 isoform X1
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
122560515 (nthl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpla03400
]
122560515 (nthl1)
Enzymes [BR:
cpla01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
122560515 (nthl1)
DNA repair and recombination proteins [BR:
cpla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
122560515 (nthl1)
Prokaryotic type
122560515 (nthl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
RecR_HhH
Ogg-HhH
HHH_8
Cdd1
CwfJ_C_1
Motif
Other DBs
NCBI-GeneID:
122560515
NCBI-ProteinID:
XP_043567130
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All DBs
Position
21:complement(8598602..8616745)
Genome browser
AA seq
376 aa
AA seq
DB search
MLAARDLKGPRPSALISQKVGIMATSPYFTSGVLTRNMSRRVWVARERDHHPGSNLAKSP
AVGRPAVGQPGLQIQADAVGAASSIRPGSSPIRGNARRQKRESLRTAGGSGRKLSRPQSA
SPEKDTNSKWEPKDWREQLDNIRKMREGRDAPVDHMGAEQCFDKTAAPEVMRYQVLLSLM
LSSQTRDQVTFAAMKQLRDHGLTVDNILKMDDKTLGELIYPVGFWRSKVKYIKQTTAILK
EQYNGDIPSSVSELLKLPGVGPKMAHLIMKLAWNNVSGISVDTHVHRITNRLKWVKKETK
TPEESRLALEEWMPRELWSETNWLLVGFGQQMCLPVNPRCTVCLNRDICPTAKNNLRKTN
PRLPPSSPLQPCQQQQ
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgttagcagcgcgagatttaaagggaccgcgaccctcagctctcatctcacaaaaagtg
ggcattatggctacctcgccttattttacatcaggcgtactgactcggaacatgagccga
cgggtgtgggtggccagggagcgggatcatcaccccggctccaacttagcaaagagccct
gccgttggcaggccggcagtgggccagcccggcctccagattcaagcagacgcggtcgga
gctgcctcatcgatccggcctggcagctctcctatacgcggaaatgcacggagacagaaa
agggaatccttgcggactgctggcggttcgggccgaaagcttagccggccgcagtctgct
tccccagaaaaggacacaaactctaaatgggagcccaaggactggagggagcagttggat
aacatcagaaagatgagggagggcagggatgcgcccgtggatcacatgggcgctgaacaa
tgcttcgacaaaactgcagcccccgaggtcatgaggtatcaagtgcttttgtcgctcatg
ctgtccagccaaaccagggatcaggtgacatttgcagcaatgaagcagctaagggaccat
ggcttgactgtggacaacatcctcaagatggatgataagacactgggagagcttatctat
ccagttggattctggaggagtaaagtgaaatacatcaagcagaccacagcaatcttgaag
gagcagtacaatggtgacattcccagcagtgtcagcgagcttctgaaacttccaggagtg
ggaccgaagatggctcatctcatcatgaagctagcctggaataacgtgtctggcatcagt
gttgacacccatgtgcatagaatcacaaatcgactgaagtgggtcaaaaaagagaccaaa
accccagaggaaagcagactggcgctggaagaatggatgccacgggagctctggagcgag
accaattggctgctggtgggctttggtcagcagatgtgcctgccagtgaatcctcgctgt
actgtatgtctcaacagagatatctgtcccacagccaagaacaatcttcggaaaacaaat
cccaggcttcctcccagctctccgcttcagccttgccaacagcaacaataa
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