Chiloscyllium plagiosum (whitespotted bambooshark): 122560577
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Entry
122560577 CDS
T08871
Name
(RefSeq) platelet-derived growth factor subunit A-like isoform X1
KO
K04359
platelet-derived growth factor subunit A
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04010
MAPK signaling pathway
cpla04020
Calcium signaling pathway
cpla04510
Focal adhesion
cpla04540
Gap junction
cpla04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122560577
04020 Calcium signaling pathway
122560577
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122560577
04540 Gap junction
122560577
09142 Cell motility
04810 Regulation of actin cytoskeleton
122560577
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cpla04052
]
122560577
00536 Glycosaminoglycan binding proteins [BR:
cpla00536
]
122560577
Cytokines and neuropeptides [BR:
cpla04052
]
Cytokines
Growth factors (RTK binding)
122560577
Glycosaminoglycan binding proteins [BR:
cpla00536
]
Heparan sulfate / Heparin
Growth factors/receptors
122560577
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF_N
PDGF
Motif
Other DBs
NCBI-GeneID:
122560577
NCBI-ProteinID:
XP_043567284
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All DBs
Position
21:17101006..17137567
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AA seq
227 aa
AA seq
DB search
MRATVYFMLGFCYLTCACTEEAEFPPELLEKLAHSDITSIRDLQRLLEIESVGDDDHTES
NLRSHSINAVKHEYTKRSAPIRRRRSIEEAVPAVCKTRTVIYEIPRSQIDPTSANFLIWP
ACVEVRRCTGCCNTGSVKCQPSRIHHRSVKVAKVEYIRRKPRLKEVIVRLEEHLECMCTL
LHSNSEYREHEGPFTSPKRFKGRNSEKIKKRKRKKLILAPDKDVFPT
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgagagccacggtttatttcatgctcggcttttgttacctgacctgtgcatgtacagag
gaagctgaatttccccccgaattgcttgagaagctggcacacagtgatattaccagcatc
cgcgatcttcagcgcctcctggagattgaatccgtaggggatgatgatcacacagaatct
aatttaaggtctcacagtattaatgcagtaaaacatgaatatacaaagcgttcagcacct
atacgcagaaggcgaagtattgaagaagctgttcctgcagtgtgtaaaacaaggactgtc
atttatgaaatacctcgcagtcagatagatcccacctctgccaacttcctgatatggcct
gcttgtgtggaggtcagacgctgcacaggctgctgcaacactggcagcgtcaaatgccag
ccctctcggatacatcatcgaagtgtcaaggttgcaaaagtggagtatataaggcgcaag
cccagattaaaggaggttatagtgaggttagaagagcacctggaatgtatgtgcacatta
ctacattctaattcagaatacagagaacatgaagggcctttcaccagcccaaagcgcttt
aaaggaagaaatagtgaaaaaattaaaaaacggaagcgtaaaaagttaatactggcacct
gacaaggatgtgtttccaacataa
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