Chiloscyllium plagiosum (whitespotted bambooshark): 122561285
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Entry
122561285 CDS
T08871
Name
(RefSeq) Hermansky-Pudlak syndrome 6 protein
KO
K20192
Hermansky-Pudlak syndrome 6 protein
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpla04131
]
122561285
Membrane trafficking [BR:
cpla04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
122561285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS6_C
HPS6
Motif
Other DBs
NCBI-GeneID:
122561285
NCBI-ProteinID:
XP_043568871
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Position
22:complement(45459622..45463042)
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AA seq
844 aa
AA seq
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MPPGPGGMRLRRLSGLSRYSRHQQLRELLRPGSGPSCREESQAQPHARLRCCSRRRLFLH
LPRDNRLLSFEPSPARGPAPSPLDRSFPGAEQLLEVLELERLGPGSGDPERPGSSSSSSA
ALITQHGRAEFWSCREAEGWQLLQAADLCSGPRARLLSAAWDGHSISWCEERPGPSATTQ
HCICSRSLGPGPGLTLGPVRNLMHNSPAYRLHAAGEVIYLLPSNCPTPGNTPSNCPTPSN
SPMHNLVKFILIWSPQEDTLTVTSLARGPLSIRRLLHEDYNFTRLVADVAGILPSLPSLE
IRAVCPCPTGLLLAEANGEVSLIQNDGTARLLCHLSQSLPAEGSMLMELCGTTLAFTLGR
TLQLVDTETGRLVEEATLEVQPLGLIPYWETGEIQLLAEDGIYSLGIHPSNSNIKSAFCS
RSSQGQEMLEQLVLEEACKYYQKRSLSRSRLTVQKLKSEAKFQAPLTLCSILQNEFYLRK
TGHYNQQTYIKLHSIMAGELQSYVNLEEAKSCLVNGSEIEVAAYIEEITEQEIQRLLHCQ
LDREALVYLNSIFNTFPREAWKAVKRTLHLHQNSEGSFSARATADLWRVILSPGLPPDQS
VNTNGAVPVFELICRLLYQFQPKWLPMFIELTQQHLATFRNYGGNESLENVPLYKRALSV
IPSACDGGVGDPTEIIIELLLCSKRPNAVIQAVRLLIERGMWQRAVEATNRFSQQGPLLK
KELFAAMLVQISQHRALDPYLEEIWELCPEDTTATDVLDIILGSVPSSCESGPYSSDGNQ
LTIGLLRPLLTKVLTRGEDQQWIGMAEGLKTMVFPPPTPPRQKKAVDQSNPLSVEPSMEA
SKTL
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgccccctggcccgggcgggatgaggctccgccgcctctccggtctcagtcgctactct
cggcatcagcaactgcgggagctcctgcgaccggggtccgggccgagttgccgggaggag
tctcaggctcagccccatgcccggctccgctgttgctcccgccgccgcctcttcctccac
ctgccccgggacaaccggctgctgagcttcgagccgagcccggccagaggcccggctccc
agccccctggacaggagcttcccgggggccgagcagctgctggaggtgctggagctggag
aggctgggcccggggagcggggacccggagagaccgggcagcagctcttcctcctccgcc
gccctcatcacccagcacggccgggccgagttctggagctgccgggaggccgagggctgg
cagctgctgcaggccgccgacctctgctccggtccccgggctcggctgctgtcggccgcc
tgggatggtcactccatcagctggtgcgaggagaggcccgggccctccgcaaccactcag
cactgcatctgcagccggagcctgggccctggccccggcctcaccctggggcctgtccgc
aacctcatgcacaacagcccggcttacagattgcatgcggccggcgaggtcatctacctg
cttcccagcaactgccccacccctggcaacacccccagcaactgccccacccctagcaac
agccccatgcacaacctggtcaagttcatcctgatctggagcccccaggaagataccttg
accgtcaccagcctggcccgaggacccctcagcatcagaaggctgctccatgaggactac
aatttcacgaggcttgtggcggatgtcgccggcatcttaccttccctcccgtcgctggaa
atccgggcagtctgcccctgtcctactgggcttctactggccgaggccaatggagaggtc
agcctaatccaaaatgatgggaccgcccggctcctttgccacctcagccagagcctgcca
gctgagggctcgatgctgatggaactatgtgggaccaccctggcctttacgttgggcagg
acactgcaactcgttgacactgagacaggtaggttggtggaggaggcaacactggaggtg
cagccgctgggcctcataccctattgggaaacaggcgagatccaactgctggcagaggac
ggcatttattccctcggtattcaccccagtaattctaacatcaagtcagcgttctgttca
agaagcagccagggacaggagatgttggaacagctggtcttagaagaagcctgcaagtat
taccagaaaaggagtttgagccgcagcagactgacagtgcagaagctgaaaagtgaggcg
aagttccaagcgcctctcaccctctgctccatcttgcagaatgaattctatctcaggaag
actggccactataaccagcaaacctatatcaaactgcacagcatcatggctggggaatta
caaagctatgtcaacttggaagaagccaagtcctgcttggtaaatggatctgaaattgag
gtggctgcttacattgaggaaataactgagcaggaaattcagaggctgctgcattgccaa
cttgaccgagaagctctggtctacttaaattccattttcaacacattcccaagggaagca
tggaaagctgttaaacggacactgcacctgcaccagaatagtgaaggatccttctctgcc
agagccacagctgacctatggagagtgatactgagcccaggtctcccaccagaccagtca
gtcaacaccaatggagcagttccagtttttgaactgatctgtcgtctgctgtaccaattc
cagcctaaatggctgccaatgttcattgagctgacacagcagcacctggccactttccgg
aattatggggggaacgagagtctggagaacgttcccctctacaagagggctttgtcagtc
atcccatctgcttgcgatggtggggtaggagatccaactgaaataatcatcgagctcctg
ctgtgcagcaagaggccaaatgctgtaatccaagcagttcgccttctgattgagcgggga
atgtggcaaagggcagtagaggccaccaacaggttctcccaacaagggcctctgctaaag
aaggagctctttgctgccatgctggtccagatttcccagcacagagctctggatccttac
ctggaggagatttgggagttgtgtcctgaggataccacggccacagatgtattggacatc
atcctgggatctgtgccctcgagctgtgaatctgggccatactctagtgatggtaaccaa
ctgacgatcgggctgctgcgaccactgctcactaaagtgctgacgcggggtgaagatcag
caatggataggcatggctgaagggctaaagacaatggtcttccctcctcccacacctccc
aggcagaagaaagcagttgaccagtccaaccctctgagcgttgagcccagcatggaggca
agcaagacattgtga
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