KEGG   Chiloscyllium plagiosum (whitespotted bambooshark): 122561361
Entry
122561361         CDS       T08871                                 
Symbol
smndc1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30 isoform X1
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
cpla  Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpla00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122561361 (smndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cpla03041]
    122561361 (smndc1)
Spliceosome [BR:cpla03041]
 Complex A
  U2 snRNP components
   U2 related factors
    122561361 (smndc1)
 Complex B
    122561361 (smndc1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    122561361 (smndc1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR SGF29_Tudor DUF2067 HisKA_3 Mac
Other DBs
NCBI-GeneID: 122561361
NCBI-ProteinID: XP_043569038
LinkDB
Position
22:57665948..57701576
AA seq 238 aa
MSDELAKQLASYKAQLQQVEAALSTDAENEDLLKLQKDLQEVIELTRDLLSNQPSVAAAN
ADNSANSIPSHKWKTGDKCMAVWNEDGQLYEAEIEEIDQENGTAAITFSGYGNADVLPLV
NLKPVEEGNDSEELGGDKPKSKKEMVAQQREYKKKKALKKAQRMKELEQEREEQKVKWQQ
FNNRAYSKNKKGQVKKSIFASPESVTGKVGVGTCGIADRPMTQYQDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcagatgaactggcaaagcagctggccagttataaggcacaacttcaacaagtagaa
gctgcattatctactgatgcagaaaatgaagatctccttaaattacaaaaggatttgcag
gaagttatagaactgaccagagacctgttatcaaatcagccttctgttgctgcagctaat
gcagataactcagcaaattccatacctagtcataaatggaagactggtgacaagtgtatg
gccgtttggaatgaagatggacaactgtatgaagcggagattgaagagattgaccaagaa
aatggtacagctgcaatcacattttctggatacggtaatgctgatgtgcttcccttggtc
aacctgaaacctgttgaagaaggaaatgattctgaagagctgggtggtgacaaacccaaa
tcaaagaaggaaatggttgctcaacagagggagtataagaagaagaaagcattaaaaaaa
gctcagagaatgaaggagcttgaacaggagcgtgaggaacaaaaagtaaaatggcagcag
tttaataacagagcctattccaagaacaaaaaaggacaggtgaagaaaagcatttttgcc
tcacctgaaagtgtgaccggaaaggttggagttggcacatgtggaatagcagacagaccg
atgactcaataccaagacacatccaaatacaacgtgcggcatcttatgccacagtag

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