Chiloscyllium plagiosum (whitespotted bambooshark): 122561787
Help
Entry
122561787 CDS
T08871
Name
(RefSeq) interferon regulatory factor 6-like
KO
K09446
interferon regulatory factor 5
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
122561787
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpla03000
]
122561787
Transcription factors [BR:
cpla03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
122561787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
122561787
NCBI-ProteinID:
XP_043569882
LinkDB
All DBs
Position
23:37179562..37228437
Genome browser
AA seq
485 aa
AA seq
DB search
MMAMQPRRIRLKPWLLAQVDSGQYPGLQWLDDQRKHFQIPWRHATRHIPTQDDENTIFKA
WAVETGKYHQGVDGPDPAKWKANLRCALNKSREFKLIYDGTKETPMQPYKIYQVCDLQQS
NGGNGTPEAIDCEVDDEEEQQLQVLFPSMTLEDKISLPPYPTQTWSKQELTVPDSCMNGR
LANPTLPQGDLSHANLDHSELSQPNLTHGGLIQPNVTPIAQGTLNPLSTQQVDQFPSMTT
SEMFINSLPLTDLDVKFQYRGKQMGSLITVSNPHGCRLYYGDLGPIPDQVELFGPITLEQ
VRFPSTDQVSHEKQRYYTNHLLDVMDRGLILEIHGQDIYAIRLCQCKVYWSGPCAIGAAG
PNPLEREKKIKLFSLENFLSELIMYQKGQTSVAPLYEIQLCFGEEWPDGKPKEKKLIMVQ
VIPVVARMMFEMFSGELSFDSGSICLQISNPDLKDNVVFQFKELHRLLQSQQGQGQWPVQ
PANLQ
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgatggcaatgcaaccacggagaattcgtttgaaaccatggcttttggcacaggtggat
agtgggcaatatccagggcttcagtggctggatgaccaacggaagcattttcagatccct
tggcggcatgctaccagacacatccccacccaggatgatgaaaacacaattttcaaggct
tgggcagtggagacgggcaaataccatcaaggtgttgatgggccagaccctgccaaatgg
aaagcaaacctccgctgtgccctcaacaagagcagggagtttaaactgatttatgatggc
actaaggagacccccatgcagccatataagatctaccaagtatgtgacctacagcagtcc
aacggaggaaacggcactccagaggctattgactgtgaagtggacgacgaggaagagcaa
cagctccaagttttgtttccatcaatgaccttagaagataagatcagcctaccaccatac
ccaacacagacctggtcgaaacaggaacttacagtgcctgattcctgcatgaatggaaga
cttgctaacccgacactcccgcaaggggatctttcccatgcaaatctagaccacagtgaa
ctctctcagcccaaccttactcatggaggcctcattcaaccaaatgttactccaattgct
caaggaactcttaatccactctcaacacagcaagtggaccagttcccctcaatgaccacg
tctgaaatgtttatcaactctctgccattgactgacctggatgtgaagttccaataccgg
ggaaaacagatgggatcgttgatcactgtcagcaaccctcatggctgccgtttatactat
ggcgatctaggccctatcccagaccaagtggagctctttggacccattaccctggaacaa
gtccgtttccccagtacggatcaagtctctcatgagaagcagcgatattacaccaatcac
ttgctggatgtcatggaccggggtctcatcctggagatccatgggcaggatatttacgcc
atccgtctgtgccagtgtaaggtgtactggtctgggccctgtgctattggagcagcagga
cccaatccccttgagagggagaagaagatcaaactcttcagtttggagaacttcctcagt
gaattgataatgtatcagaagggacagactagcgttgccccactttacgagatccagctc
tgctttggtgaggaatggccagatggcaaacccaaggaaaaaaagttgatcatggtgcag
gtgattccagttgtggcaagaatgatgttcgagatgttttcaggggagttgtcattcgat
agtgggagtatctgcctgcaaatctcaaacccagaccttaaggacaacgtggtgtttcag
tttaaagaacttcatcgattacttcagtcccagcaaggccagggacagtggccagtgcag
cctgccaatctacaatga
DBGET
integrated database retrieval system
