Chiloscyllium plagiosum (whitespotted bambooshark): 122562136
Help
Entry
122562136 CDS
T08871
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe-like isoform X1
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla00514
Other types of O-glycan biosynthesis
cpla04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
122562136
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
122562136
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cpla01003
]
122562136
Enzymes [BR:
cpla01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
122562136
Glycosyltransferases [BR:
cpla01003
]
Glycan extension
O-Glycan
122562136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Acb3
Motif
Other DBs
NCBI-GeneID:
122562136
NCBI-ProteinID:
XP_043570649
LinkDB
All DBs
Position
24:31619984..31674385
Genome browser
AA seq
444 aa
AA seq
DB search
MRLRWSANSKLCFLLSLTLCASLLLLMGLQQWGPSDLQLSRSLQPFRQTPRTLGNGTVDR
SLFKQEKRSEAASAGSSIADSSSAFKREDSRHQVAKSDKVLRTYIKAKGLQGFAKNSTVK
DQRGPGPWEKAAALPWDIAPHSRHNMQLSDIFIAVKTTRKYHKARLDLLYQTWISLVKEQ
TFIFTDGEDKELQAKAAVLGVHLKGDRMINTNCSAAHTRQALCCKMSVEYDKFIESKKKW
FCHVDDDNYVNIRSLVYLLSAYSHTQDVYIGRPSLDHPVEAAERVKSDGSTTVKFWFATG
GAGFCISRGLALKMSPWASFGNFISTAEKIRLPDDCTIGYIIEGLLEVKMIHSDLFHSHL
ENLQQIPPTIIPRQVTLSYGSLEMKRNVLRVQGPFTLADDPSRFKSIHCLLYHDAWCPVK
DSLTSTLPFNGRFQIHFPNIAIIL
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttacgatggagtgcaaacagtaaactctgtttcctgctctccctgactctctgc
gcctctcttctgctcctgatgggactccagcagtggggaccctcggatctgcagctctct
cgatccctgcagcccttcagacagaccccccgtacccttggaaatggaaccgtggacaga
agcctctttaaacaggagaaacgaagcgaagccgcttcagcggggagctccatcgctgac
tccagcagcgcatttaaaagggaggacagccgccaccaagttgcaaaatcggacaaagtt
ctccggacttacatcaaagcgaaagggctgcagggttttgcgaagaactcgacagtgaaa
gatcagcgaggtcccggaccctgggagaaagctgcagcgctcccgtgggacatcgcaccg
cacagcaggcataacatgcaactcagtgatatttttattgcggtaaaaactactcggaag
tatcacaaagcccgattggatctgctttatcagacctggatatcactagtaaaagaacag
acattcatattcacagatggagaggacaaagagttgcaagcaaaggctgctgtcttggga
gttcatttgaaaggagatcgcatgattaataccaattgctctgctgcacatacacgtcaa
gcgctttgttgtaagatgtctgtggagtatgacaaattcattgaatccaaaaaaaaatgg
ttttgccatgttgacgatgacaattatgtaaatattcgcagtttagtctacttattatcc
gcatactcgcacactcaagatgtttatattggtagaccaagtcttgatcatccagtggag
gctgcagagcgggtgaagagtgatgggtcgacgactgtgaagttctggtttgccacagga
ggagctgggttctgtatcagccgtggattggcactaaagatgagtccatgggccagtttt
ggaaactttattagcacagcagagaagatccgccttcctgatgattgtacaattggctat
atcattgaaggtctactagaagtgaagatgattcacagtgatctgttccactcgcaccta
gagaacctgcagcaaatcccaccaactattatccccagacaggtcaccttaagttatgga
agtttagaaatgaagcggaatgtactgagagtccaagggcctttcactttggcagatgat
ccctcaaggttcaagtctatacattgtctcctctaccacgatgcctggtgtcctgtcaaa
gacagtttaacctcaacgttaccttttaatgggagatttcaaattcattttcccaacatt
gcaattattctgtag
DBGET
integrated database retrieval system
