KEGG   Chiloscyllium plagiosum (whitespotted bambooshark): 122562672
Entry
122562672         CDS       T08871                                 
Name
(RefSeq) lysine-specific demethylase 2B isoform X1
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
cpla  Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:cpla00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    122562672
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cpla03000]
    122562672
   04121 Ubiquitin system [BR:cpla04121]
    122562672
   03036 Chromosome and associated proteins [BR:cpla03036]
    122562672
Enzymes [BR:cpla01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     122562672
Transcription factors [BR:cpla03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    122562672
Ubiquitin system [BR:cpla04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     122562672
Chromosome and associated proteins [BR:cpla03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    122562672
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     122562672
SSDB
Motif
Pfam: PHD_4 zf-CXXC F-box-like F-box JHD JmjC Cupin_8 LRR_At1g61320_AtMIF1
Other DBs
NCBI-GeneID: 122562672
NCBI-ProteinID: XP_043571650
LinkDB
Position
25:complement(25190265..25408596)
AA seq 1306 aa
MVPGADSGDFFFPFHFRPLPSNTTHKPLFAVLISEGNRPDIERTFCRRRYDNEDLSDDDI
ASMRTFDVEEKLSIASYNSSYVHFMKGKDFTLEYVQRETIKVPIIFRDKDGLGIKTPDSD
FSVRDVKLFVGSRRVVDVMDVSTQKGIEMSMSQWVKYYETPEMEREKLYNVISLEFSHTK
LENLVHRPNVVDLVDWVDNMWPRHLKEKQMDSTNAIAEMKYPKVQKYCLMSVKGCYTDFH
IDFGGTSVWYHILRGGKVFWLVPPTSHNLEIYEEWVLSGKQGDIFLGDRVDGCQRIELKQ
GYTFLIPSGWIHAVYTPVDTLVFGGNFLHSFNIPMQLHIYGIEDRTRVNAKFRYPFYYEM
CWYVLERYVFCLTKRSYLTKQYQRESMLIDTEKKPNTESPSSDSRLDMDEESSDVRIKEE
KDESRDKMSLQSTKAFGDDSPSPNSAHSEGNESSGKTPKMTKRLKRTLSNDSDDSTKSPM
LTDCPKTPSGSPDPSQPASEGSNKWIHLTEFELKGLKALVEKLESLPENKKCVPEGIEDP
YALLEDMKTVLEEHADDDQKLAITGVPIVTWPKKAVKHRAVGRPKGKLGTSAAVKLAANR
ATAGARRRRTRCRKCEACRRTECGECHFCKDMKKFGGPGRMKQSCIMRQCIAPVLPHTAV
CLICGEAGKEDTVEEEEEKFNFMLMECSICNEIVHPGCLKVKQLKVQDGDGVVNEELPNC
WECPKCNHEGKTGKVYKQKRGPGFKYASNLPGSLLKEQRQNREHKDSAETTKKKGDREEN
SKRRSEEHPKKRPEESVPRRKSEDGLVMRKRRITDRNSEPIAKKKFKIGKEEKLLRKKKK
SLQPSEDHPTIVKTLRTIKQEPEDDPPETPQKTKESDQSRSSSPRAGPSTESAEAKEKKS
ERFKEKRKKRLHNKELSKELSKELNQEIHKTETSLANENHQPIKSEGEGEKVEKPKRLPA
SSERLHRLSKGLNGTPRLRHHLTTSLRRAPRVITRPPPSVSPTKSIQMERHVVRPPPVSP
PPDSLPLDDGEDHVMQREVWMAVFGYLSRKDLCICMRVCKTWNRWCCDKRLWTKIDLNRC
KSITPLMLSGIIRRQPVTLDLSWTNISKKQLTWLINRLPGLKDLVVSGCSWAAISALCSS
SCPLLRTMDLRWVEGLKDAQMRDLLSPPTDNRPGQIDNRSKLRNVVDLRLAGLDITDATL
RLLIRHMPTLSRLDLSYCNHLTDQSINLLTAVGTTTRDSLTDVNLSVCNKVTDQCLTYFK
RCGNICRIDLRYCKQVTKEGCEQFIAEMSVIVQFNLSEEKLLQKLS
NT seq 3921 nt   +upstreamnt  +downstreamnt
atggtgccgggggcggactctggggatttttttttccccttccattttcgaccccttcca
tcaaacacaacacacaaacctctctttgcagttctcatttcagaaggaaatcgacccgac
atcgaacgcacattttgtagaaggcggtatgacaatgaggacctctcagacgatgacata
gccagcatgaggacttttgatgtggaggaaaagcttagtattgcctcatacaattcaagt
tacgtgcactttatgaaaggaaaagattttacccttgaatatgtgcagagagagactatc
aaggtccccattatcttcagggacaaagatggtctaggaatcaaaacaccagatagcgat
ttcagtgtcagagatgtaaaactatttgttgggagtcgccgtgttgtggatgtcatggat
gtgagtacccagaaaggaattgagatgagtatgtcacaatgggttaaatactatgaaaca
ccagaaatggaaagagagaagctgtataatgtcatcagcctggaattcagtcatacaaaa
cttgagaatctggtccatcggcccaatgtggtggacctggtggattgggtggacaacatg
tggccacggcatttaaaagagaagcaaatggactccacaaatgcaatagcagaaatgaaa
tatccaaaagttcagaagtactgcttaatgagtgtcaaagggtgctacacagattttcat
attgattttggtggcacttctgtctggtatcatattcttcgaggagggaaggtattctgg
ttagttcccccgacttcgcacaatctggagatttatgaagagtgggttctgtcgggaaaa
caaggtgatattttccttggggacagagtggacggatgccaacggattgagttaaaacaa
ggatatacatttttgatcccttcaggatggattcatgccgtatacactccagtagatacg
ttggtttttggtggaaatttcctgcacagctttaatattcctatgcaacttcatatctat
ggaattgaggatcgaactcgggttaatgccaagttccgctatcctttctactatgaaatg
tgctggtatgtcctggaaagatatgtgttctgtttgacgaaaaggtcttatctcaccaaa
caataccagagggaatcaatgttaattgatacagagaagaaaccaaatacagagagtcct
tcatcagattcccgtctagatatggatgaagaatcttctgatgtacgaatcaaggaggag
aaagatgagtcgagagataaaatgagccttcaaagcacaaaagcatttggtgatgattcg
ccatctcctaacagtgcacattcagaaggaaatgaaagctctggaaagacaccgaaaatg
acaaagcgtttaaagcggactttgtccaatgattcagatgacagcactaagtcaccaatg
ctgacagactgtccaaaaacaccaagtgggtctcctgacccatctcagccagcatctgaa
ggatctaataaatggattcaccttacagaatttgagttgaaaggattaaaagcacttgtg
gaaaaactggagtctttgccagagaataaaaaatgtgtccctgaagggatagaagatcct
tatgcccttctagaggatatgaagacagtactggaggaacatgctgatgatgatcagaag
ctggctatcaccggggtcccaattgtaacatggccaaagaaggcagtgaagcatagagca
gtaggaaggccaaaaggaaagcttggaacttctgcagctgtgaagcttgctgcgaacagg
gctacagctggagcgcgcaggaggagaacaaggtgtcgaaaatgcgaggcatgccgaaga
acagaatgtggggagtgccatttctgcaaggacatgaagaagtttggaggaccagggaga
atgaagcagtcctgtatcatgaggcagtgcattgctccggtcctgccacatacagcagtc
tgtctcatttgtggagaagcaggaaaggaggacactgtggaagaagaggaggaaaagttc
aattttatgctgatggaatgctcaatttgtaatgaaattgtgcatcctggctgcttaaag
gtaaagcagttaaaggtacaggatggtgatggagttgtcaacgaagagcttccaaactgc
tgggaatgtccaaagtgtaaccatgagggaaagacagggaaagtctataagcagaaaaga
gggccagggtttaagtatgcctccaacctcccgggttcactattgaaggagcagaggcag
aacagagaacacaaggactctgcagaaacaacaaagaaaaagggagacagagaggaaaat
tccaaacggaggtcagaggaacatcccaagaaacgacctgaagaatctgttccaagaagg
aaatctgaggatgggcttgtgatgcggaagcggagaattactgatagaaattctgagcca
attgccaaaaaaaagtttaaaattggaaaggaagagaaactgttgaggaagaagaaaaaa
tccttgcagccaagtgaagatcacccaacaattgtcaaaacattgcgaactatcaagcag
gagcctgaagatgatccaccagagacacctcagaaaacaaaggagagtgaccagtctagg
tcaagctctccaagagctggtcccagtactgaaagtgcagaggccaaagaaaagaaaagt
gagaggtttaaagagaaacgcaagaagcgattgcacaataaagaacttagtaaagaacta
agcaaagaactcaatcaagagattcataaaactgagaccagcctggcaaatgagaatcat
caaccaattaaatctgaaggagagggtgaaaaagtagagaagcctaaacgactgccggca
agcagtgaaagacttcacagattaagcaaaggattaaatgggactcctaggcttaggcat
caccttaccacgagcttgaggcgggctcccagggttatcactagacccccaccctctgtg
tcaccaactaagtccattcaaatggagagacatgttgtgcggcctccccctgtcagccca
cccccagactctctgccccttgatgatggtgaagaccatgtcatgcaacgagaagtgtgg
atggctgtgtttggctacctcagtagaaaagatttatgcatttgcatgagagtctgtaaa
acctggaacagatggtgctgtgacaagaggctttggaccaagattgatttaaaccggtgt
aaatcgatcacacctcttatgctcagtggcatcattaggaggcagcctgtaacccttgac
ctgagctggacaaatatatcgaaaaagcagttaacttggcttatcaacagattgccaggt
cttaaagacttggttgtttcaggctgctcctgggcagcaatctctgcactttgcagctct
agttgtccattgctgagaactatggatcttagatgggtggaaggattaaaagatgcccaa
atgagagatttgctttctcctccaacagacaacagaccaggtcaaattgacaatcgcagc
aagctacgaaatgtggtagaccttcgtctggctggactggacattacagatgcaacactc
cggcttcttattagacacatgccaacattatccagactggaccttagttactgcaatcat
ctgacagatcaatcaattaacctattaacggcagttggcactacaactagagattcctta
acagatgtcaatctatcagtttgcaataaagtcactgaccagtgcctaacctatttcaaa
cgttgtggtaatatctgccgaatagacctccgttactgcaaacaggtaacaaaagaaggt
tgtgaacaattcatagcagaaatgtctgttattgttcagttcaatttgtcagaggaaaaa
ctcttacaaaaactcagttaa

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