Chiloscyllium plagiosum (whitespotted bambooshark): 122563231
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Entry
122563231 CDS
T08871
Name
(RefSeq) plakophilin-1-like
KO
K10387
plakophilin 1
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cpla04812
]
122563231
Cytoskeleton proteins [BR:
cpla04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
122563231
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Arm
HEAT_2
HEAT
ELMO_ARM
V-ATPase_H_C
Adaptin_N
Arm_2
ARMC9_ARM
Cnd1
Sgf11_N
Motif
Other DBs
NCBI-GeneID:
122563231
NCBI-ProteinID:
XP_043572765
LinkDB
All DBs
Position
26:32226835..32287843
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AA seq
846 aa
AA seq
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MDRNLLTCLLRDSISHTTTAFSLYKSRFMQTSPSNTLGLIDSRTNQTDVSTQALTLHEQS
AGRGQAAVFESLGKVDKQVESNSAQLQSDYNHQRGRENNNINMAYVKTVTAGECFSNQSN
STLALPPADKLSTLARMDSEKRVGSQVRMMMENKRNQQRSVKKELANGQWNMNQREIFDF
GNSFRSMTIKNQGTQRRKGSQYDGTMKEFSSTETYATGVPREYQQKSHFSSFSVKGKRTI
SMPSHYRKHSGPQSPMGDNEVFYRQMASSRSEPDLLNMQNTQTIRRLRSKYRPPDRTKSL
YARRSIIHTSSMLPDTKSQEKERLNLQASRIQSTKRGSTIYRTANGIRDFDSSMNLKKAV
MLLSDQDPSILAYAASYIQHECFKEDTAKTAISEMKAIPQLINLLGIKNNNVQQSVCGAL
RNAVYKNVNNKLEVKKNGGIKPILQILRETNDLETQKQITGLLWNLSSCDELKDVLIKEA
LPALTESVIIPHTSEEYGNPRINDPEVFYNATGCLRNLSSAGQEGRQLMRNCNGLIDSLM
TYTQTCINANQVDAKSVENCVCILHNLTYHLDTEVPAVFSHINAKGNVQSQNRTTKKSSV
GCFSPGSDQFDEPDLDNMPFPKEDDNPKGVNNLSHSKAIKMYTSLLGKSKSDATLEACAG
ALQNLTASNKMSSYLMSSNIVNKERALPRIANLLQSSNPDIQKTAVSLLNNMSRHNSLQP
DLASQTLPELARLLPGGGNSSKTSDDTIASACNIMRNLVPNNTAIAKTVLQGSMLNNLMS
LSKSSAYPSAGKAACLFLYEMWAQKDLQNFFKREGFSKKDFVNHLTSAAVKLAQQNAGRI
PSKKFL
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atggatagaaatttattaacctgcttgctgcgtgactcaatctcacacacaactacagca
ttttccctttacaaaagtcgcttcatgcaaacaagcccttcaaatactctgggcttgatt
gacagtagaaccaaccaaacagatgtgtccacccaggcgttgactcttcatgagcaaagt
gctgggcgaggccaggcagccgtgtttgaaagtctggggaaggtggacaaacaagtggaa
tcaaacagcgcacagttacagagtgattacaaccaccagcggggtcgcgaaaacaataac
ataaacatggcttatgtgaagacagtgacagccggggaatgttttagcaatcagtctaat
tctacattggctctgccacccgccgacaagctcagcacattggcccgaatggacagtgag
aagagagtgggcagccaggtgcgcatgatgatggagaataagcgaaatcagcaaaggtct
gttaaaaaagaattggcaaatggtcagtggaacatgaaccaaagagagatctttgatttt
ggaaattcatttcgaagtatgaccatcaagaatcaaggaacgcaaaggcgcaagggttca
cagtatgatggcaccatgaaagaattttccagcacagaaacttatgcaacaggagtccca
agagaataccagcaaaagagccattttagctcctttagtgtgaaggggaaacgaacaatc
agcatgccatcacattatcgaaaacattctggtccacaaagtccaatgggtgacaacgaa
gttttctacagacaaatggcaagcagtcgaagtgaaccagatctcttaaatatgcaaaat
acacagactataagaaggctgagaagcaagtaccggcctccagatcggaccaagagcctt
tatgcaaggcgaagtattatccacacttcttcaatgctcccagacactaaaagtcaggaa
aaagaaaggttaaatttacaggcttcaaggattcaaagtactaaaagaggaagtactatt
tatagaacagcaaatggaatacgagactttgacagcagcatgaatctaaaaaaagctgtg
atgcttttatccgatcaggatcccagcattttagcctacgctgcttcttacattcagcat
gagtgctttaaggaggacacggctaaaacagcgatttctgaaatgaaagcgattcctcaa
ctgatcaacctcttgggaatcaaaaataacaacgttcagcaatctgtctgtggagctctt
cgaaatgcagtttacaagaatgtcaacaacaagcttgaagtaaagaaaaatggtgggatc
aaaccaatccttcagatcctgagagaaacaaatgatctggaaacacagaagcaaataact
ggactcttatggaatctttcatcatgtgatgagctcaaggatgtcttgattaaggaggcc
ctgccagccctgactgagtctgtaattattccacatacttctgaggaatatggaaatccg
agaatcaatgatcctgaggttttctacaatgctacaggatgtctaaggaacctgagctct
gctggccaagagggtcggcagttgatgcgcaactgcaatggattaattgattctctcatg
acttatactcaaacgtgtatcaatgcaaaccaagttgatgcaaagtctgttgaaaactgt
gtctgcatcctacataacctcacataccacttggatactgaagtaccagctgtgttcagc
cacattaatgcgaaaggaaatgtgcaaagccaaaacagaacaacaaagaagtcctcagtg
ggctgtttcagccctggaagtgatcagtttgatgagcctgatttagataatatgcctttc
ccgaaagaggatgacaaccctaaaggtgttaacaacctgtcacattcaaaagcaatcaaa
atgtacacatcccttttgggtaaatccaagtctgatgccacattggaagcttgtgctgga
gctctgcagaaccttaccgccagcaacaaaatgtcatcatacctgatgagttcaaacata
gtgaacaaagaaagggcactccctcggatcgccaaccttctccagtcgagcaacccagac
atacagaaaactgcagtttcattgttgaacaacatgtccaggcacaatagtcttcaacca
gatttggcatctcagacattgccagagttagcacgacttcttcctggaggaggtaatagc
tccaagacttcggatgacaccattgcttccgcctgtaatattatgcgaaatctggtgccc
aataatactgccatagcaaaaacagtactacagggttcgatgttgaataatcttatgagc
ctcagtaaatccagtgcctacccctcagctggtaaagctgcctgtctcttcctctatgaa
atgtgggcgcagaaagacttgcagaatttcttcaaaagggaaggttttagcaagaaggac
tttgtaaatcacctgacatcagccgctgtcaaattagctcaacagaatgcggggaggatc
ccaagcaaaaaattcctttaa
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