KEGG   Chiloscyllium plagiosum (whitespotted bambooshark): 122564136
Entry
122564136         CDS       T08871                                 
Name
(RefSeq) lysine-specific demethylase 2B-like isoform X1
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
cpla  Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:cpla00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    122564136
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cpla03000]
    122564136
   04121 Ubiquitin system [BR:cpla04121]
    122564136
   03036 Chromosome and associated proteins [BR:cpla03036]
    122564136
Enzymes [BR:cpla01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     122564136
Transcription factors [BR:cpla03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    122564136
Ubiquitin system [BR:cpla04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     122564136
Chromosome and associated proteins [BR:cpla03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    122564136
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     122564136
SSDB
Motif
Pfam: PHD_4 zf-CXXC F-box-like F-box LRR_4 LRR_At1g61320_AtMIF1
Other DBs
NCBI-GeneID: 122564136
NCBI-ProteinID: XP_043574686
LinkDB
Position
28:complement(41113455..41276888)
AA seq 741 aa
MALSPDDEDYDTSQSRASARLKPRPTPSSGPKILVHKSTSGARRRRTRCRKCEACQRSEC
GECHFCKDMKKFGGPGRMKQSCLKRQCIAPVLPHTAVCKICGEAGKEDNVVDEAEKFNSS
LMECSICNEILHPGCLKVEESEGLINDELPNCWECPKCNQEGKTGKKRGPGFKFASNLPG
SLLKEFKEGEDGGRRKSEDLGRPKVEEYHPNRRKSDDGLGLKRRKEKDLPTDLGPSKKLR
GGKDDKLLKRKKRKTTPDSEECTKANHLERSADAERIERIRQMMKRVNRNEATSSSSSSD
SDSNSSSGSDSSLERSTGSSGGSSPRSVAKADNQRSKLRRLSNDIFSEEDDEEEEEDDEE
NAKSVKTNSLLASKERENNYYSLRGESMKRNSFRTVEVSLKKKNGPSSQFCHKVLGGLPR
PPILSKVSVQSPPKPFQMERHVVRPPPDSPEPDSLPLAGGSKHVMHREVWLAIFRYLSHK
DLCICMRVCKTWSKWCCDKRLWTTINLSGCKSITPTMLSGIIRRQPIVLNLSWTNISKKQ
LSWLINKLQNLQILALAGCIWSAISALCTASCPLLHMLDLRWVEDLKDSQMKELLSPPTD
CRGGQNNDQSKLWNLTEFHLAGLDITDISLALMTRHMPMLNKLDLSQCNHLSDQSIAILT
APGSSIRETLTEIDLSGCNGITDQCLSLLKDCPNLTLIDFRNCKLISPQACQHLVEGLSD
VAPFELLEDKLLKRRSLQLTK
NT seq 2226 nt   +upstreamnt  +downstreamnt
atggcactgagtcctgatgatgaagattatgacacctctcagtccagggcctcagcaaga
ctaaaaccacggcctaccccatcatcaggacccaaaatacttgtccataaatcaacaagt
ggagcgcgcagacgcaggacacgatgtcgcaaatgcgaggcttgccaacgctcagagtgt
ggcgaatgccacttctgcaaagacatgaagaagtttggaggtcctggcagaatgaagcaa
tcctgtctcaagcggcaatgtattgcacccgtactaccacatactgcagtctgcaagatt
tgcggtgaggcaggaaaggaagacaatgtggtggatgaagcagagaaatttaattctagc
ttaatggaatgctccatctgcaatgaaatattacacccaggatgtctgaaggtggaggag
tctgaagggcttataaatgatgagttgccaaattgctgggaatgtccaaaatgtaaccag
gaaggaaaaacaggcaaaaagagaggccctgggtttaaattcgcctccaatcttcctggg
tctctcttaaaggagtttaaagaaggtgaagatggagggagacgaaaatctgaagaccta
ggacgtccaaaagtggaggaatatcatcctaacagaaggaaatctgatgatggtctggga
ctcaaacgaagaaaagaaaaagatttaccaactgatttgggtccaagtaaaaagctaaga
ggtggaaaggatgacaaacttctaaagcggaagaaacggaaaacaactccagattctgaa
gaatgcactaaagcaaatcatcttgaaagatcagcagatgcagaaagaatagaacggata
cgacaaatgatgaaacgtgtcaaccgaaatgaagcaaccagctctagctctagttctgat
tcagactccaattcaagttctggttcagattccagcttagagagatcaacaggaagtagt
ggtggatctagtccaaggtctgttgcaaaggctgataaccaaaggtccaagctcagaagg
ctttctaatgatatttttagtgaggaagatgatgaagaggaggaggaagatgatgaagag
aatgcaaaaagtgtaaaaactaattcgcttttggcctcaaaagagcgagaaaataactat
tattccctgagaggggagagtatgaaaagaaactcctttaggacagtggaggtttcattg
aagaagaaaaatgggccatctagccaattttgtcacaaagttctaggaggtttgcctcgt
cctccgatactaagcaaagtctctgtgcagtctcctcctaagccatttcaaatggagcgg
catgtggtgcgacctccacctgatagtcctgagcctgattcgctaccattggctggtggc
tcaaaacatgtgatgcatcgggaagtgtggctggcaatattcaggtacctcagccataag
gatctgtgcatctgtatgagagtgtgcaaaacctggagcaaatggtgttgtgacaagcgg
ttgtggaccacaattaacctgagtggctgcaaatcgatcactccaactatgctgagtggg
atcatcaggagacagcctatcgtactgaaccttagctggacaaacatatcgaaaaagcaa
ctcagttggctcataaacaaattacagaatttgcaaatcctagcactagcaggttgcatt
tggagtgcaatctctgcactttgtacagcgagctgtccccttctacacatgcttgatctt
cgctgggtggaggacctcaaagactcccagatgaaagagttgctttcaccgcctacagat
tgcagaggaggtcagaacaatgatcagagcaaactctggaacctgacagaatttcactta
gctggtctggacatcactgacatctcgctggcactgatgacccgtcacatgccaatgttg
aacaagctggatctcagccagtgcaaccacttgtctgatcaatccattgccatcctgaca
gcgcctggctcatctatacgggaaacactgactgaaattgacctttcaggttgcaatgga
ataacagatcagtgcctatcgctgcttaaagactgcccaaatcttactctaattgacttt
cggaattgcaaactgatttcaccccaagcttgtcagcaccttgtggaagggctgtcagat
gttgccccctttgaactcttggaagacaaactattaaagaggagaagtttacaattgaca
aaatag

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