Chiloscyllium plagiosum (whitespotted bambooshark): 122564311
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Entry
122564311 CDS
T08871
Name
(RefSeq) tumor necrosis factor alpha-induced protein 3-like
KO
K11859
tumor necrosis factor, alpha-induced protein 3 [EC:
3.4.19.12
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04217
Necroptosis
cpla04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
122564311
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
122564311
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cpla01002
]
122564311
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpla04121
]
122564311
Enzymes [BR:
cpla01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122564311
Peptidases and inhibitors [BR:
cpla01002
]
Cysteine peptidases
Family C64
122564311
Ubiquitin system [BR:
cpla04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
122564311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-A20
OTU
Motif
Other DBs
NCBI-GeneID:
122564311
NCBI-ProteinID:
XP_043574917
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Position
29:complement(48642678..48679130)
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AA seq
801 aa
AA seq
DB search
MERTGILPYTLSDSNLMKAVKLRAVISEDIVRPTSAKPFIHHLNKLHEYTLQLCSTRGYQ
RRFRRMVEQALFDEEIYQTLQKARVLNWCREVRKQFPLKVPGEGNSLLHSISLYMWGVPD
TDLVLQKTFHEALVKAHDANFKLRFQTEYRTDQGFLDPALLHQPKIWDQEWQNVIESSNP
GSPAGHPLANIYQDVHIFVLANIVRRPIVVVVGNSKGSSKSVSERMTSSPAGIYLPLHWP
PHLCYSYPILLSYAHQYFTPLISVNDVGPEINAFPLAVPSEQGSVEIPIRFLLDAEKCDR
KQVLSSYLIVVTLPDCYGGTFADAVRLYINPLPDDLNLVQDYFQLVNHQYKFWQQNTDKE
RSGRNEDGLAFLSNLSIVGDKCLTPGCTYFCSKFTKPFCHTCRDAFRKTDVSSGANNCKQ
SDGQGDNVKELESRGTTLHGLKDIRKTPSTPLQPAPPLSAHSPFCSENNALKCKTSHCPF
TGNVTMNGLCPSCFQERSGHIPEEGSNSYPKAEGEFVEEEMDLWGERCNSCKQVIRTFNG
LCFPCSEMRDSLSKSQSRTKQTPSGSLQAAVAKIGNYGPLVPQGQRQTFSQLGESAKCKN
QNCQYFGTEEQNGFCTTCFFRYVEEIGASAQQDPNQHVNHSPTAPNGNLAQISSHLKNMS
VCSKAECSMLANPVYSGYCEKCYVYVQSKHAQRIKSGRDIPADQHIWSPVLPRCHNYNAS
NDQGLSDRTTNELFEVELVTSSNSSSGHLQSSQIRTFSSSDQQNLETRRKLCRTQDCENF
GNAKCDGYCNACFTTLQLHRK
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggagaggaccggcatactgccgtacacactgtcagacagcaacttaatgaaagcggtt
aaactgcgggctgtaattagtgaggacatagtgagaccgaccagcgccaagcccttcatc
catcatttgaacaaactgcatgagtacacgctgcagttatgtagcaccagaggataccag
cggagattccgcaggatggtggagcaggcgctgtttgatgaggagatctatcagaccctc
caaaaagcccgagtcctgaactggtgcagggaggtcaggaagcaatttccactcaaggtt
cctggagaagggaatagtctcctacactctatctcactgtacatgtggggtgttccagac
acagaccttgtcctgcagaaaaccttccatgaggcattggtgaaagcacatgatgcaaac
ttcaaattaagatttcagacagaatacagaacagaccagggatttctcgatccagctctg
ctgcatcagcctaagatctgggatcaagaatggcagaatgtgattgaatcttccaatcct
gggtctcctgcaggccatcctttggcaaacatttatcaggatgtccacatctttgtgtta
gccaacattgtcaggagacctattgttgttgttgtaggaaactcaaaaggaagttccaaa
agtgtttcagagaggatgacatcgagtccagctgggatttatctgcctttgcactggcct
cctcatctctgctactcttaccccattttgctcagctatgcacatcaatatttcacacca
ctcatcagtgtcaatgatgtaggaccagaaatcaatgcttttcccctggccgttccgagt
gagcaggggagtgtggagattccgattcgctttctgcttgatgctgaaaaatgtgacagg
aagcaagtactgagcagttatctgattgtggtgactctgccagattgttacggtgggaca
tttgcagatgcagttcggttgtatataaatcctttgcctgatgatcttaacttggttcaa
gattatttccagctggttaatcaccaatacaaattctggcagcaaaacacagacaaagaa
aggagtgggagaaatgaagatgggcttgctttcctctctaatctgtctattgtgggagac
aaatgtttgactcctggatgcacgtacttttgctcaaaattcacaaagccgttctgtcac
acatgtcgtgatgccttccgaaaaacagatgtgtcttcaggggccaacaattgtaaacaa
agtgatggccaaggagacaatgtgaaggagttagagtcccgaggtacaacactccatgga
ttgaaagacatcaggaaaaccccatcaactcccctccaaccagcaccaccattgtcagcg
cacagtcctttctgcagtgagaacaatgccctcaagtgcaaaacatctcattgtccattc
actgggaatgtgacgatgaatggactttgtccaagttgcttccaagaaagaagtggccac
attccagaggaaggcagtaattcttatccaaaagctgaaggtgaatttgtggaagaggag
atggatttgtggggagaaagatgcaacagttgcaagcaagtgataagaacattcaatggt
ttatgtttcccttgctcagagatgagggattctctctcaaagtcacagagcagaaccaag
caaacaccttcggggtcactgcaagctgccgtggccaagattggtaactatggaccactt
gttccacaggggcagagacagacgtttagtcagctgggtgaatcagcaaagtgcaaaaat
caaaactgccagtactttgggactgaagaacagaatggattctgtaccacgtgtttcttt
agatacgtggaagaaattggagcgtctgctcagcaggatccaaaccagcacgttaatcat
tctccaactgcacctaatgggaaccttgctcagatttcatcccaccttaaaaacatgtca
gtttgttctaaagctgagtgtagcatgcttgccaatccagtgtatagtggatattgtgaa
aaatgctatgtttatgttcagagtaaacatgcacaaagaatcaagtctggcagggatatt
cctgcagatcaacacatttggagtcctgtgctgccaagatgtcacaattataatgcatca
aatgatcagggattgtctgacagaacaaccaatgaactctttgaggtggagttagtgaca
agcagcaacagcagcagtggtcatttgcaatcttcacagattcgcactttctcatcatca
gatcaacagaacttggagacaaggagaaagctttgtagaactcaagactgtgagaacttc
gggaatgcaaaatgtgatggttactgtaatgcttgtttcaccaccttacagctgcacaga
aagtag
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