Chiloscyllium plagiosum (whitespotted bambooshark): 122564486
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Entry
122564486 CDS
T08871
Symbol
fyco1a
Name
(RefSeq) FYVE and coiled-coil domain-containing protein 1 isoform X1
KO
K21954
FYVE and coiled-coil domain-containing protein 1
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
122564486 (fyco1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpla04131
]
122564486 (fyco1a)
Membrane trafficking [BR:
cpla04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
122564486 (fyco1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FYVE
RUN
GOLD_2
Motif
Other DBs
NCBI-GeneID:
122564486
NCBI-ProteinID:
XP_043575372
LinkDB
All DBs
Position
29:31889310..32075523
Genome browser
AA seq
1539 aa
AA seq
DB search
MAVPVGESQIQRIIRDLKDAISELNREHKENGEPITDDSTNLHKCCLKLEYLLQFDQKER
TTFLGTRKDYWDYFCNCLAKVKGANDGIRFVKSIPELKTSLGKGRAFIRYSLVHQRLADT
VQQCLMNVKVTSDWYYARSPLLISHLGSDIIDHLYELNEVQFDLASRGHDLDASWPTFAR
RSFSLSHSPSHLWKPPSRCSSVSSLISNYSQAPDSLLNPEINNPLMAEQLETFDELRAEL
DQSDIKQREMQEKIQQMELEKEQLQRTITLNEQTAEAMKKSTAHTMEENHKLKQMLEELN
QNFAGSAFAQEIVKEFQKSLQILEDGSIEKQKELQRKVLELEDCTAKFQSLTQELERIRI
SEETKTGIVNELQTKLIAAEQKNAELLARIDSILTEKGQLTATHYDSAQKIQELLDKLNE
AEWEEIGLQRLSSIQQSQLNKLKNDLESKESLINELELKLQEAASNLQEKNAILANKDEE
IESTLNKLKEIKNVQEMDTTDLESGQKSVQELRKEQEEMQIKYKELKITLEEQANTLSNN
LKAKESELTAAHNQVQNLLEIQNTLLGEKEDLTKKTQDLEEMLAKLKTRTEDLNVEYQKL
QVEREKHHQVVQKHVEREEELEKVCLTLETEIDKLNASEMQLQGQIADAMVTVDEKETRL
REENRQLNEKLQCALRQVKRAEAKLEKNQVEFDDLKAEKNKLNDCLLNLQGCCQAKGELI
SDLQNKLVESKQNEHALVSLLDKKEGALLEKVSALKEFSEKIEKSQVAIEALEREKLNLE
SNFKQQMALSESLVLEQNAVVEAQLQARELQEKEMQEINAKLISIKNQLEIQLAEVTRFK
AESEELKSKLKQALEEKESICSNLKLSVSSKEEYRALVQNLKEQIQSINHDHAEKLLLIK
EKEDCLKNEREKSVQQVIELEEQLLTAKEELSQLKQYIEKIDLENVETKDLLHRMNTEIA
ELGMQICTLSAEKADAEKKYIEVSQQQIAFCEEVKAEQNQLNLDVSKLKSEKEQLLEELR
RSKESETTIKELQRNLAQAQQQAKGCQEAAREELSAVKFQMSGEMMDYQNKLKTVNEELE
AVKKDLNGRQTQIMSINKQLVEVQDCNRKLMDEVEQKEQTIVDSQLLRNEKEEKLRSLSE
NLISTQQELENVKKELEDYKTHLQKTQEETERNEQKLVAELADLNRTKEFLEERLIELIK
DKDALWQKTDALEFEQKLRAETRWLGDKEVNHCLDCQSQFTWWLRRHHCRLCGRIFCYYC
SNNFVMTKHSGKRERCCRACYTEHNAVVQRLNDPGSSSTPNSPDESPSRSASEGPTSRNT
ESFTKPDDATFDIITDEELNEIDDNDYSLELGNQLLATQSESTMPIVHSLSPTCDNASEP
SIPPEDGSAQPMQDAEITLLKCGEITLKIPLKLDEIKEFGDHSRELFVKASCYSLIPIGV
EECGLTISWIFSSDPKSISFSVVYQESEQTPYEQCKVLIPLTRCNSHKETIQGQLKVRNP
GLYLLIFDNSFSRFTSKKVLYHLTVEKPIVYDGSDASEP
NT seq
4620 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcctgttggagaaagccaaatccaaaggataatccgagacctaaaggatgca
atttcagaattaaatcgagaacacaaggaaaatggtgagccaatcactgatgacagtacc
aacttgcacaaatgctgcttaaaactagagtacctccttcagtttgaccagaaggagaga
actacttttctcggcaccaggaaagactactgggattacttctgcaattgtttagccaag
gtgaaaggagctaatgatggaattcgctttgtgaagtctatcccagagctgaaaacctct
cttgggaaaggtcgagcatttattcggtattccttggtccatcaacgcctggctgatacg
gtccagcaatgcttgatgaatgtaaaagtcacaagtgactggtattatgcccgaagtcca
ttgctaatatctcatctcggttctgacattatcgatcacctctatgagctgaatgaagtg
cagtttgacttggcttctagaggacacgatttggatgcttcttggccaacattcgcacgg
aggtctttcagtttatctcattctccatcgcatctttggaaaccaccaagtagatgttca
agtgtaagcagtttgatcagcaactactcacaagctccagactctttattgaatccagag
ataaacaacccattgatggcagagcagctggaaacctttgatgagttacgtgctgaactt
gatcagtctgatataaagcagagggagatgcaagagaagatccagcagatggaactggag
aaggaacagttacaaaggacaataactttgaatgagcaaactgcagaagctatgaagaaa
tcaactgctcataccatggaagaaaatcataaactgaagcagatgttggaagagttgaat
cagaattttgcaggttctgcttttgctcaagaaattgttaaggaatttcaaaaatcattg
cagatattagaagacggttccattgaaaaacagaaggagcttcagaggaaggttttggag
ctagaagactgcacagcaaagtttcagtcattaacacaagaactggagaggatcaggatt
tctgaagagaccaaaactggcattgttaatgagcttcagaccaagctaattgcagcagaa
caaaagaatgcagagctgctcgcaagaatagatagtattttgactgaaaaggggcaacta
acagcaacccactatgattcagcacagaagatccaggagcttcttgacaagctgaatgag
gctgagtgggaggaaattggcttgcagagattaagcagtatacagcagtctcagctgaac
aagttaaaaaatgatttggaatcaaaagagtccttaataaatgagcttgagttgaagcta
caagaggcagcttcaaatcttcaggagaaaaatgctatacttgcaaacaaagatgaagag
atagaaagtaccctgaataagttgaaagaaattaaaaatgtacaagaaatggacactacg
gatcttgaatcagggcagaagtctgttcaggaattgagaaaagagcaagaagaaatgcaa
atcaaatataaagaattaaagatcactttagaggaacaagcaaacactctttccaacaat
ctgaaagccaaagaatcggaattaactgctgctcataaccaggtacaaaatcttctggag
attcagaatacgcttttaggtgagaaagaagatcttacaaaaaaaacacaagatttagaa
gaaatgctcgccaaactgaagactaggacagaagatcttaatgttgaatatcagaaattg
caagttgagagggagaaacatcaccaggttgtgcagaaacatgttgaaagagaggaagag
ttggagaaggtgtgtttaactcttgaaactgagatagacaaattgaatgcatcagagatg
caattgcagggccaaatagcggatgctatggtgacagtggatgaaaaggaaacaaggtta
agggaagaaaacaggcagttaaatgagaaactgcaatgtgctctcaggcaggttaagaga
gcagaagcaaagctggaaaagaatcaggtggaatttgatgatttgaaagcagaaaaaaat
aagttgaacgactgcttgctaaacctccaaggatgttgccaggctaagggagaactgatt
tcagacctgcagaataaattggttgaatcaaagcagaatgaacatgcacttgtttccctt
ctagataagaaggaaggtgctttgcttgaaaaggttagcgcattaaaggagttttccgaa
aagattgagaaaagtcaggtagctatagaggctttggagagagaaaagttgaatcttgag
agtaactttaagcagcagatggcactttcagaaagcctagtacttgagcaaaatgcagta
gtggaagctcagctacaggcgagagagcttcaggagaaagaaatgcaggagataaatgca
aaattaatttcaattaaaaatcagcttgaaatccagctggcagaagtgaccaggttcaag
gcagagagtgaagagctcaagtcaaagcttaaacaggcactcgaggaaaaggaaagtata
tgcagtaatctaaaactttcagtatcttccaaggaagaatacagagctttggttcaaaat
ctaaaagagcagatacaatcaatcaatcatgatcatgctgagaaactcttgctgattaaa
gaaaaagaagattgccttaaaaatgaaagggagaagtcagtgcaacaggtaattgaactt
gaggaacaacttctgactgctaaggaagagttgtcccagttgaaacaatatattgaaaag
attgatcttgaaaatgtggagaccaaagatctactccacaggatgaacactgaaattgcg
gaacttggtatgcagatttgtacactcagtgcagaaaaagctgacgctgagaagaaatat
attgaagtttctcaacagcaaatagcattctgcgaggaggtcaaagcagaacaaaaccaa
ctgaatcttgatgtttccaaactcaagagtgagaaggaacagctgctggaagagttaagg
cgatcgaaagagtccgaaacaactatcaaagagctgcagagaaatctagcacaagcccaa
cagcaagcaaagggctgccaagaagctgcaagagaagaattgtctgcagtcaaatttcag
atgagtggagagatgatggattatcagaataaactaaagactgttaatgaagagttggag
gctgtgaaaaaggatcttaatgggcgacaaacccaaataatgtcaattaataaacaactc
gtcgaagttcaggattgtaatcgcaaattaatggatgaagtggaacaaaaagaacaaaca
attgtggattcacaattattgagaaatgaaaaagaggagaagctaagatccctttctgaa
aatttaatcagtactcagcaggaattggaaaatgtaaagaaggagctcgaagattacaaa
acacaccttcagaagacgcaagaagagactgagagaaatgaacaaaaacttgtggctgaa
ttagctgacttgaacaggactaaagagtttttggaagagcgcttaatcgaactcattaaa
gacaaggatgccctgtggcaaaaaacagatgcattggaatttgaacaaaagctccgtgca
gaaacccgatggcttggtgacaaggaggttaaccactgtctggattgccaaagtcagttt
acatggtggttacgtcggcatcattgcagactctgtggacgtatcttctgctactactgc
agcaataattttgtaatgacaaagcacagcggtaaaagagagagatgctgcagagcctgc
tacacagaacataatgctgtggttcaaagactgaatgatcctggatcttccagtactcca
aacagccctgatgaatctccctcacgttcagcttcagaaggaccaactagcagaaacaca
gaaagtttcaccaaaccagacgatgcaacttttgacataattacagatgaagagctgaac
gaaattgatgataatgattattctttggaattggggaaccagcttctagctacccagtcg
gaatcaacaatgccaatcgttcattctctaagtcccacgtgtgataatgcatcagaacca
agtattccacccgaggatggatcagcacaacctatgcaggatgcagagattactttgttg
aaatgtggagaaattacactcaagatacccctcaagttagatgagattaaggaatttgga
gaccacagtagagagctttttgttaaggccagctgctacagtctcatccctattggtgtt
gaagagtgtggtctgaccatcagctggatcttttcttctgatccaaagagcatctcattc
agtgttgtttatcaagaatctgaacaaactccatatgaacaatgcaaggttttaattcct
ctaactcgttgcaattcccacaaggaaacaatacaaggacaattgaaggttaggaatccg
gggctgtatttgctgatttttgataattctttttccaggtttacctcaaagaaggtgctt
tatcacttaactgttgagaaaccaatagtctacgatggaagtgatgcttctgaaccctga
DBGET
integrated database retrieval system
