Chiloscyllium plagiosum (whitespotted bambooshark): 122564593
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Entry
122564593 CDS
T08871
Name
(RefSeq) TNF receptor-associated factor 2-like
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04010
MAPK signaling pathway
cpla04137
Mitophagy - animal
cpla04141
Protein processing in endoplasmic reticulum
cpla04210
Apoptosis
cpla04217
Necroptosis
cpla04621
NOD-like receptor signaling pathway
cpla04622
RIG-I-like receptor signaling pathway
cpla04920
Adipocytokine signaling pathway
cpla05132
Salmonella infection
cpla05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122564593
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122564593
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
122564593
09143 Cell growth and death
04210 Apoptosis
122564593
04217 Necroptosis
122564593
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
122564593
04622 RIG-I-like receptor signaling pathway
122564593
09152 Endocrine system
04920 Adipocytokine signaling pathway
122564593
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122564593
09171 Infectious disease: bacterial
05132 Salmonella infection
122564593
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122564593
04121 Ubiquitin system [BR:
cpla04121
]
122564593
Enzymes [BR:
cpla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122564593
Messenger RNA biogenesis [BR:
cpla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
122564593
Ubiquitin system [BR:
cpla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
122564593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
Sina_ZnF
Cep57_CLD
CEP104_ZnF
Motif
Other DBs
NCBI-GeneID:
122564593
NCBI-ProteinID:
XP_043575616
LinkDB
All DBs
Position
30:2216042..2259176
Genome browser
AA seq
501 aa
AA seq
DB search
IGIVDFCVFFSSTGSQKCAACIQEDIYEEPLSVLDASSAFPDNAARREVENLPAVCNNES
CTWKGTVKEYEADHEGRCEYTLTPCEACSRMVRQLDMSRHLERECPERNLNCKFCKLLFH
HKDIKAHDEICSKFPLTCEWCGKKKIPREKYLDHTRTCGKVKFPCRFSVIGCEITAEKEK
LAEHENQCVVDHMQMLLQHVMGIRSAVESLQPLHLQQAKLKVNQLFTSVREMEETLGPFR
SIALGERGSSSPGGDLAKAYLSESLEDVQTRCAALKHKAETFENIVCVLNREVERASVSM
VAYEQQHKLDQEKIEALQAKVRQMEHATALKDLSIAQLELKLQALEYSTDNGIFIWKISD
FSRRRQEAKTQRSPAIFSPAFYTSKYGYKMCLRVYLNGDGVGRGTHMSLFFVIMKGNYDS
LLRWPFKQKVTLLLLDQTNREHIIDAFRPDISSSSFQRPVTEMNIASGCPLFCPLSKLDS
KNNYSREDCIFIKAIVDLTDL
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
attgggattgttgatttctgtgttttcttttccagtactggctcacaaaaatgtgcagct
tgcatccaagaagacatttatgaagaaccgttgtctgttctggatgccagctcagctttc
cccgacaatgcagctcgcagagaagtggaaaacctgcctgcagtttgtaacaatgagagt
tgtacctggaaaggcactgttaaggagtatgaggctgaccacgagggaagatgtgagtac
acattaacgccttgtgaagcgtgcagcaggatggtacgccaactcgacatgtcccgccac
ctggagcgagagtgccccgaaaggaacctcaactgcaaattctgtaaattattgtttcac
cacaaggatattaaggcccatgatgaaatctgttccaagtttccgttaacatgcgaatgg
tgcggaaagaaaaagattccaagagaaaagtacttggatcatactcggacatgtgggaag
gtgaagttcccttgccgctttagcgtgattggctgtgaaataactgctgagaaggaaaag
ctggctgagcatgagaaccagtgtgtggtggaccacatgcagatgctgctccaacatgtg
atgggaatacggagtgctgtggaaagcctacagcctctgcacctgcagcaggccaagctc
aaggtcaaccagctctttacctccgttcgtgaaatggaggagactctgggaccattccga
tcgatcgctcttggtgagagaggctcctcctctcctggtggggacctggcaaaagcttac
ttgtcagaaagcttagaagatgtgcaaacgcgatgtgcagctctgaagcacaaagctgaa
acattcgaaaacattgtctgtgttcttaaccgtgaggtggagcgagcctctgtgagcatg
gtagcttacgaacaacaacacaaactggaccaggagaagattgaagccttacaagcaaag
gtgcgtcagatggaacacgctacagccttgaaagacctgtctatagcacagttggaactg
aagctgcaggcactggagtacagcactgacaatggaatctttatctggaaaatatccgat
ttcagtcgaagacgacaggaagctaaaacccaacgatcgcctgctatattctccccagct
ttctacaccagtaaatacggctacaagatgtgcctgcgtgtctatctgaatggtgatggg
gtgggccgtggaacccacatgtctcttttctttgttattatgaaaggaaactacgatagt
ttgctgaggtggcctttcaagcaaaaggtgactctgttgctgttggaccagactaaccgt
gagcacatcatcgatgcgttcagaccggatatcagttcctcctcattccagagaccggtc
accgagatgaacattgccagtgggtgcccacttttctgtccacttagtaaactggacagc
aagaacaattactcacgtgaagactgtatttttatcaaagccatcgtggatttaactgac
ctgtaa
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