Chlamydia pneumoniae CWL029: CPn_0149
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Entry
CPn_0149 CDS
T00021
Symbol
dnlJ
Name
(GenBank) DNA Ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
cpn
Chlamydia pneumoniae CWL029
Pathway
cpn03030
DNA replication
cpn03410
Base excision repair
cpn03420
Nucleotide excision repair
cpn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CPn_0149 (dnlJ)
03410 Base excision repair
CPn_0149 (dnlJ)
03420 Nucleotide excision repair
CPn_0149 (dnlJ)
03430 Mismatch repair
CPn_0149 (dnlJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpn03032
]
CPn_0149 (dnlJ)
03400 DNA repair and recombination proteins [BR:
cpn03400
]
CPn_0149 (dnlJ)
Enzymes [BR:
cpn01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
CPn_0149 (dnlJ)
DNA replication proteins [BR:
cpn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CPn_0149 (dnlJ)
DNA repair and recombination proteins [BR:
cpn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
CPn_0149 (dnlJ)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CPn_0149 (dnlJ)
MMR (mismatch excision repair)
DNA ligase
CPn_0149 (dnlJ)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CPn_0149 (dnlJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
HHH_5
BRCT
HHH
DNA_ligase_ZBD
HHH_3
PTCB-BRCT
RNA_pol_A_CTD
HHH_8
DUF2157
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
AAD18302
UniProt:
Q9Z934
LinkDB
All DBs
Position
185715..187703
Genome browser
AA seq
662 aa
AA seq
DB search
MKEENSQAHYLALCRELEDHDYSYYVLHRPRISDYEYDMKLRKLLEIERSHPEWKVLWSP
STRLGDRPSGTFSVVSHKEPMLSIANSYSKEELSEFFSRVEKSLGTSPRYTVELKIDGIA
VAIRYEDRVLVQALSRGNGKQGEDITSNIRTIRSLPLRLPEDAPEFIEVRGEVFFSYSTF
QIINEKQQQLEKTIFANPRNAAGGTLKLLSPQEVAKRKLEISIYNLIAPGDNDSHYENLQ
RCLEWGFPVSGKPRLCSTPEEVISVLKTIETERASLPMEIDGAVIKVDSLASQRVLGATG
KHYRWALAYKYAPEEAETLLEDILVQVGRTGVLTPVAKLTPVLLSGSLVSRASLYNEDEI
HRKDIRIGDTVCVAKGGEVIPKVVRVCREKRPEGSEVWNMPEFCPVCHSHVVREEDRVSV
RCVNPECVAGAIEKIRFFVGRGALNIDHLGVKVITKLFELGLVHTCADLFQLTTEDLMQI
PGIRERSARNILESIEQAKHVDLDRFLVALGIPLIGIGVATVLAGHFETLDRVISATFEE
LLSLEGIGEKVAHAIAEYFSDSTHLNEIKKMQDLGVCISPYHKSGSTCFGKAFVITGTLE
GMSRLDAETAIRNCGGKVGSSVSKQTDYVVMGNNPGSKLEKARKLGVSILDQEAFTNLIH
LE
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaagagaattcacaagcacactacttagctttatgtcgtgaattagaagaccat
gattattcttattatgtgttgcatcgtcctagaatctctgattatgaatatgacatgaaa
ttacggaagcttcttgaaatagagagaagtcatcccgaatggaaagtcttatggtctccc
tcaacacgtctcggagatcgtccctctggaactttttctgtggtttcccataaggaaccg
atgctttccattgccaatagctattctaaagaagaactaagtgagtttttttctagggta
gaaaaatccctaggtacaagtccacgttatacagtagaacttaaaatcgatgggattgca
gtagcaatacgttatgaagatcgtgtgttggttcaagcactcagccgaggaaatggaaag
cagggagaggatatcacatcgaatattcgaacaatacgctccttgcctttaagacttcca
gaagatgctccagagtttattgaagtacgtggcgaggtcttcttctcttattctacgttt
caaattatcaatgagaagcagcaacaattagagaaaactatttttgccaacccgagaaat
gctgcaggaggtaccttaaagttactttctcctcaagaagtcgcaaaacgtaaattagaa
atttctatctataatctcattgctccaggagataacgattctcattatgaaaatcttcag
cgctgccttgaatggggatttcctgtatctggtaaaccaagattgtgctctaccccagag
gaagtgatctcagttttaaagactatagaaactgagagagcttccttgcctatggaaatc
gatggtgctgtcatcaaggtagacagtttggcaagtcagagagttcttggagccacaggg
aaacactatagatgggccttagcttataaatatgccccagaggaagcagagacccttctt
gaggatattctagttcaagtaggaagaacgggagttctgactcctgtagctaaactcact
cctgtactgttgtcagggtctttagtatctagagcgtctctatacaatgaagatgagatt
catagaaaagacatccgtattggtgataccgtttgtgttgctaaaggtggagaggtgatt
ccaaaagtagttcgggtatgcagagaaaaacgtcctgaaggttctgaagtttggaatatg
cctgaattctgccctgtctgccatagtcacgtagttcgggaagaagatagagtttctgtg
cgttgtgtcaatcctgagtgtgttgcaggagctattgaaaaaattcgtttttttgttggt
cggggagctttaaatatcgatcatttaggggtgaaggtaatcacaaagctgtttgaatta
gggttagtgcacacgtgtgcggacctatttcagctgactactgaagatttaatgcaaatt
cccgggatacgggaacgctctgcaagaaatattctagagagtatcgagcaagctaaacat
gtggatctagatcgttttcttgttgctctggggattcctctcattggaattggtgttgct
actgtactagctggccacttcgagactttagatcgggtaatttccgcgacttttgaagaa
cttctttcactagagggtattggagagaaggtggctcatgctattgctgagtatttttca
gactctacgcatcttaacgaaatcaagaaaatgcaggatttaggagtgtgtatatctcct
tatcataaatcaggatctacgtgttttggcaaggcttttgtgatcacagggacgttagag
ggaatgtctcggttagatgcagaaactgctatccggaattgtgggggtaaggtaggctcc
tctgtctcgaaacagaccgattacgtagttatggggaataacccaggatctaaattagag
aaggctaggaaattgggagtctctatcttagatcaagaagcctttacaaatctaattcat
ttagaataa
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