Cavia porcellus (domestic guinea pig): 100717730
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Entry
100717730 CDS
T07777
Symbol
Scn4a
Name
(RefSeq) LOW QUALITY PROTEIN: sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpoc04040
]
100717730 (Scn4a)
Ion channels [BR:
cpoc04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
100717730 (Scn4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
100717730
NCBI-ProteinID:
XP_003465977
Ensembl:
ENSCPOG00000008540
LinkDB
All DBs
Position
Unknown
AA seq
1830 aa
AA seq
DB search
MASSAVPNLPLGPPCLRPFTRESLAAIEQRAVEEEARLQRNKQMEIEEPERKPRSDLEAG
KNLPLIYGDPPPEVIGIPLEDIDPYYSDKKTFIVLNKGKAIFRFSATPALYMLSPFSVVR
RGAIKVLIHSLFSMFIMITILTNCVFMTMSDPPPWSKNVEYTFTGIYTFESLIKMLARGF
CIDDFTFLRDPWNWLDFSVILMAYVTEFVDLGNISALRTFRVLRALKTITVIPGLKTIVG
ALIQSVKKLSDVMILTVFCLSVFALVGLQLFMGNLRQKCVRWPPPFNDTNATWSGNDTWY
GTDTWYSNYTWGSHESWASNYTFDWDAYINDEGNYYFLEGANDALLCGNSSDAGHCPEGY
ECMKAGRNPNYGYTSYDTFSWAFLALFRLMTQDYWENLFQLTLRAAGKTYMIFFVVIIFL
GSFYLINLILAVVAMAYAEQNEATLAEDQEKEEEFQQMLEKFKKQQEEQEKAKAAQALEG
VGADGDLAHGKDCNGSLDTSGEKGPPRPSCSAESAISDAMEELEEAHQKCPPWWYKCAHT
VLIWNCCVPWVKFKHIIYLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEQFDNVLSVGN
LVFTGIFTAEMVLKLIALDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLL
RVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKIA
SDCNLPRWHMHDFFHSFLIVFRILCGEWIETMWDCMEVAGQAMCLTVFLMVMVIGNLVVL
NLFLALLLSSFSADSLAASDEDGEMNNLQIAIGRIRWGIGFAKAFLWGLLHGKILSPNEI
MLSLGEPGGTGEAGEAGESAPEDEKKEPPPEEEDKDLKKDNHILNHVGLANGSPSTIELD
HLNFINNPYLTIQVPIASEESDLEMPTEEETDTFSEPEDGKKPLQPLYDGNSSVCSTADY
KPPEEDPEEQAEENPEGEQPEECFTEACVQRFPCLYVDISQGRGKMWWTLRRACFKIVEH
NWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYIFIMEMLLKWVAYGFK
VYFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVV
NALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCMNTTTSERFDISEVNNKSECE
SLMHTGQVRWLNVKVNYDNVGLGYLSLLQVATFKGWMDIMYAAVDSREQEEQPQYEVNLY
MYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGKDIFMTEEQKKYYNAMKKLGSKK
PQKPIPRPQNKIQGXVYDFVTKQVFDITIMILICLNMVTMMVETDDQSQLKVDILYNINM
IFIVIFTGECVLKMFALRQYYFTIGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVI
RLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFAYVKKE
SGIDDMFNFETFGNSIICLFEITTSAGWDGLLNPILNSGPPDCDPTLENPGTSVKGDCGN
PSIGICFFCSYIIISFLIVVNMYIAIILENFNVATEESSEPLGEDDFEMFYETWEKFDPD
ATQFIDYSRLSDFVDTLQEPLRIAKPNKIKLITLDLPMVPGDKIHCLDILFALTKEVLGD
SGEMDALKQTMEEKFMAANPSKVSYEPITTTLKRKHEEVCAIKIQRAYRRHLLQRSLKQA
SYMYRHSQDGNGDGDGGAPEKEGLIANAMSQMYGPENGKTSVQSQGQEEGSTGDTGLAMG
LVPINPSDTTLPPSPPPGQTVRPGVKESLV
NT seq
5493 nt
NT seq
+upstream
nt +downstream
nt
atggccagctcagctgtgcccaacctacccctgggccccccatgcctgcgtcccttcacc
cgggagtccctagcagccatagagcagcgggcagtggaggaggaggcccggctgcagcgg
aataagcagatggagattgaagagcccgaacggaagccacgcagtgacctggaagctggc
aagaacctgccacttatctatggggaccccccaccagaagtcattggcattcctctcgag
gacatagatccctactacagtgacaagaagaccttcatcgtgctcaacaagggcaaggcc
atcttccgcttctctgccacacctgccctctacatgctgagtccattcagcgtggtcagg
cggggtgccatcaaggtgctcatccattcgctgttcagcatgttcatcatgatcaccatc
ttgaccaactgtgtgttcatgaccatgagtgacccacctccctggtccaagaatgtggag
tacaccttcacagggatctatacctttgagtccctcatcaagatgctggcccgaggcttc
tgcatcgatgacttcacattcctccgagacccttggaactggctggacttcagtgtcatt
ctgatggcgtacgtgacagaatttgtggacttgggcaacatctcagccctgaggactttc
cgggtgcttcgagccctgaaaaccatcacagtcatcccagggctgaagacaatcgtgggg
gcactgatccagtcggtgaagaagctgtcggacgtgatgatcctcaccgttttctgcctg
agtgtctttgccctggtggggctgcagctcttcatgggaaacctgaggcagaagtgcgtc
cgctggccccctcccttcaatgataccaatgctacgtggtctggcaacgacacgtggtac
ggcactgacacgtggtacagcaactacacgtggggcagccacgagagctgggccagcaat
tacaccttcgactgggatgcgtacatcaacgatgaagggaactactatttcctggagggt
gccaacgatgctctgctctgtgggaacagcagtgatgctgggcactgtcctgagggttat
gagtgcatgaaggccgggcgcaaccccaactatggctacaccagctacgacaccttcagc
tgggcctttctggctctcttccgcctcatgacacaggattactgggagaacctcttccag
ctgactcttcgagcagcaggcaagacctacatgatcttctttgtggtcatcatcttcctg
ggctccttctatctcatcaatctgatcctggcagtggtggccatggcatatgctgagcag
aatgaggccaccttagccgaagatcaggagaaagaggaggagtttcagcagatgcttgag
aaattcaaaaagcagcaggaggagcaggagaaagccaaggctgcccaggctctggaaggt
gtgggggcagatggagacctggctcatggcaaagactgcaatggcagcctggacacgtct
ggggagaagggacccccaaggccgagctgtagcgcagaaagtgccatctcggatgctatg
gaggagctggaagaggcccaccagaagtgcccaccatggtggtacaaatgtgcgcacaca
gtgctcatatggaactgctgtgtgccatgggtgaagttcaaacacatcatctacctgatc
gtcatggaccccttcgtggacctgggcatcaccatctgcatcgtgctcaacaccctcttc
atggccatggagcattatcctatgactgagcagtttgacaatgtgctctccgtgggcaat
ctggtcttcacgggcatcttcacagctgagatggtgctgaagctaatcgccttggacccc
tacgagtatttccagcagggctggaacatcttcgacagcatcattgtcaccctcagcctg
gtggagctgggcctggccaacgtgcaggggctgtctgtgctccgctccttccgtctgctc
cgggtcttcaaactggctaagtcatggccaacgctcaacatgctcatcaagatcatcggt
aactcagtgggggccctgggcaacctcacgctggtgctggccatcatcgtgttcatcttc
gccgtggtgggcatgcagctgtttggcaagagctacaaggagtgcgtgtgtaagatcgcc
tcggactgcaacctgccacgctggcacatgcacgatttcttccactccttcctcatcgtc
ttccgcatcctgtgtggggagtggatcgagaccatgtgggactgcatggaggtggccggc
caggccatgtgcctcaccgtcttcctcatggtcatggtcatcggtaacctggtggtcctg
aacctgtttctggccctcctgctaagctccttcagtgccgacagcctggcagcctcagac
gaggatggtgagatgaacaacctgcagatcgctatcgggcgcatcagatggggcatcggc
tttgctaaggccttcctctgggggctgctgcacggcaaaatcctgagccccaacgagata
atgctcagcctcggagagccggggggtactggagaggctggagaggcgggggagagtgcc
cctgaggatgagaagaaggagccaccccctgaggaagaggacaaggacctgaagaaggac
aatcacatcctgaaccatgtgggcctggccaatggctctccctccaccatcgagctagac
cacctcaatttcatcaacaacccctacctgaccattcaggtgcccattgcctctgaggag
tccgacctagagatgccaaccgaggaggaaaccgacacattttcggaacctgaggatggc
aagaaaccgctgcagcccctctacgatgggaactcctccgtctgcagtactgctgattac
aaaccccccgaggaggaccccgaggagcaggctgaggagaaccctgagggggagcagcct
gaggagtgcttcaccgaagcctgtgtgcagcgcttcccctgcctctacgtggacatctct
cagggccgcgggaagatgtggtggacactgcgcagggcctgcttcaagattgttgaacac
aactggtttgagaccttcattgtcttcatgatcttgctcagcagtggggccctggccttt
gaagacatctacatcgagcagcgacgagtcatccgcaccatcctagaatacgctgataag
gtcttcacctacattttcattatggagatgctgctcaaatgggtggcatacggcttcaag
gtgtacttcaccaacgcctggtgctggctcgatttcctcattgtggatgtctccatcatc
agcctggtagccaactggctgggctactctgagctgggacccatcaaatccctgagaacg
cttcgagccctgcgacccttgagggcactgtctcgattcgagggcatgagggtggtggtg
aacgccctcctgggagccatcccttccatcatgaacgtgctgcttgtctgcctcatcttc
tggctcatcttcagtatcatgggcgtcaacttgttcgctgggaagttctactactgcatg
aacaccaccacctcggagaggttcgacatctcagaggtcaacaacaagtccgagtgtgag
agcctcatgcacacgggccaggtgcgctggctcaacgtcaaggtcaactatgacaacgtg
ggcctcggctacctctccctcctccaggtggccaccttcaagggttggatggatatcatg
tacgccgccgtggactcccgggagcaggaggagcagccacagtatgaagtgaacctctac
atgtacctctactttgtcatcttcatcatctttgggtccttcttcacactcaacctcttc
atcggtgtcatcatcgacaacttcaaccagcagaagaagaagtttggaggaaaagacatc
ttcatgacagaggaacagaagaaatactacaatgctatgaagaagcttggctccaagaag
cctcagaagccgattccacggccccagaacaagatccaaggcnttgtgtacgacttcgtg
acaaaacaggtatttgacatcaccatcatgatcctcatttgcctcaacatggtcaccatg
atggtggagacggatgaccagagccagctcaaggtggacatcctgtacaacatcaacatg
atcttcattgtcatcttcaccggggagtgtgtgctcaagatgttcgccttgcgccagtac
tatttcaccatcggctggaacatcttcgactttgtggtcgtcatcctgtccattgtgggt
cttgcactctccgacctgatccagaaatactttgtgtcgcccaccctgttccgtgtgatc
cgcttggctcgcattgggcgtgtcctgcggctaatccgtggggccaagggcatccgaacg
ctgctgtttgccctcatgatgtcactgcctgccctattcaacatcggcctcctcctcttc
ctggtcatgtttatctattccatcttcggcatgtccaactttgcctacgtcaagaaagaa
tcgggcatcgacgacatgttcaactttgagacatttggcaacagcatcatctgcctcttt
gaaatcaccacatcagctggctgggatgggcttctgaaccccatcctcaacagtgggccc
ccagattgtgaccccacactagagaaccccggcaccagtgtcaagggtgactgcggcaac
ccatccattgggatctgcttcttctgcagctacatcatcatctccttcctcattgtggtc
aacatgtacatcgccattatcctggagaacttcaacgtggcaaccgaggagagcagtgag
ccccttggtgaagatgacttcgagatgttctatgaaacatgggagaaattcgaccctgac
gccacgcagttcattgactacagccgcctgtctgacttcgtggacaccctgcaggaaccc
ctgagaattgccaagcctaacaaaatcaagctcatcactctggacctacccatggtgcca
ggagacaagatccactgtctggacatcctctttgccctgactaaagaggtgctgggtgac
tctggggaaatggatgccctcaagcagaccatggaggagaagttcatggctgccaatccc
tctaaggtctcctacgagcccatcaccaccaccctgaagaggaaacatgaggaggtgtgt
gccatcaagatccagagagcctaccgccggcatctgctgcagcgctctctgaagcaggca
tcctacatgtaccgccacagccaggacggcaacggggacggggatgggggggcccctgag
aaggaggggctgatcgccaatgccatgagccagatgtatggcccagagaatgggaagacc
agtgtacagagccaagggcaggaggagggttccacgggggacactggactcgccatgggg
ctcgtgcccatcaacccctcagatactacgctgcctccctccccgccaccagggcagaca
gtgcgcccaggggtcaaagagtctcttgtctag
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integrated database retrieval system
