KEGG   Cavia porcellus (domestic guinea pig): 100719171
Entry
100719171         CDS       T07777                                 
Symbol
Lig4
Name
(RefSeq) DNA ligase 4
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
cpoc  Cavia porcellus (domestic guinea pig)
Pathway
cpoc03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:cpoc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    100719171 (Lig4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cpoc03400]
    100719171 (Lig4)
Enzymes [BR:cpoc01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     100719171 (Lig4)
DNA repair and recombination proteins [BR:cpoc03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     100719171 (Lig4)
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N BRCT DNA_ligase_IV DNA_ligase_A_C BRCT_2 RNA_ligase mRNA_cap_enzyme LIG3_BRCT ATG17_like
Other DBs
NCBI-GeneID: 100719171
NCBI-ProteinID: XP_003477632
Ensembl: ENSCPOG00000014266
UniProt: H0VQM4
LinkDB
Position
Unknown
AA seq 911 aa
MAASQTSQTVASHVPFADLCSTLERIQKSKGRAEKIRHFKEFLDSWRKFHDALHKNQKDV
KDSFYPAMRLILPQLERERMAYGIKETMLAKFYIELLNLPREGKDALKLLNYRTPTGTRG
DAGDFAMIAYFVLKPRCLQKGSLNIQQVNELLDSIASNNSAKKKDLVKKSLLQLITQSSA
LEQKWLIRMIVKDLKLGFSEKTILSVFHNDAAELHNVTTDLEKVCRQLHDPSVGLSDISI
TLFSAFKPMLAAIANIEHIEKDMKQQSFYIETKLDGERMQMHKDGDVYRYFSRNGYNYTD
QFGASPNEGSLTPFIHKAFKTDVQTCILDGEMMAYNPNTQTFMQKGNKFDIKRMVEESDL
QTCYCVFDVLMVNNKKLGRETLKKRHEILNNTFTPIPGRMEIVQKAQARTKKEVIDALNE
AIDKREEGIMVKHPLSIYKPDKRGEGWLKIKPEYVNGLMDELDILIVGGYWGKGSRGGMM
SHFLCAVAEKPPSGEKPTVFHTLCRVGSGYTMKELYDLGLKLAKYWKPFHKKAPPSSILC
GTEKPEVYIEPCHSVIVQIKAAEIVPSEMYKTCCTLRFPRIEKIRDDKEWHECMTLDQLE
QLGGKASGKLASKHLDLDSTDEPKEKKRKTAPKVKKVIGILEHLKAPNLSNVSKVSNIFE
DVEFCVMSGTVSHSKLDLENRIAEFGGYIVQNPGPDTYCVIAGSENIRVKNIISSDKHDV
VRPEWLLECFKAKTCLPWHPRFMIHMCPSTKQYFAREYDCYGDSYFVNTDLTQLKEVFSG
IKNPHAQSPEEMASVIAELECRYSWDRSPLSMFRHHTIYLDLYTVVNDLSTSIKGARLAV
TALELRFHGAKVVSCLAEGVSHVIIGEDQSRVADFKAFRRTLKKKFKILQVAWVTDSIDK
GELEEESRYLI
NT seq 2736 nt   +upstreamnt  +downstreamnt
atggctgcctcacaaacttcacagactgttgcatctcatgttccctttgcagatttatgt
tcaactttagaacgaatacagaaaagtaaaggacgtgcagaaaaaattagacacttcaag
gaatttttagattcttggagaaaatttcatgatgctcttcataagaaccaaaaagatgtt
aaagactctttttatccagcaatgagacttattcttcctcagctagaaagagagagaatg
gcttatggaatcaaagaaactatgcttgctaagttttacattgaattgctcaatttacca
cgagaaggaaaagatgctcttaaactcctaaattacagaacacctactggaactcgtgga
gatgctggagactttgcaatgattgcatactttgtgttgaagccaagatgtttgcagaaa
ggaagtttaaacatccagcaagtcaatgaacttttagactcaattgccagcaataattct
gccaaaaaaaaggacctagtgaaaaagagtcttcttcaacttataactcagagttcagca
cttgaacaaaagtggcttatacggatgattgtaaaggacttaaagcttggtttcagtgag
aaaactatattatctgtttttcataacgatgctgctgagttgcataatgtcaccacggat
ctagaaaaagtctgcaggcaactccatgacccctctgttggactcagtgatatttcgatc
acattgttttctgcctttaaaccaatgctggctgccatagcaaatattgagcacattgag
aaggacatgaaacagcagagtttctacatcgaaaccaagctcgatggtgaacgcatgcag
atgcacaaagatggagatgtgtatcggtacttctctcgaaacgggtacaactacactgat
cagtttggtgcttctcccaatgaaggttctcttacccccttcattcataaggcgttcaaa
acagatgtgcagacctgtatcctggatggagagatgatggcctacaaccccaacacccaa
acttttatgcaaaaggggaataagtttgacattaaaagaatggtggaagagtctgatctg
cagacttgttactgtgtttttgatgtgttgatggttaataataaaaagctaggacgcgag
accctgaaaaagaggcatgagattcttaataatacctttaccccaataccaggtaggatg
gaaatagtacagaaagcacaagctcgtactaagaaagaagtcattgatgcactgaatgaa
gcaattgataaaagagaagagggaatcatggtcaaacatcctctgtccatttataagcca
gacaaaagaggcgaagggtggctaaaaattaaaccagagtatgtcaacggattaatggat
gagttggacatcttaattgtgggaggctattggggaaagggctcccgcggtggcatgatg
tctcattttctgtgtgccgtagcagagaagcccccttctggtgagaaaccaactgtgttt
catacgctctgtcgtgtcggctcagggtacaccatgaaagaattgtatgatctaggtcta
aaactggccaaatactggaaaccttttcataaaaaagcacccccaagtagcattctgtgt
ggaacagagaaaccagaagtgtacattgaaccttgtcattctgtcattgttcagattaag
gcagcagagattgtccccagtgaaatgtataagacttgctgtaccttgcgttttccgaga
attgagaagataagggatgacaaagagtggcacgagtgcatgactctggatcagctagag
cagctgggggggaaggcctccgggaagcttgcctccaagcacctggacctggacagtacc
gatgagccaaaagagaaaaagcggaaaaccgccccaaaggtgaagaaagtcattgggatt
cttgaacacttgaaagcacctaacctctctaacgtaagcaaagtttctaatatatttgag
gatgtagagttctgtgttatgagtggaacagtcagtcattcaaaacttgacctggagaac
agaattgcagaatttggtggttacatagtacaaaaccctggtcccgacacgtactgtgtc
attgcaggctcagagaatatcagagtgaaaaacattatttcatctgataaacacgatgtt
gtccggcccgagtggcttttagaatgttttaaagccaagacctgcttgccatggcaccct
cgctttatgattcacatgtgtccatcaacaaaacagtattttgcccgtgaatatgattgc
tatggtgacagttattttgtgaacacagatttgacccaactgaaagaagtgttctcaggg
attaaaaatcctcatgcccagagccctgaagaaatggcctctgtgattgcagagttagag
tgtcgttattcctgggaccgctctcctctcagtatgtttcgacaccacaccatttatctg
gacctgtacactgttgttaatgacttgagtacgagcatcaagggagcaaggttagctgtt
acagctttggagcttcgctttcatggagccaaagtggtctcttgtttagctgaaggggtg
tctcacgtgatcattggggaagatcagagtcgggtggcagattttaaagcttttcgaaga
actctgaagaaaaagtttaaaattctccaagtagcttgggtaactgattcaatagacaaa
ggtgagttagaggaggaaagtcggtatttgatttaa

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