Cavia porcellus (domestic guinea pig): 100720545
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Entry
100720545 CDS
T07777
Symbol
Hps6
Name
(RefSeq) LOW QUALITY PROTEIN: Hermansky-Pudlak syndrome 6 protein
KO
K20192
Hermansky-Pudlak syndrome 6 protein
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpoc04131
]
100720545 (Hps6)
Membrane trafficking [BR:
cpoc04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
100720545 (Hps6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HPS6_C
HPS6
Motif
Other DBs
NCBI-GeneID:
100720545
NCBI-ProteinID:
XP_005008598
LinkDB
All DBs
Position
Unknown
AA seq
795 aa
AA seq
DB search
MKRGASLRLLSDLSDFSCAAQFRELLARDAAIRLRCSADGRHLLLLSGPGAPAPQLLVAA
RGSGAGLERAWPEARAAPLDAIFLSWPARPALALVWESGLVELWGTDLGPAWRRLHTTEL
CPHGXARVAPAAAPRGRLVWCEERPDGAGGHRVCVRTLEPGGETGVRLGRTHVLLHHCPP
FRLLASRKDVFLGPTASAWPGAAHILLTWNPSKGKVMVTAPRLGLSYSKSLNPKQGDTWD
FRTLLRGFPGLLYPGEPLAVHTWAPTPQGLLLLDSRGTIILVQAHGGTRTVGALQEASIG
LESTAALGAFNGTLACVLGSTLELLDMSTGRLLERKVLSTDRVHLLEPPALAMKDGEELE
TRRGLRLLSALGLFHVGWEAPQSFELPSATDLVFEEACGYYQRRSLRGAQLTPEELRHNS
MFQAPQALASILQGHLSPSALLTILRVELRDYQGLEQLKAQLVAGEEEEAVWTELAHQEV
ARLLRTELTGEQLAQLNTVFQALPSAAWGATLRALQLQPDGNGRLSSQAPTDVWKKVLGA
TAAIKEAPSGILPAFELLCQCLYRLEPQWLPSFVELAQQQGGPGWGAGGPGLPLYRRALA
VLGEEGTRPEALEIELLLGSRRPKAVLQAVGQLVPKEQWEQALEAGLALGPSAPASSEIF
KLVLAEFARHRQLDAHLPLLCCLCPPELTPDELLLLLRAHLPDEGAPPTPFPEPGAEPPL
TLGLLRTLLEQTAAEGRPSGPVLSLYEDILWDLRTPPPTPPRGPVTTLQAAEQPALEAWA
PLGQGPCVTDTGSHL
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcggggcgtcgctgcgcctgctgtccgacctgagcgacttcagctgcgcggcg
cagttccgggagctgctggcccgggatgcggcgatccgcctgcggtgcagcgccgacggc
cgacacctgctgctgcttagcggccccggagcgccggccccacagctgctggtggccgcg
cgcggatcgggcgcggggctggagcgggcctggccagaggcccgggctgcgcccctggac
gccatcttcctatcttggccggcgcggcccgccctggcgctggtgtgggagagcggcctg
gtggagctgtggggcactgacctggggcccgcctggcggcggctgcacaccaccgaacta
tgtccccacggcngcgcccgcgtggcgccggcggcagcgccccggggccgcctggtgtgg
tgcgaggagcgcccggacggcgccggcggccaccgcgtgtgcgtccgcacgctggagccc
ggcggtgagactggtgtccgcttgggccggacgcacgtcctgctgcaccattgccctcct
ttccgtttgctggcctctcgcaaggatgtctttctgggccccactgcctccgcttggcca
ggtgccgcccacatcctgctcacttggaacccgagcaaaggcaaggtgatggtgactgcc
ccgcgcctcggcctgtcctacagtaaaagcctgaatcccaagcagggagatacctgggac
ttccgaacgctgctccgaggctttcctgggttgctgtaccctggagagccactggctgtc
catacctgggccccaactccccagggactgctgttgctggactcgaggggcaccatcatc
ttagttcaggcccatggtggtacccgaaccgtgggcgccctgcaggaggcctctataggt
ctggagagcactgccgctctgggagcattcaatggtacgctggcctgtgtgctgggctcc
accttggaactgctggacatgagcactgggcggctgttggagcggaaggtcctcagtaca
gaccgggtccatttgctagagcccccagcccttgcaatgaaggatggggaggaactagag
acccgaagggggcttcgtttgctttcagccttaggtctgtttcatgtgggttgggaagcc
ccccaatcctttgagctgccttccgccaccgacctggtattcgaggaggcctgtgggtac
taccagcggcgaagcctgcggggtgcccagctcacccccgaggaactgcggcacaatagc
atgttccaagcacctcaagccctcgcctcgatcctccagggtcacctgtccccgtctgca
ctgttgactatcctaagggttgagcttcgggattatcaggggctagagcagctaaaggcc
cagttggtggcaggagaggaggaggaggctgtctggacagagctggcccaccaggaagtg
gcacgcctgttgagaactgagttgacaggagagcagcttgcccagcttaacactgttttc
caggcccttccctcagcagcctggggtgccacccttcgtgccctgcagctccagccagat
ggaaatggcaggctgagctcccaagctcccactgatgtgtggaaaaaagtgctaggggct
acagcagctataaaggaagcccccagtgggatactgcctgcctttgagctcctgtgccag
tgcctgtaccgactggagccgcagtggctcccctctttcgtggagcttgcccagcagcag
ggtgggccaggctggggagctggaggcccagggctgcccctgtaccgtagagccctggct
gtcctaggtgaagaggggaccagacctgaggcactggagatagagctgcttttgggcagc
aggcggcccaaggctgtactgcaagctgtgggccagctggtgccaaaggagcagtgggag
caggctctggaggccggcctagcccttgggccctcagcccctgcttcgagcgagatcttc
aaactggtactggccgagtttgccaggcatcgccaacttgatgctcacctcccccttctc
tgctgcctatgcccaccagagcttactccagatgagctcctgcttctcctgagagcacac
ctcccagatgagggggcaccccccaccccattccctgagccaggggcagagccccctctc
accttgggcttgctcagaaccttgttggagcagactgcggctgaaggacggccctcaggc
ccagtcctaagcctgtacgaggacatcttgtgggacctacgcactccaccccctactcca
cctcggggacctgtgactacactccaggcagcagagcagccagccctggaggcctgggca
ccacttggacagggcccctgtgtgactgacacaggaagtcatttgtag
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