Cavia porcellus (domestic guinea pig): 100720683
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Entry
100720683 CDS
T07777
Symbol
Eftud2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component isoform X2
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100720683 (Eftud2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpoc03041
]
100720683 (Eftud2)
Spliceosome [BR:
cpoc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
100720683 (Eftud2)
Complex C
U5 SnRNP specific factors
100720683 (Eftud2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
100720683
NCBI-ProteinID:
XP_003465783
Ensembl:
ENSCPOG00000010566
UniProt:
A0A286XKS1
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDEDDDELGRETKDLDEMDEDDDDDDVGEQDEDHPGLEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFTLMEQTLPMTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLTL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFVLEPLYKILAQVVGDVDTSLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKLGAKPKIEHTYTGGVDSDLGEAMSDCDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggatactgacttgtatgatgaatttgggaattatattggaccggagcttgattctgat
gaagatgatgatgaattgggcagagaaactaaagatcttgatgagatggacgaggacgat
gatgacgatgatgttggtgagcaagacgaggaccaccctgggttggaggtggtgctgcat
gaggacaagaagtactacccgacggctgaggaggtgtacggccccgaggtggaaaccatc
gtacaggaggaggacacacagccactcacagagcccattattaagcctgtgaagaccaag
aagttcacactgatggagcagacgctgcccatgacagtgtacgagatggacttcttggcg
gatctgatggacaactcagagcttattcgaaatgtgacgctctgtggccatctccaccat
ggcaagacctgttttgtggattgtttaatagagcagacacatccggaaatccgaaagcgc
tacgaccaggatctgtgctacaccgacatcctcttcacagagcaggagagaggtgtgggc
atcaagagcactcctgtgacagtggtcttaccggacaccaaggggaagtcgtacctgttc
aatatcatggatactccaggacacgtgaatttctctgatgaggtcactgctggcctacgc
atctctgatggtgtggtcctgttcattgatgccgcggagggggtgatgctgaacacagag
cggttgatcaagcatgcggtgcaagagaggctggcggtcactgtgtgcattaacaagatc
gaccggctcatcctggagctgaagctgccacccactgacgcctactacaagctgcggcac
attgtggacgaggtcaacgggctgatcagcatgtactccaccgatgagaacctcaccttg
tccccgctgctgggcaacgtctgcttctccagctcccagtacagtatctgcttcacgctg
ggctccttcgccaagatctacgcggacacctttggtgacattaattaccaggaatttgcc
aagagactttggggtgacatctacttcaaccctaagacgcgcaagttcacgaagaaggcc
ccaaccagcagctcccagcggagcttcgtggagtttgtcctggagcctctctacaagatc
ctggcacaggtggtgggtgatgtagacaccagtctccccaggaccctggatgaactcggc
atccacttgaccaaggaggagctgaagctgaacatccggcccctactccgcctagtctgc
aagaagttctttggggaattcacaggcttcgtggacatgtgtgtgcagcacatcccatcc
ccaaagctgggtgccaagcccaagatcgagcacacttacaccggcggcgtggactctgac
ctgggcgaggccatgagtgactgtgaccctgacggcccactgatgtgccacaccaccaag
atgtacagcacggatgatggagtgcagttccacgccttcggccgggtgctgagtggcacc
atccatgccgggcagcccgtgaaagtgctaggggagaactacaccctggaggatgaggag
gactcgcagatctgcaccgtaggccgcctctggatttcagtggccaggtaccacatcgag
gtgaaccgtgttcccgctggcaactgggtcctgatcgaaggggttgaccagccaatcgtg
aagactgcaaccatcactgaaccccgaggcaatgaagaggctcagatcttccggcctttg
aagttcaacaccacatctgtgatcaagattgctgtggagccggtcaatccctcagagctg
cctaagatgcttgacggccttcgaaaagtgaacaagagctacccgtccctcaccaccaag
gtggaggagtcgggtgagcacgtgatcctgggcactggtgagctctacctggactgtgtg
atgcatgacctacggaagatgtattcggagattgacatcaaggtggctgacccagtggtc
acgttctgcgaaacagtggtggaaacgtcttccctcaagtgcttcgctgagacacccaat
aagaagaacaagatcaccatgattgcagagcctctggagaaggggctggctgaggacatc
gagaacgaagtggtgcagatcacgtggaacaggaagaagctgggcgagttcttccagacc
aagtatgactgggatctgctggccgctcgctccatctgggcctttggtcccgatgccact
ggccccaacatcctggtggatgacaccctgccctcagaggtggacaaggcccttctcggc
tctgtgaaagacagcattgtgcagggcttccagtgggggaccagggagggccccctctgt
gacgagctgattcgaaacgtcaagtttaagatcctggatgctgtggtggcccaagagccc
ctgcaccggggcgggggccagatcatccccacggcacggagggtggtttactctgccttc
ctcatggccacaccccgcctgatggagccctactactttgtggaggtgcaggcacccgca
gactgcgtgtctgccgtgtataccgtcttagcccggcgcagggggcacgtgactcaggat
gcacccattccaggctccccgctctacaccatcaaagccttcattccagccatcgattcc
ttcggctttgagactgatctccgcacccacacacagggccaggccttctccctgtctgtc
ttccaccactggcagattgtgcccggcgaccccctggacaaaagcatcgtcatccggccc
ttggagccacagccagccccacatctggctcgagagttcatgatcaagacccggcgcagg
aagggcctgagtgaggatgtgagcatcagcaagttctttgatgaccccatgctgctggag
ctggccaagcaggatgtggtgctcaactatccgatgtga
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integrated database retrieval system
