KEGG   Cavia porcellus (domestic guinea pig): 100723177
Entry
100723177         CDS       T07777                                 
Symbol
Traf4
Name
(RefSeq) TNF receptor-associated factor 4 isoform X1
  KO
K09848  TNF receptor-associated factor 4
Organism
cpoc  Cavia porcellus (domestic guinea pig)
Pathway
cpoc04657  IL-17 signaling pathway
cpoc05200  Pathways in cancer
cpoc05222  Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:cpoc00001]
 09150 Organismal Systems
  09151 Immune system
   04657 IL-17 signaling pathway
    100723177 (Traf4)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    100723177 (Traf4)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    100723177 (Traf4)
SSDB
Motif
Pfam: zf-TRAF TRAF-mep_MATH MATH_2 zf-C3HC4 zf-RING_UBOX zf-C3HC4_2 zf-TRAF_2 zf-Nse zf-RING_5 zf-RING_2 zf-RING_6 TRAF3_RING zf-C3HC4_4 zf-rbx1 Sina_ZnF MATH zf-C2HC_2
Other DBs
NCBI-GeneID: 100723177
NCBI-ProteinID: XP_003469768
Ensembl: ENSCPOG00000025062
UniProt: H0W5B7
LinkDB
Position
Unknown
AA seq 470 aa
MPGFDYKFLEKPKRRLLCPLCGKPMREPVQVSTCGHRFCDTCLQEFLSEGVFKCPEDQLP
LDYAKIYPDPELEVQVLGLPIRCIHSEEGCRWSGPLRHLQGHLNTCSYNVVPCPNRCPAK
LSRRDLPAHLQHDCPKRRLKCEFCGCDFSGEAYESHEGMCPQESVYCENKCGARMMRRLL
AQHATSECPKRTQPCTYCNKEFVFDTIQSHQYQCPRLPVPCPNQCGVGTVAREDLPGHLK
DSCSTALVLCPFKDSGCKHRCPKLAMARHVEDSVKPHLAMMCALVSRQRQELQELRRELE
ELSVGSDGVLIWKIGSYGRRLQEAKAKPNLECFSPAFYTHKYGYKLQVSAFLNGNGSGEG
THLSLYIRVLPGAFDNLLEWPFARRVTFSLLDQSDPGLAKPQHVTETFHPDPNWKNFQKP
GTWRGSLDESSLGFGYPKFISHQDIRKRNYVRDDAVFIRASVELPRKILS
NT seq 1413 nt   +upstreamnt  +downstreamnt
atgcccggcttcgactacaagttcctggagaagcccaagcggcggctcctgtgcccgctg
tgcgggaagcctatgcgcgagcccgtgcaggtttcgacctgcggccaccgcttctgtgac
acctgcctgcaggagtttctcagtgaaggagtcttcaaatgccctgaggaccaacttcct
ctggactacgccaagatctacccagatccagagctggaggtccaggtgttaggtctgccc
atccgctgcatccacagtgaggagggctgccgctggagtgggccgctccgacatctgcag
ggccacctgaatacctgcagctacaatgtagtcccctgccctaatcgctgccccgccaag
ctgagccgccgcgatctacctgcgcacttgcagcatgactgccccaaacggcgcctcaag
tgcgagttctgtggctgtgacttcagtggggaggcctatgagagccatgaaggcatgtgc
cctcaggagagtgtatactgtgagaacaagtgcggtgcccgcatgatgcggcgactgctg
gcccagcacgcgacctccgagtgccccaagcgtacccagccttgcacctactgtaacaag
gagtttgtctttgacaccatccagagtcaccaataccagtgcccaaggttgcctgtgccc
tgtcccaaccagtgtggtgtgggtaccgtggcccgggaggatctgccaggccatctgaag
gacagctgtagtactgccttggtgctgtgcccgttcaaagactccggctgcaagcacagg
tgccctaagctcgcaatggcacgacatgtggaggacagtgtgaagccacatctggctatg
atgtgtgccctggtgagccggcagcggcaggagctgcaggaactgaggcgggagctggaa
gagctctccgttggcagcgacggggtgctaatctggaagattggcagctacggacggcgg
ctacaggaggccaaggccaagcctaacctggagtgcttcagcccagccttctacacacac
aagtatggttataagctgcaggtgtctgcattcctcaacggcaatggcagtggtgagggc
acgcatctctctctctacatccgtgtcctgccaggcgcctttgacaatctcctcgagtgg
ccctttgcccgccgtgtcaccttctccctgctggatcagagtgaccctggcctggctaag
ccacagcatgtcactgagaccttccaccctgacccaaactggaagaatttccaaaagccg
ggcacttggcgaggttccctggatgagagttctctgggctttggataccccaagttcatc
tcccaccaggacatccggaagcgaaactacgtgcgggatgatgctgtgttcatccgggcc
tctgttgaactaccccggaagatcctcagttga

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