Cavia porcellus (domestic guinea pig): 100724238 Help Entry 100724238         CDS       T07777                                  Symbol Ldlr Name (RefSeq) low-density lipoprotein receptor   KO K12473   low-density lipoprotein receptor Organism cpoc  Cavia porcellus (domestic guinea pig) Pathway cpoc03272   Virion - Hepatitis viruses cpoc04144   Endocytosis cpoc04913   Ovarian steroidogenesis cpoc04925   Aldosterone synthesis and secretion cpoc04927   Cortisol synthesis and secretion cpoc04934   Cushing syndrome cpoc04976   Bile secretion cpoc04979   Cholesterol metabolism cpoc05145   Toxoplasmosis cpoc05160   Hepatitis C cpoc05417   Lipid and atherosclerosis Brite KEGG Orthology (KO) [BR:cpoc00001]  09120 Genetic Information Processing   09125 Information processing in viruses    03272 Virion - Hepatitis viruses     100724238 (Ldlr)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     100724238 (Ldlr)  09150 Organismal Systems   09152 Endocrine system    04913 Ovarian steroidogenesis     100724238 (Ldlr)    04925 Aldosterone synthesis and secretion     100724238 (Ldlr)    04927 Cortisol synthesis and secretion     100724238 (Ldlr)   09154 Digestive system    04976 Bile secretion     100724238 (Ldlr)    04979 Cholesterol metabolism     100724238 (Ldlr)  09160 Human Diseases   09172 Infectious disease: viral    05160 Hepatitis C     100724238 (Ldlr)   09174 Infectious disease: parasitic    05145 Toxoplasmosis     100724238 (Ldlr)   09166 Cardiovascular disease    05417 Lipid and atherosclerosis     100724238 (Ldlr)   09167 Endocrine and metabolic disease    04934 Cushing syndrome     100724238 (Ldlr)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:cpoc04131]     100724238 (Ldlr) Membrane trafficking [BR:cpoc04131]  Endocytosis   Clathrin-mediated endocytosis    Low-density lipoprotein receptor (LDLR) family proteins     100724238 (Ldlr) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Ldl_recept_a Ldl_recept_b cEGF FXa_inhibition SGL EGF_CA EGF EGF_3 hEGF Motif Other DBs NCBI-GeneID:  100724238 NCBI-ProteinID:  XP_013005381 LinkDB All DBs Position Unknown AA seq 1006 aa AA seqDB search MRGCMCGHPPSGQARLAGAAAACCRAPSCTVARPAERLPPTVPVPVGTSTSAWRCPSPSP QTPATPTLHITVPQPRASTPPIPAQRLRQEDLRFTSSRHKGCRPEPPEAGKKSQSPIKEP RVCVIELVSTLEPSPGLNQGFSSASASSSEDGLWSLGAPPPTEHPLLAAGATAEAKCAKN EFQCRDGKCISYTWVCDGGAECQDGSDESQETCMAATCKAGDFSCGGRLSRCIPSSWRCD GQEDCHSGADERGCPPKTCAVDEFRCGDGRCISRQFVCDGEPDCEDGSDEATCSVTCSPN SFQCNSSACIPELWACDGEPDCKDGSDEWPQHCGDRTTSAPLGPSGPCSSLEFHCGSGEC IHSSWRCDRDPDCKDQSDEEGCAVATCRPDEFQCMDGTCVHGSRQCNREYDCQDMSDEVG CVNVTLCEGPDKFKCHTGECITLDRVCDGARDCRDWSDEPLKECGTNECLDNNGGCSHVC NDLKIGYQCLCPSGFHLVGQWQCEDIDECQQPDTCSQLCVNLEGSYKCECEDGFHMDAST KTCKAVGSVAYLLFTNRHEVRRMTPDRSEYTSLVSNLKNVVALDAEVASNRLYWSDVSQR KIYSTQIDRTPGSAHDTVISGDLQAPDGLAVDWIHGNIYWTDSVPGTVSVADTRGVKRRT LFQKKGSKPRAIVVDPVHGFMYWTDWGTPARIEKGGLNGVDIYSLVTENIEWPNGITLDL SSSRLYWVDSKLHSISSIDVNGRDRKTILEDEKRLAHPFSLAIFEDKIFWTDIMNEAIFS VNRLTGLDVHLVVENLLSPEDIVLFHNVTQPKGVNWCESTALPNGGCQYLCLPAPQINPH SPKFTCACPDGMVLAQDMRSCVTEPESVTTPVPPGTRPEVSTTAVRPKQAGEQPAPTTPR RPESTAGLTTAESVTRSQDVADAAGRGDKPRGVGALTIALPIGLLTLLCLGAFLVWKNWR LKSINSINFDNPVYQKTTEDEVHICRSQDGYSYPSRQMVSLEDDMA NT seq 3021 nt NT seq  +upstreamnt  +downstreamnt atgcgcgggtgcatgtgtggccacccaccctccgggcaggccaggctcgcgggtgccgcc gcggcttgctgccgtgccccctcctgcactgtggcccggccggccgagcggttgcctccc acagtcccagtacccgtgggcacttccacctcagcctggcgctgccccagcccatctccc cagaccccggccacacccacacttcacattacagtcccgcagcccagggccagtacaccc ccgatcccagctcagaggctgaggcaggaggacctcaggttcaccagcagccggcacaag ggctgcaggccggagcctccggaagctggaaagaagtcccagtcgcccatcaaggagccg agggtgtgtgtcattgagctggtgtccaccttggagccatcgcccggcctcaaccagggc ttctcaagcgcctcagcctccagctctgaggacggcttgtggtctctgggagcgccccct cccacggagcatcccctcctggcggccggcgctacagcggaagccaagtgtgccaagaac gagttccagtgccgggacgggaagtgcatctcctacacgtgggtgtgcgacggcggcgcc gagtgccaggacggctctgatgagtcccaggaaacctgcatggctgccacctgcaaagca ggcgacttcagctgcgggggccgcttgagccgctgcatccccagctcctggaggtgcgac ggccaggaagactgccacagcggtgccgacgagcgaggctgcccccccaagacgtgtgcc gtggacgagttccgctgcggggacggccggtgcatctctcggcagtttgtctgcgacggt gagcccgactgcgaggatggttcggacgaggccacctgctcggtgacctgcagccccaac agcttccagtgcaactcctccgcgtgcatccccgagctgtgggcctgcgacggcgagccg gactgcaaggacggctccgacgagtggccgcagcactgcggggaccgcaccacgtcggcg cccctggggcccagcgggccgtgctcctccctggagttccactgtggcagcggcgagtgc atccacagcagctggcgctgcgacagggaccccgactgcaaggaccagtctgacgaggag ggctgcgcggtggccacctgccgccccgacgagttccagtgcatggacggcacctgtgtc cacggcagccgccagtgcaacagagaatacgactgccaggacatgagcgatgaggtcggc tgtgtcaacgtgacgctctgtgagggccccgacaagttcaagtgccacactggcgagtgc atcacgctggacagagtgtgcgacggggcccgggactgtcgagactggtcggatgaaccc ctcaaggagtgtgggaccaacgagtgcttggacaacaatgggggctgttcccacgtctgc aatgacctcaagatcgggtaccagtgcttgtgccccagcggcttccacctggtgggccag tggcagtgtgaagacatcgatgagtgtcagcagcctgacacctgcagccagctgtgcgtg aacctggaaggctcctacaagtgcgagtgtgaggacggcttccacatggacgccagcacc aagacctgcaaggccgtgggctctgtcgcctacctgctcttcaccaaccgccacgaggtg cgcaggatgacgccggaccgtagcgagtacaccagcctggtctccaacctgaagaacgtg gtggccctggacgccgaggtggccagcaaccggctctactggtccgacgtgtcccagagg aagatctacagcactcagatcgacaggacccccggctctgcacacgacactgtcatcagc ggggacctccaggcccctgacggactggctgtggactggatccacgggaacatctactgg accgactcggtccccggcacagtgtccgtggctgacacccgaggtgtgaagaggaggact cttttccagaagaaaggctccaagcccagggccattgtggtggaccctgtgcatggcttc atgtactggacagactgggggacccccgccaggatcgagaaagggggcctgaatggcgtg gacatctactcgcttgtgacagaaaacatcgagtggcccaatggcatcacactggatctc tccagcagccgcctgtactgggttgactcaaaactgcattccatctccagtattgacgtc aatggcagagacaggaagaccatcttggaggatgagaagcggctggctcaccccttctcc ttggccatctttgaggacaaaatattctggacagatatcatgaatgaagctattttcagt gtcaaccgccttacaggcttggatgttcatttagtggttgaaaatctgttatctcctgaa gacattgtcctgttccacaatgtcacacagccgaaaggggtgaactggtgtgaaagtacc gccctccccaatggaggctgccagtacctgtgtctaccagccccacagatcaacccccac tcccccaagttcacctgtgcgtgcccggatgggatggtgctggcccaggacatgaggagc tgtgtcacagagcctgagtctgtgaccaccccagtgccacccggcaccaggccggaagtc agcaccacggctgtcaggcctaagcaggcgggagagcagcctgcacccaccacacccagg cggcctgagtccactgctgggctcaccacagcggagtcagtgaccaggtcccaagatgtg gccgatgctgccggcagaggggataagccacgtggtgtgggggccctgaccatcgccctc cccatcgggctgctcactctcctctgcctcggtgccttcctggtctggaagaactggcgg ctcaagagcatcaacagcatcaacttcgacaacccagtgtaccagaagaccacggaggat gaggtgcacatctgccgcagccaggacggctacagctacccctcaagacagatggtcagc ctggaagacgatatggcgtga

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