Cavia porcellus (domestic guinea pig): 100724447 Help Entry 100724447         CDS       T07777                                  Symbol Traf6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism cpoc  Cavia porcellus (domestic guinea pig) Pathway cpoc04010   MAPK signaling pathway cpoc04064   NF-kappa B signaling pathway cpoc04120   Ubiquitin mediated proteolysis cpoc04140   Autophagy - animal cpoc04144   Endocytosis cpoc04380   Osteoclast differentiation cpoc04517   IgSF CAM signaling cpoc04620   Toll-like receptor signaling pathway cpoc04621   NOD-like receptor signaling pathway cpoc04622   RIG-I-like receptor signaling pathway cpoc04657   IL-17 signaling pathway cpoc04722   Neurotrophin signaling pathway cpoc04936   Alcoholic liver disease cpoc05132   Salmonella infection cpoc05133   Pertussis cpoc05135   Yersinia infection cpoc05140   Leishmaniasis cpoc05142   Chagas disease cpoc05145   Toxoplasmosis cpoc05152   Tuberculosis cpoc05160   Hepatitis C cpoc05161   Hepatitis B cpoc05162   Measles cpoc05168   Herpes simplex virus 1 infection cpoc05169   Epstein-Barr virus infection cpoc05170   Human immunodeficiency virus 1 infection cpoc05171   Coronavirus disease - COVID-19 cpoc05200   Pathways in cancer cpoc05222   Small cell lung cancer cpoc05235   PD-L1 expression and PD-1 checkpoint pathway in cancer cpoc05417   Lipid and atherosclerosis Brite KEGG Orthology (KO) [BR:cpoc00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     100724447 (Traf6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     100724447 (Traf6)    04064 NF-kappa B signaling pathway     100724447 (Traf6)   09133 Signaling molecules and interaction    04517 IgSF CAM signaling     100724447 (Traf6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     100724447 (Traf6)    04140 Autophagy - animal     100724447 (Traf6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     100724447 (Traf6)    04621 NOD-like receptor signaling pathway     100724447 (Traf6)    04622 RIG-I-like receptor signaling pathway     100724447 (Traf6)    04657 IL-17 signaling pathway     100724447 (Traf6)   09156 Nervous system    04722 Neurotrophin signaling pathway     100724447 (Traf6)   09158 Development and regeneration    04380 Osteoclast differentiation     100724447 (Traf6)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     100724447 (Traf6)    05235 PD-L1 expression and PD-1 checkpoint pathway in cancer     100724447 (Traf6)   09162 Cancer: specific types    05222 Small cell lung cancer     100724447 (Traf6)   09172 Infectious disease: viral    05170 Human immunodeficiency virus 1 infection     100724447 (Traf6)    05161 Hepatitis B     100724447 (Traf6)    05160 Hepatitis C     100724447 (Traf6)    05171 Coronavirus disease - COVID-19     100724447 (Traf6)    05162 Measles     100724447 (Traf6)    05168 Herpes simplex virus 1 infection     100724447 (Traf6)    05169 Epstein-Barr virus infection     100724447 (Traf6)   09171 Infectious disease: bacterial    05132 Salmonella infection     100724447 (Traf6)    05135 Yersinia infection     100724447 (Traf6)    05133 Pertussis     100724447 (Traf6)    05152 Tuberculosis     100724447 (Traf6)   09174 Infectious disease: parasitic    05145 Toxoplasmosis     100724447 (Traf6)    05140 Leishmaniasis     100724447 (Traf6)    05142 Chagas disease     100724447 (Traf6)   09166 Cardiovascular disease    05417 Lipid and atherosclerosis     100724447 (Traf6)   09167 Endocrine and metabolic disease    04936 Alcoholic liver disease     100724447 (Traf6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:cpoc04131]     100724447 (Traf6)    04121 Ubiquitin system [BR:cpoc04121]     100724447 (Traf6) Enzymes [BR:cpoc01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      100724447 (Traf6) Membrane trafficking [BR:cpoc04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     100724447 (Traf6) Ubiquitin system [BR:cpoc04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     100724447 (Traf6) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF TRAF6_Z2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 zf-TRAF_2 zf-RING_5 TRAF3_RING RING_XB3-XBAT31 SlyX Spc29 U-box zf-RING_11 PUMA_CC DUF3450 CCDC39 Myosin_tail_1 DUF4455 DUF16 Med21 AAA_13 DUF7607 HMMR_N ADIP ATG16 DUF1664 PspA_IM30 DUF7310 DUF948 DM Motif Other DBs NCBI-GeneID:  100724447 NCBI-ProteinID:  XP_003463882 Ensembl:  ENSCPOG00000004507 UniProt:  H0V3B1 LinkDB All DBs Position Unknown AA seq 543 aa AA seqDB search MSLLNCENSCGSSQSESDCCTAMASSCSTAAKDDSVSGMTSTSTGTLSGSFMEEIQGYDV EFDPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLF PDNFAKREILSLMVKCPNEGCLHKMELRHLEDHQAHCEFALINCLQCQRPIQKCQLNIHI LKDCPRRQVSCINCAVSMAFEEKEIHDQNCPLANVICEYCHTVLIREQMPTHYDLDCPTA PVPCTFSTFGCHEKMQRNHLARHLQENTQSHMRMLAQAVHSLNLALTPAPPRDMLPYDSA SLSRVSSGCHSEVQNFQETIQQLEGRLVRQDHQIRELTAKMETQCTYVSELKRTIRTLED KVAEIEAQQCNGIYIWKIGNFGMHLKSQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPT AQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILDQSEAPVRQNHEEIMDAKPELLAF QRPTIPRNPKGFGYVTFMHLEALRQRTFIKDDTLLVRCEVSTRFDMGGLRKEGFQARSTD VGV NT seq 1632 nt NT seq  +upstreamnt  +downstreamnt atgagtctgttaaactgtgaaaacagctgtggatccagccagtctgagagtgactgctgc actgccatggccagctcctgcagcactgcagcaaaggatgacagtgtgagcgggatgacc agcaccagcacagggaccctgtccggctccttcatggaagagatccaggggtacgatgtg gagttcgacccgcccctggagagcaagtacgagtgccctatctgcttgatggctctgcgg gaagccgtgcagacgccctgtggccataggttctgcaaagcctgcatcatcaaatcaata agggatgcaggtcacaaatgtcccgttgacaatgaaattctactggaaaatcaactattt cctgacaattttgcaaaacgagagattctttctctcatggtgaaatgtccaaatgaaggc tgcttgcacaagatggaactgaggcatcttgaggatcatcaagcacattgtgagtttgct cttattaattgtctccaatgccaacgcccaattcaaaaatgccagcttaatattcatatc ctcaaggactgtccaagaagacaagtttcttgtataaactgtgctgtatccatggcattt gaagaaaaagagatccatgaccagaactgccctttggcaaatgtcatctgtgaatactgc cacaccgtgctcatcagagaacagatgcctactcactatgacctagactgtcctacggcc ccagtcccatgcaccttcagtacttttggttgccatgagaagatgcagaggaatcacttg gcacgacacctacaagagaatacccaatcgcacatgagaatgctggcccaggctgttcat agtttaaaccttgctttaactcccgcgcctccgcgtgatatgctgccatatgattctgcc tctctgtcccgggtttcctctgggtgccactcagaggtccagaatttccaggaaaccatt caacaattagagggtcgccttgtaagacaagaccatcaaatccgggagctaacagctaag atggaaactcagtgtacgtatgtaagtgagcttaaacgaactattcgaaccctcgaggac aaagttgcggaaatcgaagcacaacagtgcaatgggatttacatttggaagattggcaac ttcgggatgcacttaaagtctcaggaagaggagaagcctgttgtcatccatagccctgga ttctacacaggcaaacctgggtacaaactgtgcatgcgcctgcaccttcagttaccaact gctcagcgctgtgcaaactatatatccctgttcgtccacacaatgcaaggagagtatgac agccacctcccttggcccttccaggggacaatacggcttacaattctcgatcagtctgaa gcaccagtaaggcaaaaccatgaagagataatggatgccaaaccagagctgctagccttc cagcggcccacaatcccacggaacccaaaaggttttggctatgtaactttcatgcacctg gaagccctgagacaaagaaccttcattaaggacgatacgttactagtgcgctgtgaagtt tctacccgctttgacatgggtggccttcgaaaggagggttttcaggcacgaagtactgat gtaggggtgtag

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