Cavia porcellus (domestic guinea pig): 100726314
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Entry
100726314 CDS
T07777
Symbol
Dhx9
Name
(RefSeq) ATP-dependent RNA helicase A isoform X1
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpoc03041
]
100726314 (Dhx9)
03012 Translation factors [BR:
cpoc03012
]
100726314 (Dhx9)
Enzymes [BR:
cpoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
100726314 (Dhx9)
5.6.2.6 RNA 3'-5' helicase
100726314 (Dhx9)
Spliceosome [BR:
cpoc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
100726314 (Dhx9)
Translation factors [BR:
cpoc03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
100726314 (Dhx9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
DEAD
HA2_N
HA2_C
nSTAND3
Dicer_dimer
ResIII
AAA_19
AAA_14
ATPase
AAA_22
PhoH
Motif
Other DBs
NCBI-GeneID:
100726314
NCBI-ProteinID:
XP_005005885
Ensembl:
ENSCPOG00000040669
LinkDB
All DBs
Position
Unknown
AA seq
1406 aa
AA seq
DB search
MGDIKNFLYAWCGKRKMTPAYEFRAVGNKNRQKFMCEVRVEGFNYTGMGNSTNKKDAQSN
AARDFVNYLVRINEVKSEEVPTVGIAPPPPPVTEATDTATTDAGKNSESLPTTMGGPLPP
HLALKAENDSGAGASGFGAASGSTWELGTDVKDFFPKKEDPDGEGRGTNMKDYYSRKEEQ
EVEATLESEEVDLNAGLHGNWTLENAKARLNQYFQKEKIQGEYKYTQVGPDHNRSFIAEM
TIYIKQLGRRIFAREHGSNKKLAAQSCALSLVRQLYHLEVIEAYSGLTKKKEGERVEPYR
VNISPDLEHQLINVIQELNLEIVPPPIDPSMPVLFNTGKLAHFEPSQRQNQIGVVPWSPP
QSNWNPWTSCNIDEGPLAYATPEQISMDLKNELMCQLEHDQDLQAVLQERESLPVKKFES
EILEAINQNSVVIIRGATGCGKTTQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAE
RVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKLEAGIRGISHVIVDEIHE
RDINTDFLLVVLRDVVLAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTFPVQEYFL
EDCIQMTQFVPPPKDKKKKDKEEDSGEDDDANCNLICGDEYGPETKLSMSQLNEKETPFE
LIEALLKYIETLNVPGAVLVFLPGWNLICTMQKHLEMNPHFGSHRYQILPLHSQIPREEQ
RKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASK
TNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIALSIKLLRLGGIGQ
FLAKAIEPPPLDAVIEAEHTLRELDALDINDELTPLGRILAKLPIEPRFGKMMIMGCIFY
VGDAVCTIAAATCFPEPFISEGKRLGYIHRNFAGNRFSDHVALLSVFQAWDDARMGGEEA
EIRFCEHKRLNMATLRMTWEAKVQLKEILLNSGFPEECLLTQVFTNTGPDNNLDVVISLL
AFGVYPNVCYHKEKRKILTTEGRNALIHKSSVNCPFSSQDMKYPSPFFVFGEKIRTRAIS
AKGMTLVTPLQLLLFASKKVQSDGQIVFVDDWIRLQISHAAAACITALRAAMEALVVEVT
KQPNIISQLDPVNEHMLNMIRQISRPSAAGISLMIGAARYGDGPRPPKMARYDNGSGYRR
GSGYGGGGYGTGGYGGGGGGYGSGGYGGGGYGGGGYGGGSNSYRRGYGGGYRGFRGGYRG
NFGGDYRGSSGDYRGPSGGDFRGPNGGDFRGPNGGDFRGPNGGDFRGPNGGDFRGPGGGD
YRGPGGGDYRGPGGGDYRGPGGGDYRGPGGGDYRGPGGGDYRGPGGGDFRGHGGGGYRGS
GGFQRGGGRGGFGGGYFGQGRGGGGY
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacattaaaaattttctgtatgcctggtgtggcaaaaggaagatgactccagcc
tatgaatttagagcagtagggaacaaaaaccgtcagaagttcatgtgtgaggttcgtgta
gaagggtttaattatactggcatgggcaattctactaataaaaaagatgcacagagcaat
gctgccagagactttgttaactatttggttcgaataaatgaagtaaagagtgaagaagtt
ccaactgttgggattgcacctcccccacctccagttactgaagctactgacactgctact
actgatgctggaaaaaacagtgaaagtttaccaaccaccatgggaggacctcttccacca
catctggctctcaaggcagaaaatgattctggagctggagcatctggctttggtgctgct
tctggatccacctgggaactgggtaccgatgtgaaggacttcttcccaaaaaaggaggac
ccagacggagaaggccggggaaccaatatgaaggactactactcaagaaaggaggaacaa
gaagtagaagcgactctagaatcagaagaagtggatttaaatgctgggcttcatggaaac
tggactttagaaaacgctaaggctcgcctgaaccaatatttccaaaaggaaaagatccaa
ggggaatataagtacacccaagtgggtcctgatcacaacaggagctttattgccgaaatg
accatttatatcaagcaactgggcagaaggatttttgcacgtgaacatggatcaaataaa
aagttggcagcacagtcctgtgctctgtcacttgtcagacagctctatcatcttgaagta
attgaagcttattctggacttacaaagaagaaagaaggagagagagtggagccttacaga
gttaacatttctcctgatttagagcatcagttgataaatgtgattcaagagctaaatctt
gaaattgtgcctccacctattgatccttctatgccagttctattcaacactgggaaactg
gctcactttgaaccatctcaacgacaaaaccaaataggtgtggttccttggtcacctcca
caatccaactggaatccttggactagttgtaacattgatgaggggcccctggcttatgct
actccagaacaaataagtatggatcttaagaatgaattaatgtgccagctagaacatgat
caagatttgcaagcagtcttacaggagagagagtctctacctgtgaagaaatttgaaagt
gaaatcctggaagcaattaatcaaaattcagttgttattatccgaggggctactggatgt
ggtaaaaccacacaggttccacagtttatcctggatgactttatccagaatgatcgagca
gcagagtgtaatattgtagtaactcagcctaggaggatcagtgcagtctctgtggcagag
cgagttgcgtatgaaagaggagaggagcctggaaaaagctgtggctacagtgttcgattt
gagtctatacttccccgtcctcatgccagcataatgttttgtactgtaggtgttctattg
agaaaattagaagcaggcattcgaggaatcagtcatgtaattgttgatgaaatacacgaa
agagacattaatactgactttcttttggtggtcttgcgtgatgtggttctggcttatcct
gaagttcgcattgtacttatgtctgctactattgacaccagtatgttttgtgaatatttc
ttcaattgccctatcattgaagtttatgggagaactttcccagttcaagagtattttttg
gaagactgtattcagatgacccagtttgttcctccaccaaaggacaagaaaaagaaggat
aaggaagaggatagtggtgaggatgatgatgcgaattgcaacttgatctgtggtgatgaa
tatggtccagaaacaaagttgagcatgtctcagttgaatgaaaaggaaactccttttgaa
ctcattgaagctcttcttaagtacattgaaacccttaatgttcctggagctgtgttggtt
tttttgcctggctggaacttgatctgtactatgcagaagcatttggaaatgaatccacat
tttggaagccataggtatcagattctacctctgcattctcagattccacgagaagaacag
cgcaaagtgtttgatccagtaccagttggagtaaccaaggttattttgtccacaaatatt
gctgaaacgagcattaccataaatgatgttgtttatgtcattgactcttgcaaacaaaaa
gtgaaactatttacggctcacaacaacatgaccaactatgctacagtctgggcatccaaa
acaaaccttgaacagcgtaaaggccgagctggtcgtgtgcggcctggattttgctttcac
ctctgtagccgagcccgttttgagagactcgaaacccatatgacaccagagatgtttcga
acaccattgcatgaaattgctttgagcataaaacttctgcgtctgggaggaattggccag
ttcttggccaaagcaattgaacctccacctttggatgctgtgattgaagcagagcatact
cttagagagcttgatgcattagatatcaatgatgaattgactcctctaggacgaatcctg
gctaaactccccattgagccccgttttggaaaaatgatgataatgggatgtattttctat
gtgggagatgctgtctgtaccattgctgctgctacctgctttccagagcctttcatcagt
gaagggaagagactgggctatatccatcgaaattttgcaggaaacagattttctgaccat
gtggcacttttgtcagtatttcaagcctgggatgatgctagaatgggtggagaagaagca
gagatacgtttttgtgaacacaaaagactcaatatggctacattaagaatgacttgggag
gccaaagttcaacttaaagaaattttgcttaattctggttttccagaagagtgtttgttg
acacaagtgtttactaacactggaccagataataatttggatgttgttatctctctcctg
gcttttggtgtataccccaatgtgtgctatcataaggaaaagagaaaaattcttaccact
gaagggcgtaacgcacttatccataagtcatctgttaattgtccatttagcagccaagac
atgaagtacccttctcccttctttgtatttggtgaaaagattcgaacccgagccatctct
gctaaaggcatgaccttagttactcccttgcagttgcttctgtttgcctccaagaaagtc
cagtctgatggacagattgtgtttgtagatgactggatcagactgcaaatttctcatgct
gcagctgcctgtattactgccctccgggcagccatggaagctctggttgttgaagtaacc
aaacaacctaacatcatcagtcaattggaccctgtaaatgaacatatgttgaacatgatc
cgacaaatctctcggccctcagcagctggtataagccttatgattggtgctgcacggtat
ggagatggtccacgtcctcccaagatggctcgatatgataatggaagtggatatagaagg
ggttctggatatggtggtggaggctatggcactggaggctatggtggtggtggtggaggt
tatggtagtggaggatatggcggtggaggatatggcggtggaggatatggagggggctcc
aattcctatcgaagaggatatggtggaggctatagaggtttccgggggggttatagaggc
aactttggtggagactacaggggatctagtggagactacaggggacctagtggaggagac
ttccgaggacccaatggaggagacttccggggacccaatgggggagacttccggggaccc
aatgggggagacttccgaggacccaatgggggagacttccgaggacccggtgggggagac
tacagaggacccggtgggggagactacagaggacctggtgggggagactatagaggaccc
ggtgggggagactacagaggtcctggtgggggagactacagaggacccggtgggggagac
tacagaggacccggtgggggagatttcagaggacatggtggaggaggctacagagggtct
gggggattccagcgaggaggtggcagaggaggctttggaggcggctattttggacaagga
agaggaggtggtggctattaa
DBGET
integrated database retrieval system
