Cavia porcellus (domestic guinea pig): 100727882
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Entry
100727882 CDS
T07777
Symbol
Thbs1
Name
(RefSeq) LOW QUALITY PROTEIN: thrombospondin-1
KO
K16857
thrombospondin 1
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc04015
Rap1 signaling pathway
cpoc04115
p53 signaling pathway
cpoc04145
Phagosome
cpoc04148
Efferocytosis
cpoc04151
PI3K-Akt signaling pathway
cpoc04350
TGF-beta signaling pathway
cpoc04510
Focal adhesion
cpoc04512
ECM-receptor interaction
cpoc04820
Cytoskeleton in muscle cells
cpoc05144
Malaria
cpoc05165
Human papillomavirus infection
cpoc05205
Proteoglycans in cancer
cpoc05206
MicroRNAs in cancer
cpoc05219
Bladder cancer
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
100727882 (Thbs1)
04350 TGF-beta signaling pathway
100727882 (Thbs1)
04151 PI3K-Akt signaling pathway
100727882 (Thbs1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100727882 (Thbs1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100727882 (Thbs1)
04148 Efferocytosis
100727882 (Thbs1)
09143 Cell growth and death
04115 p53 signaling pathway
100727882 (Thbs1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
100727882 (Thbs1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100727882 (Thbs1)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
100727882 (Thbs1)
05205 Proteoglycans in cancer
100727882 (Thbs1)
09162 Cancer: specific types
05219 Bladder cancer
100727882 (Thbs1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
100727882 (Thbs1)
09174 Infectious disease: parasitic
05144 Malaria
100727882 (Thbs1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpoc04131
]
100727882 (Thbs1)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cpoc00536
]
100727882 (Thbs1)
Membrane trafficking [BR:
cpoc04131
]
Endocytosis
Phagocytosis
Opsonins
100727882 (Thbs1)
Glycosaminoglycan binding proteins [BR:
cpoc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100727882 (Thbs1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
TSP1_CFP_C
EGF_3
TSP1_ADAMTS
cEGF
EGF_CA
Laminin_G_3
TSP1_CCN
Laminin_G_2
EGF
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
100727882
NCBI-ProteinID:
XP_013014293
Ensembl:
ENSCPOG00000014779
LinkDB
All DBs
Position
Unknown
AA seq
1171 aa
AA seq
DB search
MGLAWGLSVLFLVHVCGTNRIPESGGDNSVFDIFELTGATRKGSGRRLVKGPDPSSPAFR
IENANLIPPVPDDKFQDLVDAVRAEKGFLLLASLRQLKKTRGTLLAVERKDQSGQIFSVV
SNGKAGTLDLSLSAQGKQQVVSVEEALLATGQWKSITLFVQEDRAQLYIDCEKMENAELD
VPIQNIFTRDLANIARLRIAKGDVNGNFQGVLQNVRFVFGTTPEDILRNKGCSSSATNVL
LTLNNNVVNGSSPAIRTNYIGHKTKDLQAICGISCEELSSMFLELRGLRTIVTTLQDSIR
KVTEENKELANELRRPPLCYHNGVQYRNNEEWTVDSCTECHCQNSVTICKKVSCPIMPCS
NATVPDGECCPRCWPSDSADDGWSPWSEWTACSVTCGNGIQQRGRSCDSLNNRCEGSSVQ
TRTCHIQECDKRFKQDGGWSHWSPWSSCSVTCGDGVITRIRLCNSPSPQMNGKPCEGEAR
ETKPCKRDACPINGGWGPWSLWDICSVTCGGGVQKRSRLCNNPMPQFGGKDCIGDVTETQ
VCNTQECPIDGCLSNPCFAGTKCTSYPDGSWKCGACPAGYSGNGIQCKDVDECREVPDAC
FNHNGEHRCKNTDPGYNCLPCPPRFTGTQPFGRGVEHATANKQVCKPRNPCTDGTHNCNK
NAKCNYLGHYSDPMYRCECKPGYAGNGIICGEDTDLDGWPNEDLLCVANATYHCKKDNCP
NLPNSGQEDYDKDGIGXCPGDDDDHDNFPDDRDNCPFHYNPAQYDYDRDDVGDRCDNCPY
NHNPDQADTDNNGEGDACAADIDGDGILNERDNCQYVYNVDQRDTDMDGVGDQCDNCPLE
HNPDQLDSDSDRIGDTCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDACDHDDD
NDGIPDDRDNCRLVPNPDQKDSDGDGRGDACKDDFDHDNVPDIDDICPENVDISETDFRR
FQMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAIGFDEFNAVDFSGTFFINTERD
DDYAGFVFGYQSSSRFYVVMWKQVTQSYWDTNPTRAQGYSGLSVKVVNSTTGPGEHLRNA
LWHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGFIRVVMYEGKKIMADSGPIY
DKTYAGGRLGLFVFSQEMVFFSDLKYECRDS
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atggggctggcctggggactcagcgtcctgttcctagtacatgtgtgtggcaccaacaga
attccagaatctgggggagacaacagcgtatttgacatctttgaactcaccggggccaca
cgcaagggctctgggcgccggctggtgaagggccctgacccatctagcccagctttccgc
attgagaatgccaacctgatcccccctgtgcctgatgacaagttccaagacctagtggat
gccgtgcgggcagagaaaggcttcctcctactggcctcactcaggcagctgaagaagacc
aggggcacactgctggcagtggaacggaaagaccagtcaggccagattttcagtgtggtc
tccaacggcaaggcaggaaccctggacctgagcctgagtgcgcagggcaagcagcaggtg
gtgtcggtagaggaagcactcctggccactggccagtggaagagcatcaccctattcgtg
caggaagacagggcccagctgtacattgactgcgagaagatggagaatgccgagctggat
gtccccatccaaaacatctttaccagggacctggccaacatcgccaggctccgcattgca
aagggagacgtcaatggcaattttcagggggtgctgcagaatgtgaggttcgtctttgga
accacaccagaagacatcctcaggaacaaaggctgctccagctctgccaccaatgtcctt
ctcaccctcaacaacaacgtggtgaatgggtctagccctgccatccgcactaactacatt
ggccacaagacaaaggacctgcaggccatctgtggcatctcctgtgaagagctgtctagc
atgttcctggagctcaggggcctgcgcaccattgtgaccacgctgcaggacagtatccga
aaagtgacggaagagaacaaagaattggccaatgagctgaggcggcctccactctgctat
cacaacggagttcagtacaggaataatgaggaatggactgtggatagctgcaccgagtgt
cactgtcagaactcagttaccatctgcaaaaaggtgtcctgccccatcatgccctgctcc
aatgccacagttcccgatggcgagtgctgcccacggtgttggcccagcgactctgcagat
gatggctggtcgccctggtcagagtggaccgcctgttccgtaacatgtggcaatggaatt
cagcagcgcggccggtcttgcgacagcctcaacaaccgatgcgagggctcttctgtccag
acacggacctgtcacattcaggagtgtgacaagagatttaaacaggatggtggctggagc
cactggtccccatggtcaagctgttctgtgacatgtggtgatggtgtgatcacaaggatt
cggctctgcaactctcccagcccccagatgaatggcaaaccatgtgaaggcgaagcccgg
gagaccaaaccctgcaagagagacgcctgtcccatcaatggaggctgggggccctggtcg
ctgtgggacatctgctctgtcacctgtggaggaggagtgcagaaacgtagccggctgtgc
aacaaccccatgccacagtttggaggcaaagactgcattggtgatgtgacagaaacccaa
gtgtgcaacacgcaggaatgtccaattgatggatgcctgtccaatccttgctttgctggg
accaagtgtaccagctatcctgatggcagctggaaatgtggcgcttgtcctgctggttac
agtggaaacggcatccagtgcaaagacgttgatgagtgcagagaggtgcctgacgcttgc
tttaaccacaatggagaacacaggtgcaagaacaccgatcctgggtacaactgcctgccc
tgcccaccacgtttcacgggcacacagccctttggccggggtgttgaacatgccacagcc
aacaaacaggtgtgcaagccccgaaacccctgcacagacgggacacacaactgcaacaag
aatgccaagtgcaactacctgggccactacagcgaccccatgtaccgctgcgagtgtaag
cctggttacgctggcaatggcatcatctgcggggaggacacagacttggatggctggcct
aatgaggacctgttgtgcgtggccaatgcgacctaccactgcaaaaaggacaattgtccc
aacctccctaattcagggcaggaagactatgacaaggatggaattgggtgatgccctggt
gatgatgatgatcatgataacttcccagatgatagggacaactgtccattccattacaac
ccagcccagtatgactatgacagagatgacgtgggagaccgctgtgacaactgcccgtac
aaccacaacccagaccaggcagacacagacaacaatggggaaggagacgcctgcgctgca
gacatcgatggagatggtatcctcaatgaacgagacaactgccagtatgtctacaacgtg
gaccagagggacactgatatggatggggttggggatcagtgtgacaactgccccttggag
cataatccggatcagctggactctgactcagaccgcattggagacacttgtgacaacaat
caggacattgatgaagatggccaccagaacaatctggacaactgtccctatgtgcccaat
gccaaccaggctgatcatgacaaagatggaaagggagatgcctgtgaccatgatgacgac
aatgatggcattcccgatgacagggacaattgcaggctggtgcccaatcctgaccagaag
gactctgatggtgatggtcgaggcgatgcttgcaaagatgactttgaccatgacaatgtg
ccagacatcgatgacatctgtcctgagaatgttgacatcagtgagactgatttccgccga
ttccagatgattcctctagatcccaaaggaacatcgcaaaatgacccgaactgggttgta
cgccatcagggtaaagagctcgtccagactgtcaactgcgatcctggccttgctataggt
tttgatgaatttaatgctgtggacttcagcggcaccttcttcatcaatactgaaagagat
gatgactacgctggctttgtgtttggctaccagtccagcagccgcttctacgttgttatg
tggaagcaggtcacccagtcttactgggacacgaaccccaccagagcacagggatactcg
ggcctttctgtgaaagtcgtgaactctaccacgggacccggcgagcacctgcgcaatgcc
ctgtggcacaccggcaacacccccggccaggtgcgcaccctgtggcatgaccctcgtcat
ataggctggaaagacttcactgcctacagatggcgtctgagccacaggccaaagacaggt
ttcattagagtggtgatgtatgaagggaagaaaatcatggcagactctggacccatctat
gataaaacctatgctggaggtagactgggattgtttgtcttctctcaagaaatggtgttc
ttctccgacctgaaatacgaatgtagagattcctaa
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integrated database retrieval system
