Cavia porcellus (domestic guinea pig): 100729941
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Entry
100729941 CDS
T07777
Symbol
Nup210l
Name
(RefSeq) nuclear pore membrane glycoprotein 210-like
KO
K14314
nuclear pore complex protein Nup210
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc03013
Nucleocytoplasmic transport
cpoc05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100729941 (Nup210l)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100729941 (Nup210l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpoc03019
]
100729941 (Nup210l)
Messenger RNA biogenesis [BR:
cpoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100729941 (Nup210l)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_NUP210_13th
Ig_NUP210_3rd
Ig_NUP210_15th
Ig_NUP210_2nd
Ig_NUP210_7th
Ig_NUP210_8th
Ig_NUP210_9th
Ig_NUP210_6th
Ig_NUP210_4th
Ig_NUP210_1st
Ig_NUP210_14th
Ig_NUP210_16th
NUP210_Ig
Big_2
T2SS-T3SS_pil_N
Motif
Other DBs
NCBI-GeneID:
100729941
NCBI-ProteinID:
XP_003475417
LinkDB
All DBs
Position
Unknown
AA seq
1784 aa
AA seq
DB search
MASCEALWLQRLRLRFCLPVLGLLLLTPFLLGTQANKLNVPQVLLPFGREPGRVPFLLEA
QRGCYVWHSTHDDVVTVEPLYENGTLCSQRAVLIAESTQPIRLSSVILAREIVTDHELRC
DVKVDVINSIEIISRTRELYVDDSPLELIVRALDTEGNTFSSLAGMMFEWSIAQDDKSAR
EELFSKIRILKYSEAEYSPPGYIVEMEKEEKRGDMILVSGVRTGIAVVKVRIYESFYKKV
ASALIRLLVLENIFLIPSHDIYLLVGTYIKYQAAKMVQGRMTEVKFPLEHYTLELQDHRA
AHKQSLSSKVALLDDKTATVTAFQQGQTNLVFIHKNVHMRSVSVLPNRTIYVVDPGFLGF
TVSPGDRWSLEVERVYAITIEVFDKSSTKIYMSDNLRITYNFLSEYFKEQLTTVNGSYHV
VKVLKAGVVEIDASLTSIVHQVYVLKLNKMELLPFHADVEIGQTIEIPIAMYHVNETKQA
MAFTDCSHLPVDLHMDKQGVFILFEGGIQRPGPMHCSSIHIAARSLGHTLVTVRVSEHEE
HLHSSATFAAYETLKAVNPVEVALVSWHSMKEMVFEGGPRPWILEPSRFFLELSTEKTEK
IEITEVRLPAKRKQNQYIYQVLCLDLGEQVLTFRIGNHPSVLNPSPAVETVQVHFVCAHP
ASLSVTPVYTVPAGAQPCPLSQHGTQMIPVSSLRDTVLELAVFDQHRRKFDNFSSLMLRW
KSSNETLAHLEDFVSMEMVAKDDGSGQARAHGHQILKVHQIKGTVFIGVSFVGYSEKKSP
KDISNVPRSATVELLLVDDVTVLPENATIYNHPDVQEVFSLVEGSGYFAVSSREQGIVTI
TYREAESSVQVVPVQPGSLTLEVYDLCLAFSGPAKAHLRISDIQELELDLIDKVEIGKTV
LVTVRVLNSSKHPFRNKYFRNMELKLQVASAIITLTPTEEQDVYSENYVLQAITIGQTTL
VATTRDKMGRKFTSAPRHIEVFPPFRLVPEKMTLIPANMMQVMCEGGPQPQSIILFSISN
QTVAAVNRRGQVTGRVVGTAVVHGTIQTVNEDTGKVIVFSQDEMQIEVVRLRSVRIVAAT
TRLITAVEMPVYVTGVTSTQSPFSFSNASPGLTFHWSLSKKDVLDLVPRHSEVSLQLPEE
NNFAMVVHTKAAGRTSIRVTVRCVNSSSGQFEGSVLELSDEIQILVFEKLRLFNSEYQPE
KILMPMNSQLKLYTNREGAALVNTRILKCLPNSSVIEEDGTGLLKAGSIAGTAVLEVTSV
EPFGLNQTTITGVQVAPVKYLQVSSQPKLYTASGRTLSAFPVGMVLTFIVHFYNSMGEKF
HTHNTQLYLSLNRDDLLLIGPGSRNYTYTAQAMSRGVTLVGLWDQQHPGMADYIPVAVEY
AIEPDTTLTFVGDVICFSTHLVSQQGEPGIWMISDDNILQTDIVTGVGVARSPGTTVIFH
DIPGVVKTYREVTVKASSRLTFTYDLKTSLTNSPNSTVFKLFITTGRNDVNMKGSCTQNQ
ILAITQVLSPETLVMCHVQFSNTLLNIPASKVFHIRSDFSVEKGVYVCLIKVRPQSEELL
QALSVADTSVYGWATLLSDSTKFGMQRILIPFTPAFYINQSELLLGHKLDTGVIRVQGVD
RVLENLQVLPSTPVLVVSHPRHSPGLATFPVLVANFSAFQQMASPVFINISCALTSQSET
VMVRALRGKSNADKREDSDVFKRLIGSYQMFFTFFVVLASTAFIFLAYNAFLNKIQTVPV
VYVPTVRTPQPGLYTSTNSPSPFCSPQASVPRNQLARWVWSTRN
NT seq
5355 nt
NT seq
+upstream
nt +downstream
nt
atggccagctgtgaggcactgtggcttcaaaggttgaggctacggttctgcttacctgta
ctgggtcttttgttacttacgccgtttttgctgggaacccaggccaacaaacttaacgtg
ccccaggtgttgctacccttcggccgggagccgggtcgtgtgcccttcctgctcgaggcc
cagcggggctgctacgtttggcattccacccatgatgatgtagttactgttgaaccttta
tatgaaaatggcaccttatgttctcaaagagctgtactcattgctgaatctacccagcca
atacgtctcagcagtgttattcttgctcgagaaatagtgactgaccatgaactacgctgt
gatgttaaggttgatgtgataaacagcattgaaattatatctcggacccgggaactctat
gtagatgactcacctctggaactgatagtgagggcattggatactgaaggaaatactttc
agcagtttggcagggatgatgtttgaatggagcattgctcaggatgacaagtcagcaaga
gaagaactgtttagcaaaattaggattctgaaatactctgaagcagaatattctccccca
ggctatatagttgagatggaaaaagaggagaaacgaggagatatgattttggtgtcgggt
gttagaactggtattgctgttgtaaaagttcgaatttatgaatcattctataagaaagtg
gcatcagcactaatacgtctccttgttttagagaatatctttcttataccgtcccatgat
atttatctcttagtaggaacatatattaagtaccaagctgcaaaaatggttcagggaaga
atgacagaggtgaaatttcccctggaacattatacactggaattacaggatcacagagct
gcacataagcaatctctgtctagcaaagtggctttactggatgataaaacagccacagtg
actgccttccaacaaggccaaactaatcttgtctttattcacaaaaatgtccatatgcga
tctgtatctgtactcccaaatcgcaccatatatgttgtagaccccggatttttaggtttc
acagtctcccctggagaccggtggagtctggaggtggaacgggtgtatgccattacaatc
gaggtgtttgataaaagcagcacaaaaatctacatgtcagataatctgagaattacatac
aactttctatcggagtacttcaaagagcagctaactactgtgaatggatcttaccatgta
gtaaaagtgctgaaagctggtgtggtagagatagatgcatccctgacctccattgttcac
caggtgtatgtcctgaagctgaacaaaatggaactgctacccttccatgctgatgtggag
attggccagaccatagaaatccccatcgcaatgtatcatgttaatgagactaagcaggct
atggcattcacagactgctctcatttacctgtggatctccacatggataagcaaggagtc
ttcattctctttgaaggaggtattcaaagacctggaccaatgcactgctccagtatacac
atagcagccagatcgctaggccacactctggtcacggtgagagtgagtgaacatgaggag
cacttgcacagcagtgccacctttgctgcttatgagaccctgaaggctgtaaatcctgtg
gaagtggcgttggtgtcatggcattccatgaaggaaatggtgtttgaaggaggtccgcgt
ccgtggatcttggaaccctcccgattttttctggagctgagcacagagaagacagagaag
attgaaataacagaagtccggctgccagctaagaggaaacagaaccagtacatataccaa
gtcctgtgcctggatttaggggaacaagttcttaccttccgaattggaaatcacccgagt
gttctgaacccaagtccagctgtggaaactgtgcaggtgcatttcgtgtgtgcccatcct
gccagtttgtcagtaacgccagtgtacacagtgccagctggtgcccagccatgtcctctg
tcgcagcatggcacgcaaatgattcctgtatcaagcctgagggacacagtcctggaactt
gcagtatttgatcagcacagaagaaagtttgataacttcagctctctaatgctacgatgg
aaatcttccaatgaaacactagcccatttggaagattttgtatcaatggagatggtagcc
aaagatgatggcagtgggcaggcccgggcacatggtcatcagatccttaaagtacatcag
ataaaagggactgtattcattggagtcagttttgtgggatattcagagaagaaaagccca
aaggacatttccaatgtgcccagatctgcaactgtggagctgctcctggtggatgatgtg
actgtgttgccggagaatgctaccatttacaaccaccctgatgtgcaggaggtattcagc
cttgtggaagggtctggttactttgcagtcagcagccgggagcagggcatcgtcaccatc
acttacagagaagcagagagctcagtgcaggtagttcctgtacagcccggatctctcacc
ttggaagtctatgatctgtgcctggctttctctggtccagcaaaagcccacctgaggata
tcagacatacaagagctggagctcgatctgattgataaggttgagataggcaaaactgtg
ttagtgaccgtgagggttctcaactcttccaaacacccattcagaaataagtacttcaga
aacatggaactcaagctgcaggttgcatcggccattatcaccctgacaccaacagaggag
caggatgtgtactctgaaaactatgttcttcaggccatcacaattgggcaaaccacactc
gtggctaccaccagagacaagatggggagaaaattcacatcagcccctcggcacattgaa
gtgtttcctccattcagacttgttccagagaaaatgacactgattccagctaacatgatg
caggtgatgtgtgaaggtggtccccagccccaatctatcattctcttctccatcagtaat
cagactgtggctgccgttaataggaggggccaagttacagggagagtggttggcacagct
gtggtccacggcaccatccagacagtaaatgaagatactggcaaagtcattgtattttcc
caggatgaaatgcagattgaagttgttcggctaaggtctgttaggattgttgcagctaca
actcgactcatcacagccgttgagatgccagtgtatgtcaccggagtgaccagtacacag
agccctttctccttcagcaatgccagccctgggcttacattccactggtccctgagcaaa
aaggatgtgttggatctagtacctaggcattcagaggtttccctgcagcttccagaagaa
aataactttgccatggttgttcacacaaaagcagctggcaggaccagtatcagagtcact
gtccgctgtgtgaacagttcctctgggcagtttgagggaagtgtattggaactgtctgat
gaaattcagatcctggtgtttgaaaaactccgacttttcaattcagagtaccagcctgag
aagattctaatgccaatgaattctcaactcaaactctacactaacagagagggagcagcc
ttagtgaacactcgaattctcaagtgtcttcctaattcttccgttattgaggaggatggc
acaggactcctgaaagctggctccattgcaggtactgcggtgctggaagtcacttctgta
gaacctttcggactgaaccagacaaccataactggggtccaggtggcccccgtgaagtac
ctgcaggtgagcagccagcccaagctgtacacagcctcaggaaggaccctgtcagccttt
cccgtgggcatggttcttaccttcattgttcacttttacaacagcatgggagagaaattc
catacccacaacactcaactttatctgtctctaaacagagacgacttgctgcttattgga
ccagggagtaggaactatacttacacggcccaggccatgagcagaggagtgacacttgtg
gggctctgggaccagcagcatccgggcatggccgattacatccctgtggctgtggagtat
gccatcgagccagacaccacgctgacctttgttggagatgtcatctgctttagcacgcat
cttgtcagccagcagggtgaacctggaatatggatgatttctgatgacaatattctacag
acagatattgtcactggtgttggagtggccaggagtcccggaaccacagtgatttttcat
gacatcccaggagtagtgaaaacatatcgagaggtgacagtcaaggcatcgtcaagatta
acattcacatatgacctcaagacttctctcaccaatagccccaactcaactgtcttcaaa
ctcttcatcacgactggcagaaatgatgtcaacatgaaaggctcttgtacccaaaatcag
atcttggccattacacaagtcctttctccagagacccttgtgatgtgccatgtacagttc
agtaatactctgctaaacattccagcaagtaaagtcttccacatccgttcagatttcagt
gtggagaaaggggtttatgtttgcctcatcaaggtaagaccgcagtcagaggagttgctc
caagccctcagtgtggccgacacctcggtgtatggatgggccacgctgctcagcgacagc
accaagttcgggatgcagagaatccttattcctttcacccctgcattctacatcaaccag
tcagaactgctccttggccacaaactagacactggtgtgattagagtacagggagtggac
agagttcttgagaacctacaggtcctccctagcaccccagttttggtggtctctcatccc
cggcactcccccggcctggcaaccttccctgtcctggtggccaatttctctgccttccag
cagatggcctctcctgtcttcattaacatctcctgcgcactcactagtcagagtgagact
gtgatggtgagagctttgagaggtaaatctaatgctgataaacgggaagattctgatgtc
ttcaagagactgattggttcttaccagatgttctttactttctttgtggtgttggcatcc
acagctttcatctttctagcatataatgctttcctgaacaagatacagactgttccagtt
gtttatgtaccaactgtaaggacaccacagccaggtctttacacctccacaaactctccc
tctcccttctgcagcccacaagcctcagtaccccggaatcagcttgcacgctgggtatgg
agtacaaggaactaa
DBGET
integrated database retrieval system
