KEGG   Cavia porcellus (domestic guinea pig): 100732041
Entry
100732041         CDS       T07777                                 
Symbol
Smndc1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
cpoc  Cavia porcellus (domestic guinea pig)
Pathway
cpoc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpoc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100732041 (Smndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cpoc03041]
    100732041 (Smndc1)
Spliceosome [BR:cpoc03041]
 Complex A
  U2 snRNP components
   U2 related factors
    100732041 (Smndc1)
 Complex B
    100732041 (Smndc1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    100732041 (Smndc1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR
Other DBs
NCBI-GeneID: 100732041
NCBI-ProteinID: XP_003475234
Ensembl: ENSCPOG00000031666
UniProt: A0A286XKZ1
LinkDB
Position
Unknown
AA seq 238 aa
MSEDLAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIELTKDLLSTQPSETLTS
SDSFASTQPTHSWKVGDKCMAIWSEDGQCYEAEIEEIDEENGTAAITFAGYGNAEVTPLL
NLKPVEEGRKAKEDSGSKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQ
FNNRAYSKNKKGQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcagaggatctagcaaagcaactggcaagttacaaagctcaactgcagcaagtagaa
gctgcattatctggaaatggagaaaatgaagatttgctaaaattgaagaaagatttacaa
gaagttatagaattaaccaaagaccttctgtcaactcaaccttcagaaactcttacaagt
tccgacagttttgcttctactcagcccactcattcatggaaagtaggagacaagtgtatg
gcaatctggagtgaagatggacagtgttacgaagcggagatcgaggagatagatgaggaa
aacggcaccgctgcaatcacctttgctggttatggcaatgctgaagtgactccactgttg
aacctcaagcctgtagaagaaggaaggaaggcaaaggaggacagtggcagcaaacccatg
tcaaaaaaagaaatgattgcccaacagcgtgaatataaaaagaagaaagctttgaaaaaa
gcacaaagaataaaagaacttgagcaagaaagagaagaccagaaggttaaatggcagcaa
ttcaacaacagagcctattctaaaaataaaaaaggccaggtaaagaggagtatttttgct
tcacctgaaagtgtaactggcaaagttggagtaggaacttgtggaattgctgataaacct
atgacacagtatcaagatacttctaaatacaatgtgaggcatttgatgcctcaataa

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