Cavia porcellus (domestic guinea pig): 100733383
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Entry
100733383 CDS
T07777
Symbol
Rapgef6
Name
(RefSeq) LOW QUALITY PROTEIN: rap guanine nucleotide exchange factor 6
KO
K08020
Rap guanine nucleotide exchange factor 6
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc04015
Rap1 signaling pathway
cpoc04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
100733383 (Rapgef6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
100733383 (Rapgef6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
RA
RasGEF_N
PDZ
cNMP_binding
PDZ_6
RA_2
PDZ_2
Motif
Other DBs
NCBI-GeneID:
100733383
NCBI-ProteinID:
XP_013002195
Ensembl:
ENSCPOG00000010242
LinkDB
All DBs
Position
Unknown
AA seq
1564 aa
AA seq
DB search
MEILSNLREHQLRLMSARARYERYSGNQILFCSETIARCWYILLSGSVLVKDSMVLPPCS
FGKQFGGKRGCDCLVLEPSEMIVVENSKDNEDDILQREIPARQSRRRFRKINCKGERQTI
TDDVDINSYLSLPADLTKMHLTDSHHPQVTHVSSSQSGCSIASDSGSSSLSDIYQATESE
VGDVDLTRLPEGPVDSEDEEEEEEEIDRTDPLQGRDLVRECLEKEPADKTDDDIEQLLEF
MHQLPAFANMTMSVRRELCSVMIFEVVEQAGAVILEDGQELDSWYVILNGAVEISHPDGK
VENLFMGNSFGITPTLDKQYMCGIVRTKVDDCQFVCIAQRDYWRILNHVEKNTHKVEEEG
EIVMVHEHRELDRSGTRKGHIVIKATPERLIMHLIEEHSIVDPTYIEDFLLTYRTFLESP
LDVGIKLLEWFKIDNLRDKVTRIVLLWVNNHFNDFEGDPAMTQFLEEFEKNLEDTKMNGH
LRLLNIACAAKAKWRQVVLQKASRESPLHFALAGGSEKGFGIFVEGVEPCSKAADAGLKR
GDQIMEVNGQNFENITFGKALEILRNNTHLALTVKTNIFVFKELLSRTEQEKSGVPHIPK
IAEKKSNRHSIQDVPGDIEQTSQEKGHKKVKANTVSGGRNKIRKILDKTRFSILPPKLFS
DGGLSQSQDDSIVGTRHCRHSLAIMPIPGTLSSSSPDLLQPTTSMLDFSNPSDIPDQVIR
VFKADQQSCYIIISKDTTAKEVVCHAVHEFGLTGASDTYSLCEVSVTPEGVIKQRRLPDQ
FSKLADRIQLNGRYYLKNNMETETLCSDEDAQELLKESQLSMLQLSTIELATQLSMRDFD
LFRNIEPTEYIDDIFKLDSKTGNTHLKEFEDTVNQETFWVASEILTESNQLKRMKIIKHF
IKIALHCRECKNFNSMFAVISGLNLAPVARLRGTWEKLPSKYEKHLQDLQDLFDPSRNMA
KYRNILSSQSMQPPIIPLFPVVKKDMTFLHEGNDSKVDGLVNFEKLRMISKEIRQVVRMT
SANMDPAMMFRQRSLSQGSTNSNMLDVQGGAHKKRARRSSLLNAKKLYEDAQMARKVKQY
LCSLEVETDEEKFQMMSLQWEPAYGTLTKNLNEKKSAKSSEMSPVPMRSVNQTARAHLHQ
PHRASQALQVPAVNLHPVRKKGQARDPALSTSLPQKALGPTEEISGKKHTEDAISVASSL
HSSPPASPQGSPRKGYTLLPSAKSDNLSDSSHSEISSRSSIVSNCSVDSMSVALQDERCS
SQASAVPESTGMLEKTEHLSVGDHGHLGPGWTLSKPSLIKGLAVSSSVSNEEISHEHIVI
EAADSGRGSWTSCSSSSHDNFQSLPNPKSWDFLSAYRHTHLDDPIAEVDSTDGELYSCPK
GCSRTCGQCKGSLETSQLRQSWASSSSLSDTYEPNYGTVKRRVLEATPAELSDGLDPVYK
TVTSSTEKGLIVYCVTSPKKDGRYREPPPTPPGYVGISLADLKEGPHPHLKPPEYSVAVQ
RSKMVHNSLARLPAACLSGSPVACVSSKIVTRPQRHNLQASHPKLADVTDPDSEADENEQ
VSAV
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
atggaaatattatcaaatctcagggaacatcagcttaggttaatgtctgcaagagcacgc
tatgagaggtacagtggcaaccagatcctcttttgctcagaaactattgccagatgttgg
tatatcctgctttctggatctgtacttgtgaaagactccatggtcttacctccttgcagt
tttggtaagcagtttggaggaaaaagaggatgtgattgtcttgtattagagccttcagaa
atgattgtggtggagaattctaaagataatgaagatgatattctacaaagagaaattcct
gccagacaatctcgacgaaggtttcgaaaaattaactgtaaaggagaacgccaaaccata
actgatgatgtggacattaacagctatctttctcttccagctgatcttaccaagatgcat
ctcacagacagccatcatccacaggtgactcacgtgtcttctagtcagtctgggtgtagc
attgccagtgactctggaagcagcagtttatctgatatttatcaggctacagagagtgaa
gtaggagatgtagatttaactcgtcttccagaaggacctgttgattctgaggatgaagaa
gaggaagaggaagaaattgatcgaacagatccattgcagggacgagatcttgttcgagaa
tgtcttgaaaaagaacctgcagacaaaacagatgatgacattgaacagttacttgaattt
atgcaccagctccctgcttttgctaacatgacaatgtcagtcaggagagagctgtgctca
gtgatgatttttgaagtggtggagcaagctggagctgtcatccttgaagatgggcaagag
ctcgactcatggtatgttattttgaatggcgctgtagaaattagtcatcctgatggaaaa
gttgaaaatctctttatgggaaatagttttggaattactcccactctggataaacagtac
atgtgtggaattgttcggactaaagtagatgattgtcagtttgtctgcatagcccagcga
gattattggagaattttaaatcatgtagaaaaaaatacccataaagttgaggaagaggga
gaaattgttatggtacatgaacaccgggaattagaccggagtggaaccaggaaaggacac
attgtaatcaaggcaacacctgagcgtctcatcatgcatttaatagaagaacattctatt
gtggaccccacatatatagaagattttctattaacttacaggacatttcttgaaagtcct
ttggatgttggaatcaagctattggaatggtttaaaattgacaatttaagagataaggtg
acacggattgtattgttgtgggtaaataatcattttaatgatttcgaaggtgatcctgct
atgactcaatttctagaggaatttgaaaaaaatctggaagatacaaaaatgaatggtcat
ctccggctgttgaatattgcctgtgctgcaaaggctaagtggagacaagttgtgctgcag
aaggcttcccgggagtcacccctgcattttgccctcgccggaggaagtgaaaagggattt
ggcatttttgttgaaggagtagaaccttgtagcaaagctgctgatgcaggactgaaacgt
ggtgaccagataatggaagtaaatggacaaaattttgaaaatattacgtttgggaaggct
cttgaaattttgaggaataatactcatcttgcacttactgtgaagaccaacatttttgtt
ttcaaagagttactcagtaggactgaacaagagaaatctggtgttcctcatattcccaaa
attgctgaaaaaaaaagtaatcgtcattcaatccaagatgtaccaggagatattgaacag
acctcgcaggagaaaggacataagaaagttaaagcaaatactgtttcaggtggaagaaac
aaaatcagaaagattttggataaaacacggtttagtatcttacctccaaaactatttagt
gatggaggcctgagccagtcacaggatgacagcattgtgggaacgagacactgtagacac
agcctggctataatgcctattcctgggacactctcatccagcagtcctgatctcctgcag
ccaactaccagcatgttggacttttccaacccttcagatattcctgatcaagtcataaga
gttttcaaagcagatcagcaaagttgctacattatcatcagtaaagatactacagctaaa
gaagtggtttgtcacgctgttcatgaatttggcttgactggtgcatctgacacatactct
ctctgtgaagtctctgttactcccgagggcgtcataaagcagagaagacttccagaccag
ttctccaaattagctgatcgaattcaactcaatggaaggtactatttgaaaaataacatg
gaaacagaaacattatgctcagatgaagatgctcaggagctgcttaaggaaagccagctg
tccatgctacagctcagtaccatcgagctggccacccaattgtcaatgagggactttgat
ttatttcgtaacattgagcctactgagtacattgatgacatttttaagttggactccaaa
acaggaaatactcacttgaaggagtttgaggacactgtaaaccaggagacattctgggtt
gcctcagagattttaacagaatcaaatcagctcaaacgaatgaaaattattaaacatttt
attaagattgcacttcattgtcgagaatgtaaaaatttcaattctatgttcgcagttata
agtggcttgaacctggcacctgtagcacggctcagaggtacctgggaaaagttaccaagc
aaatatgagaaacatctccaagacctgcaagacctttttgatccatctagaaacatggca
aaatatagaaatattcttagtagtcaaagcatgcagcctccaatcattccactcttcccc
gttgtcaagaaagatatgacatttcttcatgaaggaaatgactccaaagtagatggttta
gtaaactttgagaagctaagaatgatttctaaggaaatccgtcaagttgttcgcatgact
tctgctaacatggacccagctatgatgttccgacagaggtcactgagtcaaggcagcaca
aattcaaacatgttggatgttcaaggaggtgctcataagaaaagggcacgtcgcagttct
ctgctcaatgccaagaagctgtatgaggatgcacagatggcgaggaaggtgaagcagtat
ctatgcagtctggaggtagagacggacgaggagaagttccagatgatgtcgctgcagtgg
gagcctgcatatggtaccttgaccaagaatttaaatgagaaaaaatctgccaaatcatct
gaaatgtctccagtgcctatgaggtcagtaaaccagacagcgagagcccacttgcatcag
ccccacagagcaagccaggcgcttcaggtgccagctgttaatctgcaccccgtgaggaag
aagggacaagcaagagaccctgcactgagtacaagtttgcctcagaaagctttaggacca
actgaagaaataagtggtaaaaaacatacagaagatgcgatttctgtggcatcatcttta
cattctagtcctcctgcatctcctcaaggttcccctcgcaaaggttacacacttttacca
tcagctaaatctgacaacttgtccgactccagccatagtgagatttcttctcggtccagc
atcgtgagcaactgttctgttgactccatgtcagtagctctgcaagatgagcgctgttcc
tcccaggcctctgcagtccctgagtccacagggatgctggaaaagacagagcatctctca
gtaggagaccatggacatcttggacctgggtggacactctcaaagccatctctcatcaag
ggtttagctgtctcatcgtctgtgagcaacgaagagatttctcacgagcatattgttata
gaagcagctgacagtggtcgtggaagttggacttcctgttcaagcagctcccatgacaac
ttccaaagccttccaaacccaaaaagctgggactttctgagtgcttacaggcatacccat
ttggatgaccccattgctgaggtggactccactgacggggagctctattcctgtcctaaa
ggctgctctagaacttgcgggcagtgcaaaggaagcttagaaaccagtcagttaagacag
agttgggcctcctccagttctctctctgacacatacgagccaaactatgggacagttaaa
aggagagttttggaagccacccctgccgagttatcagatggcttggacccagtttataaa
acagtcacttcaagtacagaaaagggcttgattgtgtactgtgtcacctcacccaagaag
gatggtaggtatagggagccacctcctactcctccaggatatgtgggaatttccttagcc
gacctaaaggaaggaccccacccgcacctaaaacctccagagtatagtgtggctgtgcag
cggtcaaagatggtgcacaacagcctcgctagactgccagccgcctgtctcagtggcagc
cccgtggcctgtgtctcatcgaagattgtaactcggcctcagaggcataatttgcaggca
tcccatcctaaactagcagatgtgactgatccagatagcgaagcagatgaaaatgaacag
gtgtcagcagtctag
DBGET
integrated database retrieval system
