Chitinophaga pollutisoli: WJU16_09315
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Entry
WJU16_09315 CDS
T10245
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
cpol Chitinophaga pollutisoli
Pathway
cpol01501
beta-Lactam resistance
cpol01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
Chromosome and associated proteins [BR:
cpol03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
WJU16_09315
Transporters [BR:
cpol02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
WJU16_09315
Antimicrobial resistance genes [BR:
cpol01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
WJU16_09315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
She9_MDM33
Motif
Other DBs
NCBI-ProteinID:
WZN43229
LinkDB
All DBs
Position
2295761..2296864
Genome browser
AA seq
367 aa
AA seq
DB search
MQLYRNLYIMLIPLLAAACKGKQARQQMAGGAMPKTTVSVFEVKAASYTVTESFPASLTG
NVQVDIKSDVTGFLQKIHAQDGSNVSKGQALYEVDKSRSQAAYDEANAAVIQAEADLALK
KRDYERYSNLLKKDAISKQTVDQAETAVKTSEAMLAAARATRARTGTDISHAVLRAPIAG
KIGIAQLRIGDLVTAGTTIINTLVNEDPIFADIDIPQTRYNEFRKDVSGRDGGNQYFLTF
PNGELYPEPGKILLVNNAVDPRTGTLRVRLTFPNKKGQLKSGMTATMQMHYKTGEQQVAI
PAKAIMELLSEVKVYTLGPGNVVEVKPVQKGSLLDSLQIINSGLQAGDKVITDGLQKIRP
GDTVNVK
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgcaactttaccggaacctttatatcatgctgatcccactgctggcggcggcttgcaag
ggcaaacaagcccggcagcagatggcggggggcgccatgcccaaaaccaccgtctccgtc
ttcgaagtgaaggccgccagctacaccgtcaccgaaagctttcccgcttcgttaaccggc
aacgtgcaggtcgatatcaaatccgatgtgaccggcttcctccagaaaatccatgcgcag
gacggcagtaacgtttcgaaaggacaggcgctttacgaggtagacaagagccgcagccag
gccgcatacgacgaagccaatgcggcggtaatccaggcggaggcggaccttgcgctgaag
aaacgcgattatgaacggtattccaacctgcttaaaaaagatgcgatttccaaacaaacg
gttgaccaggcggaaacggcggtaaaaacttccgaagccatgctcgccgcagcccgcgcc
acgcgcgcccgtaccggaaccgacatcagccatgccgttttgcgcgcgcccatcgccgga
aagatcggcatcgcgcagctgcgcatcggtgacctggtgacggcaggtaccaccattatc
aacacgctcgtcaacgaagatcccatcttcgccgatatcgacattccccaaacccgttac
aacgaattccgtaaagacgtcagcggccgcgatggcggaaatcaatatttcctcactttc
cccaacggcgaattatatcccgaaccgggaaaaatcctgctggtgaacaacgccgtggat
ccccgtacgggcacgctccgcgtgcggcttacgtttcccaacaaaaaaggccagcttaaa
tcggggatgaccgccacgatgcagatgcattacaaaaccggcgaacagcaggtggccatt
cccgcgaaagctatcatggaactgctgagcgaagtgaaagtctacaccctcggccctgga
aatgtagtggaagtgaaacctgtgcagaaaggttccctgctcgacagcctgcagatcatc
aacagcggcctgcaggccggcgacaaggtgattacggatggcctccagaagatacgcccc
ggcgataccgtcaatgttaaataa
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