Chitinophaga pollutisoli: WJU16_21800
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Entry
WJU16_21800 CDS
T10245
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
cpol Chitinophaga pollutisoli
Pathway
cpol01501
beta-Lactam resistance
cpol01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
cpol00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
WJU16_21800
01503 Cationic antimicrobial peptide (CAMP) resistance
WJU16_21800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpol03036
]
WJU16_21800
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpol02000
]
WJU16_21800
01504 Antimicrobial resistance genes [BR:
cpol01504
]
WJU16_21800
Chromosome and associated proteins [BR:
cpol03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
WJU16_21800
Transporters [BR:
cpol02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
WJU16_21800
Antimicrobial resistance genes [BR:
cpol01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
WJU16_21800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
YknX_C
HH_MFP_RND
RND-MFP_C
Biotin_lipoyl
HH_EMRA
BSH_CusB
Beta-barrel_RND_2
BSH_YknX
HH_CzcB
BSH_CzcB
CzcB_C
HH_AAEA_pHBA
Motif
Other DBs
NCBI-ProteinID:
WZN40601
UniProt:
A0ABZ2YNV1
LinkDB
All DBs
Position
5125148..5126188
Genome browser
AA seq
346 aa
AA seq
DB search
MVVTSAPATTYLEFPASLEGKVNVDVRPQVSGYLEKIFVDEGAYVKAGQPLFKIDPKVYA
EQLNSASSNQLAAQANVEKAQVEVDRLTPLVASNVISEVQLKTAKANYEAAKAALAQARA
AAGSARINVGYTLITASVSGYIGRIPYKVGALVSNADAQPLTVLSEVREMYAYFSMSEAD
FITFKNNFPGKTLEEKLKNAPPVELILADNSTFTEKGKIGTIDGQFNKTTGAITFRATFP
NPDGVLRTGNTGKVRFAQEVPAAITIPQEATFEIQDKVLVYTVADSNKVASRPIRIFGKT
ANFYYVSDGLKAGDKIVLSGTGNLKDGAVIAPQPVPADSVLQSKTL
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggtggttacttcggccccggctaccacttacctggagtttcccgcttcgctggaagga
aaggtgaatgtagacgtgcgcccgcaggtatccggctacctcgaaaaaatatttgtagat
gaaggcgcttatgtaaaagcagggcagccattgtttaaaatagatccgaaggtatatgcc
gaacaattgaacagcgcctcttctaaccagcttgcagcgcaggctaacgttgaaaaggcg
caggttgaagtggaccgcctgacccctctggtggccagcaacgtgatctctgaggtacag
ctaaaaacggcgaaagcaaactatgaggcagcaaaagccgctttggcccaggccagggca
gcagcaggcagcgcgcggatcaatgtaggctataccctgattaccgcgtcggtaagcggt
tacatcggaaggatcccctataaggtgggcgccctcgtaagcaacgccgatgcccagccc
cttacggtgctttccgaagtacgtgaaatgtacgcttacttttcaatgagcgaagcggac
ttcatcacattcaagaacaacttccccggcaaaacgctggaagagaaactgaagaatgca
cctccggttgaactgatactggcagataacagcacgttcactgagaaaggaaaaatagga
acgatagacgggcagttcaataagaccaccggcgccatcacattccgcgccactttcccc
aaccccgatggcgtactgcgtacgggcaatacgggcaaagtaagatttgcacaggaagtt
cccgctgctatcaccattccgcaggaagctacgttcgagatccaggacaaagtgctggta
tacaccgtggcagacagcaacaaagtggccagcaggcccatcaggattttcggaaagact
gccaacttttattatgtaagcgacgggttgaaagcaggcgataagatcgtgctgtccgga
accggcaatttaaaagacggggcagtcatcgcaccgcagccggtaccggcagacagtgtg
cttcaatcaaaaacattgtaa
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