Crocodylus porosus (Australian saltwater crocodile): 109306521
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Entry
109306521 CDS
T07440
Symbol
RB1
Name
(RefSeq) retinoblastoma-associated protein isoform X1
KO
K06618
retinoblastoma-associated protein
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo04110
Cell cycle
cpoo04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
109306521 (RB1)
04218 Cellular senescence
109306521 (RB1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cpoo01009
]
109306521 (RB1)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpoo03000
]
109306521 (RB1)
Protein phosphatases and associated proteins [BR:
cpoo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109306521 (RB1)
Transcription factors [BR:
cpoo03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
109306521 (RB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rb_C
RB_A
RB_B
DUF3452
DUF5548
Motif
Other DBs
NCBI-GeneID:
109306521
NCBI-ProteinID:
XP_019385483
Ensembl:
ENSCPRG00005002044
UniProt:
A0A7M4E164
LinkDB
All DBs
Position
Unknown
AA seq
927 aa
AA seq
DB search
MAPRPPRRGAAVALRGQRASPDRGAAPSEPSPAAPRLEFGEADFVALCDILKVSDVIRTS
AWKTYEKVSSVVGSLEAYIKKKEEIWGICIFIVAVDLDEITTFTFTELLKSIGLSACTFF
QLLKQMDSNMDTISTNVDSTVSRLQKKYEVLLALYRKFERICGLIYVAQPNNQISDELNS
MLVQKISWITFLLAKGKVLQMEDDLVISFQLLLCVLDYFIKLAPPALLKEPYKSAVNTVS
INGSTRTPRRGQNRSTRTSKQTETDSKVIEVLCKEHDCNLDEVKNVYFTSFIPFLNSVGI
VASNGLPEVETLSRQYEDVYLKNKDIDARLFLDHDETLQPDRIDGCLQLERTPRKSNPDE
EFNLILPQTPVRAAMNTIQQLMMILNSATDKPSETLISYFNNCTVNPEEGIRKRVEDLGH
IFKEQFAKAVGQGCAEIGSQRYKLGVRLYYRVMESMLKSEEERLSVHNFSKLLNNNDFHT
SLLACAVEVVMATYGRNASQSDGTSAETDLSFPWILNVFDLKAFDFYKVIESFIKAEPSL
TREMIKHLERCEHRIMESLAWQSDSPLFDLIRQSKEREGQVDQPEPTCTLNLPLQHNHTA
ADLYLSPVRSPKKKGSAVHLNCTPPTDAQSAVTPQTQKPQKSTSLSLFYKKVYRLAYLRL
NTLCFRLLSEHPELEHLIWTLFQHTLQNEYELMRDRHLDQIMMCSMYGICKVKNIDLRFK
IIVSAYKELTNTSQETFKRVLIREGQYDSIIVFYNLVFMQKLKTNILQYASNRPPTLSPI
PHIPRSPYTFSNSPLRVPAGNNIYISPLKSPYKPSEGLLSPAKTTPGSRILVSIGETFGT
SEKFQKINQMVGNSDRQLKRSAEVSSAPKPLKRLRFDTEGQDEADGSKHLPGESKFQQKL
AEMTSTRTRMQKQKLNDGTDTSASEEK
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccaggcccccgcgcaggggtgccgccgtcgccctcagggggcaacgcgctagc
ccggaccgcggcgcggccccctccgagccctcgcccgctgcccccaggcttgagtttgga
gaagcagattttgttgcactttgtgacattttaaaagtttcagatgtcataagaacaagt
gcatggaagacgtatgaaaaagtgtcatctgtggttggatctctagaggcctacatcaaa
aagaaggaggagatatggggaatctgtatctttattgtagcagttgacctggatgagata
acaacattcacttttacagagcttctgaaaagtataggtctaagtgcatgtacatttttt
cagttgttgaagcaaatggatagtaacatggataccataagcacgaatgttgatagtact
gtatcgcgactacagaagaaatatgaagtattacttgcgctatatcgcaagtttgaaagg
atttgtggacttatttatgtggcacagcctaataatcaaatttctgatgaactcaattcc
atgttagttcaaaagatttcttggatcacttttttgctggctaaaggaaaagtgttacag
atggaagatgacctggtgatctctttccagttattgctgtgtgttcttgattattttatc
aaacttgcaccaccagcattgctcaaggaaccatacaaatctgctgtgaatacagtatct
attaatggctcaactcgaactccaaggcgaggtcagaacaggagcacacgtacatcaaag
caaactgagacagactcgaaagttattgaagtcctttgtaaggaacacgattgtaattta
gatgaggtcaaaaatgtgtatttcacaagcttcattccattcttgaattctgttggtatt
gtagcttcaaatggactcccagaggttgagactctctcaaggcaatatgaagatgtttac
ctgaaaaacaaagacatagatgcgagattgtttctggaccatgatgaaactctacagcct
gatcgcatagatggatgcttacagttggagagaacaccaaggaaaagtaacccagatgaa
gaattcaatctcatacttccacagactccagttcgtgctgcaatgaacactatacagcag
ttaatgatgatcttaaattcagcaactgataaaccgtcagagactctcatttcgtatttc
aataactgtacagtgaaccctgaggaaggcatcaggaaaagggtagaagatcttgggcac
atcttcaaggagcaatttgctaaagctgttggacagggttgtgctgaaatcggctcacag
agatacaagcttggtgtacggctatattatagagtaatggaatccatgttaaaatcagaa
gaagaacgtctgtcagtgcacaattttagcaaacttttgaacaataacgacttccacaca
tctcttctggcttgtgctgttgaagttgtcatggctacatatggcaggaatgcttcacaa
agcgatggtaccagtgctgaaacagatctctctttcccatggatactcaatgtatttgat
ttaaaagccttcgacttctataaggtgattgaaagctttattaaagcagaaccaagcttg
acaagagagatgataaaacatctagaacgctgcgaacatcgaattatggaatctcttgca
tggcaatcggattcacctttatttgatcttatcaggcagtcaaaggaaagagaaggtcag
gttgatcagcctgaacccacttgcactctaaacctgcctctccagcataatcacactgct
gcagacctgtatctttctcctgtgaggtcgcctaagaaaaagggatctgcagttcactta
aactgtactcctcctacagatgctcagtctgctgtgaccccccagactcagaaaccacag
aaatctacctccctctccctgttttacaaaaaagtatatcggctggcatatcttcgattg
aataccctctgctttcggcttctctctgaacaccctgaactggaacacttgatctggacc
ctttttcagcacacgttgcaaaatgaatacgaacttatgagagacaggcacttagaccag
atcatgatgtgttctatgtatggcatatgcaaagtcaagaacatagatctcagatttaaa
atcattgtttcagcatacaaggagctcaccaataccagtcaagagactttcaagcgtgtt
ctgatcagggaaggacaatatgactccattatagtcttctacaatttagtgtttatgcag
aaattgaaaacaaatatattgcagtatgcctccaataggcctcctaccttatcccctatc
ccacatattcctcgaagcccttacacgttttctaattcccccctccgagtccctgctgga
aataacatctacatctcacccttgaagagtccctacaaaccctctgaggggctgctgtca
cccgcaaaaacgacaccaggatccagaatcttggtgtcaattggtgaaacgtttgggact
tcagagaagtttcaaaaaataaaccagatggtgggtaacagtgaccgtcagctgaaacgc
agtgcagaagtaagcagtgctccaaagccactgaaaagacttcgctttgacacagaggga
caagatgaagcagatggaagcaaacatctaccaggagagtccaagttccaacaaaagctt
gcagaaatgacatctactcgaacgagaatgcaaaagcaaaaactgaacgatggaactgat
acctcagccagtgaagaaaagtga
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