Crocodylus porosus (Australian saltwater crocodile): 109309841
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Entry
109309841 CDS
T07440
Name
(RefSeq) protocadherin gamma-C3-like
KO
K16497
protocadherin gamma subfamily C
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpoo04515
]
109309841
Cell adhesion molecules [BR:
cpoo04515
]
Cadherins
Protocadherins
109309841
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
RET_CLD1
DUF6773
Motif
Other DBs
NCBI-GeneID:
109309841
NCBI-ProteinID:
XP_019390255
LinkDB
All DBs
Position
Unknown
AA seq
853 aa
AA seq
DB search
MEIRHREPDRDPKRQILSVILLLSLLCGAVSAQIHYSIPEEMPKGSLVGNLATDLGLSVR
ELPHRRLRVSAREYFGTDLETGLLFVKERIDREELCGALSPCTLSFEVVVENPLELFSGA
VEIQDINDNDPAFPSSQMRLEISESVAPGARFPLESAQDPDVGINSLQTYWLSANQHFVL
NVQTRGDGSKYAELVLEKELDREEQKKLQLVLTALDGGSPPRSASVNIQIDVLDANDNAP
VFNQSTYKASVRENTPRDTLVVQTNAYDLDEGPNGDIVFSFSSHTPAKVRELFALDSATG
EVRVKGELDYEEVKFYEIYIQAKDKGPYPEVAHCKLLVEVIDVNDNAPQIQVTSVYSPVP
EDAVPGTVIALLSVTDPDSGDNGLVNCFLSHGIAFTLSSSLKNYYTLKTKAALDREQESE
YNITVIAKDSGSPSLSAEKQILVEVSDVNDNAPSSSQLSYDVYVAENNPPGVPVFNVSAS
DPDLHQNSRLSYSILENGPSSHPLGRYFSINRENGTIYLLVSLDHEDLPEFRMTVRVQDG
GTPALATNLTIHVFVTDQNDNAPTVLYPRPNGASSYPEMISPAVSAGHMVTKVIAWDADA
GYNAWLSYILLSATDASLFSVELRSGEIRTARQPRKDDAPMQTLVILVKDNGEPALSSSM
TVTVTVMERAKEALRDATKLATTRDKKNHLTFYLTLAVILVSVTFFVTVIAAGIYKFYKW
RQSRDICGSSRSSLYRTPGPFNHVDAVRSGFTPPSFYQQTYLTTNSHHSDFLGKKPLTSS
PLGSCQNTLNCCEPGLYHQVLGAQGRLSAPCQEFGEYAKVQVSDISSLPVRELQVTGVAN
RQHSRIDLASTSK
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcagacacagagagccggaccgggatcccaagcggcaaatactctccgttatt
ttattgctgtccctgctctgcggggcggtctcggcgcagattcactactcgatccccgag
gaaatgcccaaagggtccctcgtgggcaatctcgccacggatctggggctgagtgtacga
gaactgccccatcgcaggctccgggttagcgcgcgcgagtactttgggacagatctggag
accgggctgctgtttgtgaaggagcggatagaccgagaggagctctgcggggctctctct
ccatgcaccttgagctttgaggttgtggtggagaacccgctggagttgttcagcggcgct
gtggagatccaggacatcaatgacaacgacccagctttccccagcagccagatgagactg
gaaatcagtgagtcggtggcgcctggagcgcgcttcccgctagagagcgcgcaggaccct
gacgtggggattaactctttgcagacttattggctcagcgccaaccagcattttgtgctc
aacgtgcagacacgaggggatggtagcaaatatgcagaactggtgctggagaaggagtta
gacagggaggagcaaaagaagctgcagctggtccttacagccctggatgggggcagcccg
cccagatccgccagtgtgaacatacagattgatgtcctggacgccaacgataatgctccg
gtctttaaccagtccacctacaaagcgagtgtaagggaaaacacccccagggacactctg
gttgtccaaaccaacgcttatgacttggatgaggggcccaatggggacatcgttttctct
ttcagtagtcacacgcctgccaaggtgcgagaactctttgcgttggactctgctactgga
gaagtgagagtcaaaggggagctggattacgaggaagtgaaattctatgagatttatata
caagctaaagataagggtccttatccggaagtagctcattgcaaactgttggtggaagtc
attgatgtaaatgacaatgctccgcagatccaagtgacctccgtgtacagccctgtgccc
gaagacgcagttcccgggacagtgatagctttgttgagcgtaactgacccggactccgga
gacaacgggctggtaaactgcttcctctcccatggaatcgccttcacgctcagttcctcc
cttaaaaattactatacgttgaaaaccaaagcagccttggaccgggagcaggagtctgag
tataatatcaccgtcatagccaaggactcgggctcgccctccctgtctgcggagaaacag
atattggtggaagtatcagatgtcaatgacaacgcgcccagctcttcccaactctcgtac
gatgtttatgtggcagaaaacaacccccctggtgttccagtatttaacgtcagtgcctca
gacccggacctacaccaaaactcccgtctctcctactctatcctggagaacggcccctcg
agccaccccctgggcaggtatttttctattaatcgagagaatggcaccatctacctcctt
gtttccctggaccacgaggacctgcccgagttcagaatgacggtgcgtgtccaagatgga
ggcaccccggcccttgccaccaacctcacaatccatgtgttcgtcaccgaccagaacgac
aacgcgcccacggtcctgtacccgcggccaaacggcgcgtcttcctacccggagatgatc
tcgcctgcagtcagcgccggtcacatggtcaccaaggtcatagcctgggatgcggatgcg
ggatacaatgcttggctctcttacatcctcctttcggccaccgacgccagcctcttctcg
gtggagctgcgcagcggggagatccgcactgcccgccagccgcggaaggacgacgctcct
atgcaaaccttggtcatcttagtaaaagacaacggggagcccgctctgtcttccagcatg
accgtcaccgtgactgtgatggaaagggcaaaggaggccctgcgggacgccaccaaactg
gccacgacgcgtgacaaaaagaaccatttgaccttctatctaaccctggctgtgatcttg
gtctccgtgaccttctttgtcaccgtgatagcagcgggcatctataagttttacaaatgg
aggcaatccagggacatttgcggcagctccaggagctctctgtacagaacaccggggcct
ttcaaccacgtggatgctgtccggagcgggttcacgcccccgagtttttaccagcagacg
tatctcaccacgaactcccaccacagcgactttctggggaaaaagcccttgacctccagc
ccccttgggagctgccagaacacactgaactgctgcgagccgggactgtaccaccaggtg
ttaggcgcacagggcaggctttctgcaccctgccaggaattcggagaatatgccaaagtt
caggtatcggatatcagttccttgccagttcgggagctgcaggtgacaggtgtggctaac
cggcagcattcccgaatagatctggcttctacttctaaatga
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