Crocodylus porosus (Australian saltwater crocodile): 109309915
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Entry
109309915 CDS
T07440
Name
(RefSeq) protocadherin gamma-C5-like isoform X1
KO
K16497
protocadherin gamma subfamily C
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpoo04515
]
109309915
Cell adhesion molecules [BR:
cpoo04515
]
Cadherins
Protocadherins
109309915
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_tail
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
109309915
NCBI-ProteinID:
XP_019390347
LinkDB
All DBs
Position
Unknown
AA seq
929 aa
AA seq
DB search
MHWRRSLQWQLLLLGAAFSLADPAAAQTRYSVPEDREPGSFVGDLAKELGVDVRSLAARN
LRLVSEGGREYFQVNLASGVLLVNEKLDREALCGLSATCSLHLQLVLENPLQLHRVEVDI
LDVNDNAPKFPKQEVSLEISEVASPGTRLPLEVAEDPDMGSNSISTYQLSPSDYFALSIS
VRGDGVKMPEIVLERSLDREKVAAHHLTLTALDGGNPVRSGTAQITIQVLDANDHSPVCE
PPISTIYLEENLPVGTLVTKVNVTDLDEGPNGEVEYSFKASNNAPDKLPRQFSLDPLTGE
IRTKALLDFEESSAYEITVRARDKGSPAMEGHCNLRVELVDVNDNSPEIVLTSVSSPVQE
NAPHGTVIALIAAKDSDSGENGQVHLHITKDLPFKLVTSFKGHYSVVTDGPLDREKAAGY
NITVRATDSGSPQRSTQKTIFLQIADVNDNAPRFSSPSYTAHVQENTLPGTSIFSVSASD
PDVGVSSKLSYSIVDHGGQDLPLSTFFHINQENGTIYTLQALDYEQEKVFQVPVEVKDAG
SPPLSSTAIVHLFVLDQNDNAPTIIYPSVPEGSAFQQAVPASAEPGYLVTKIVAVDADSG
HNAWLSYLLQESSEPCPFSVEHHSGEIRITQSLRELGLSHRLVVLVQDNGTPSLSASVTL
LIPLEENSLQDFAKSMELPKSPSRASSLTLYLIISLVAISLVVCAMLAILGAKCLKASPG
AVGWPSIFCCRRAGHEPTTYFRGQLKPGLGGTGLVSQAQCYKSCLSPMSDQGDFLFIKPF
SHSSTGESMAAFEQVGSTLASPCDGQAQPNTDWRFSQAQRPGTSGSQNGEEGGAWPNNQF
DTEMLQAMIMASANEAADGNSTLGGGTGTMGLSARYGPQFTLQHVPDYRQNVYIPGSTAT
LSNSSGKRDAKSSGSSGGNKKKSGKKEKK
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgcactggagacggagtttgcaatggcagctcctgctcctcggcgccgccttctccctg
gcggatccggccgctgcacagactcgatactccgtgcccgaggaccgcgagccgggctct
tttgtgggggacttggcgaaggagctgggggtggacgtgcggagcctggctgcccgcaac
ctgcgcctggtcagcgaaggcgggcgcgagtatttccaggtgaacctggccagcggagtc
ttacttgtgaatgagaaactagaccgggaggcgctgtgcgggctgagcgccacgtgctcc
ctgcacctccagctggtgctggagaaccccctgcagctgcaccgcgtggaggtggacatc
ctggatgtcaacgacaacgcccccaagttcccgaagcaggaagtctccttggagatcagc
gaagtcgctagtcctgggactcggctgcccctcgaggtagcagaagacccggatatgggc
tccaactccatctccacctaccagctcagtcccagtgattactttgccctgagcataagc
gtgaggggggatggtgttaaaatgcctgagatagtgcttgagagatccctggatagagag
aaggtggctgcccatcatctgaccctcactgctctggatggtgggaatccagttaggtca
ggcactgcccagatcacgattcaagtcctggatgccaatgaccactctcctgtgtgtgaa
cctcccatttccaccatttatctggaagaaaatctaccagtgggcaccttggttacaaag
gtgaatgtcacagatttggatgaaggccccaatggggaggttgaatattctttcaaagcc
agcaataacgctccagataagcttcccaggcaatttagcttagaccctctcacaggggag
atcagaaccaaagcccttttggattttgaggaatccagtgcttatgagatcacagttcga
gccagagataagggatccccagcaatggagggtcattgcaacctgagagtggagctggtt
gatgtcaatgacaacagcccagagattgtgctcacctctgtgtccagcccagtacaagaa
aatgcaccccatggcactgtgattgcactcattgctgccaaggacagtgactctggggaa
aatggacaagtccatctgcacataactaaagaccttccatttaagttggtgacttccttc
aaagggcattactccgtggttacagatgggcctttggaccgggaaaaagctgctggctac
aacatcacagtgagagccacagactctgggtcccctcagcgctccacacagaaaaccatc
ttccttcagattgctgatgtgaatgacaatgcaccaaggttttccagcccttcctataca
gctcatgtgcaggaaaacacacttcctgggacatccatcttctctgtatcagcctctgac
cctgatgtaggtgtcagctccaagctgtcatactccattgtggatcatggaggccaggat
ttacctttatcaaccttttttcacatcaaccaggaaaatggcaccatctatactttgcaa
gctttagactatgaacaggagaaagtgttccaggtgcctgtggaggtgaaggatgctggg
tctccacctctgagcagcacggccatagtccacttgtttgttttggatcagaatgacaat
gctcccaccattatctatccctcagttccggagggctctgccttccagcaggctgtcccg
gcctctgcagaacctggctacctggtaaccaaaattgtggctgttgatgctgacagtggt
cacaatgcttggctgtcttacttgcttcaggagagcagtgagccatgtcctttcagtgta
gagcaccactcaggggagatacgaataactcagtccctcagggaattgggcctgtcccac
aggctggtggtcctggtgcaagataatgggactccctctctgtcagcttcagttactctc
ctcattcccttggaagagaacagcctgcaagactttgccaagtccatggaacttcctaaa
tcaccatccagagcttccagtttaaccctctatctcataatttctttggtagccatctct
ctggtagtgtgtgcaatgctagccattttgggtgctaagtgcctcaaagctagccctgga
gctgtgggctggcctagcatattctgttgcaggagggctggccatgagcccaccacatat
tttcgtgggcagctgaaaccaggccttggaggaactggcctggtttcccaggcacaatgc
tacaaatcttgtttatctccaatgtctgatcaaggtgacttcctcttcataaaacctttc
agccattcttctactggagaaagcatggctgcctttgagcaggtgggcagcaccttagcc
agtccttgtgatgggcaagcacagcctaatactgactggcgcttctctcaggcccagaga
cctggaactagtggctcacagaatggagaagaaggtggagcttggccaaacaaccagttt
gatactgaaatgcttcaagccatgatcatggcatcagcaaatgaagctgctgatgggaac
tccactcttggtgggggaactggcactatgggcctcagtgcaaggtatggcccccagttc
acactgcagcatgtcccagactacagacagaatgtgtacatccctggcagcactgccact
ctctccaactcctcaggtaaacgagatgcaaagagctcgggatcttcaggaggaaacaag
aagaagtcagggaagaaggaaaaaaagtaa
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