Crocodylus porosus (Australian saltwater crocodile): 109310082
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Entry
109310082 CDS
T07440
Symbol
RAPGEF6
Name
(RefSeq) rap guanine nucleotide exchange factor 6 isoform X1
KO
K08020
Rap guanine nucleotide exchange factor 6
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo04517
IgSF CAM signaling
cpoo04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
109310082 (RAPGEF6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
109310082 (RAPGEF6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
RA
PDZ
cNMP_binding
PDZ_6
RA_2
PDZ_2
Motif
Other DBs
NCBI-GeneID:
109310082
NCBI-ProteinID:
XP_019390600
Ensembl:
ENSCPRG00005010295
UniProt:
A0A7M4FXM8
LinkDB
All DBs
Position
Unknown
AA seq
1660 aa
AA seq
DB search
MGSAVDPKVQQALRKKSPERSREDLNIIYTYLHGMDILSHLREHQLRIMSSSARYERYKG
NQVLFCSETIARCWYILLSGSVLMKDSMFLPPCSFGKQSGGKRGCECIVLEPSEMIVVEN
SKDNEENILQREVPIRQSRRRFRKINQRGERQTITDHVDASSYLSLPADLTKMQITDNPH
PQVTHVPSSQSGCSIASDSGSSSLSDIYQATESEMGDVDLTGLPEAPVDSEDEEEEEDED
IDRTSDPLLGRDVVRECLEKEPADKTDDDIEQLLEFMHQLPAFANMTMSVRRELCSVMIF
EVVEQAGAIILEDGQELDSWYVILNGTVEISYPDGKTENLCMGNSFGITPSLEKQYMNGV
VRTKVDDCQFVCIAQQDYWRILNHVEKNTHKVEEEGEIVMVKEHRELDRSGTRKGHIVIK
ATPERLITHLIEEHSIVDPTYIEDFLLTYRTFLSTPLEVGDKLLEWFEVDSLRDKVTRVV
LLWVNNHFNDFEGDPAMTRFLEEFEKNLENTKMKGHLRLLNIACAAKAKWRQITLQKASR
DSPLFFSLLGGSEKGFGIFVETVETGSKAAEVGLKRGDQIMEVNGQNFENITFVKALEIL
RNNTHLSITVKTNIFVFKELLSRIGQEKNGVPHIPKIAEKKNNRYSIPDMPGDMEQIFPR
EKGNKKLKANTVSGGRNRIKKILDKTRFSILPPKLFSDGSVSQSQDDSIVGTRQCRHSLA
IMPIPGTLSSSSPDLLQPTTSILDFSNPSAVGFYYIPDQVIRVFKADQQSCYIIISKDTT
AKEVVSHAVHEFNLTGASETYSLCEVSVSPEGVIKQRRLPDQFSKLADRIQLNGRYYLKN
NMETETLCSDEDAQELLRESQISLLQLSTIEVATQLSMRDFELFRNIEPTEYIDDLFKLD
SKTGNAHLKQFEDVINQETFWVATEILTEPNQLKRMKIIKHFIKIALHCRECKNFNSMFA
VISGLNLASVARLRGTWEKLPSKYEKHFRDLQDLFDPSRNMAKYRNILSSQSMQPPIIPL
FPVVKKDITFLHEGNDSKVDGLVNFEKLRMIAKEIRQVIRMTSANMDPAVMFRQRKKRWR
SLGSLSQGSTNSNMLDVQGGAHKKRARRSSLLNAKKLYEDAQMARKVKQYLSNLNVETDE
EKFQIMSLQCEPAYSTLTKNLNERRGGKSSEMSPIPLRSVGQTTKVQQHQQNRMSQVLQV
PAVNLYPNRKKGSAKDHVTFNTGSPQKSLSLSEEVSKKQAEDAVSMASSLHSSPLASPQG
SPRKVGNIQRSDNCSQMNLSGSSSSLASETSNKNSGQRSYGIGYALIPSAKSDNFSDSSH
SEISSRSSIVSNCSVDSMSAALQDERGLPQSLSVVDSVGTERKEHPPPSAEYSQPCPGWP
LPRPAIIRGLAVTSSMSNEEISHEHITIEAADSGRGSWTSCSSSSHDNFQNIQIQKSWDL
LNSYRHAHLDGPIAEVEPTNCYPEEAYLYSEAFSKNNRQSKTSMELDQSRQSWASSSSLS
DTYETNYGTIKRRGLENSTMEQTEILDSKPGTDATYKTVTSSTEKGLIVYCVTSPKKDDR
YREPPPTPPGYMGISLADIKEGSPHHPHLKPPDYSVAVQRSKMLHSDLSRLSSASLSSEP
VACISSKMPQWHTRQPSHPKLTDMTDADSEEDEDEQVSAV
NT seq
4983 nt
NT seq
+upstream
nt +downstream
nt
atgggctccgccgtggaccccaaggtccaacaggccctgcggaagaagtccccggagcgg
agccgcgaggacttaaatattatctatacttatcttcatggaatggacatattgtcacat
ctcagggaacatcagctaagaataatgtcttcaagtgcccgctatgaaagatacaaggga
aaccaagttctcttttgctcagaaacaatcgccagatgttggtacattcttctttccgga
tctgtgcttatgaaagactccatgtttttaccaccatgcagttttggcaagcagtctgga
ggcaagagaggatgcgagtgtattgtactggaaccttctgaaatgattgtggtggagaac
tccaaagacaatgaagaaaatatcttgcaaagagaagttcccatcagacagtctcggcga
aggttcaggaagattaatcaacggggagaacgccagaccatcactgaccatgtggatgct
agcagttatctttcgcttccagcagatcttaccaagatgcagattacagacaatccacat
ccacaggtgactcatgtcccttccagccagtctggatgtagcattgccagtgactctggg
agcagcagcttgtctgatatatatcaggctacagaaagtgagatgggagatgtagattta
acaggactcccagaagcacctgtggactctgaagatgaagaggaggaggaagatgaagat
attgacagaacttcagatccattattaggacgggacgttgtacgagagtgccttgaaaaa
gaacctgcagataaaacggatgacgacattgagcaattactggaatttatgcatcagctc
ccagcttttgcaaacatgaccatgtctgtgagaagagagctttgttcagttatgatattt
gaagtggtagaacaagcgggagccatcatacttgaagacggacaagaacttgattcttgg
tatgtcattttaaatggcactgtggagatcagctatccagatgggaaaactgaaaatctc
tgtatgggaaatagttttgggattactccttctctggaaaagcagtatatgaatggagtg
gttagaaccaaagtagatgactgtcagtttgtatgcatagcccagcaagattactggcgc
attctgaaccatgtggaaaaaaacactcataaagttgaggaagaaggagaaattgttatg
gtaaaggagcacagagagctggatcgcagtggaaccaggaaaggacacatagttattaag
gcaacacctgagcgactcatcacacatttaatagaagagcattccatcgttgatccaaca
tacatagaagacttccttttaacatacagaacatttctctcaacccccttggaagttggg
gataagctcttggagtggtttgaagtagatagcctcagggataaggttaccagagtggtc
ttattgtgggtaaacaatcattttaatgattttgaaggagatccggctatgacacgtttt
ctggaagaatttgaaaaaaacttggaaaatacgaaaatgaaggggcacctcaggttgctg
aatattgcttgtgctgccaaggcaaaatggaggcaaattaccctgcagaaggcttccaga
gactcgcctctgtttttcagcctcctgggaggaagtgagaagggttttggtatatttgta
gagactgtagaaacaggcagcaaagcagcagaagttgggctgaagcgtggcgatcagata
atggaagtaaatgggcagaactttgagaacattacatttgtgaaagcccttgaaatcttg
aggaacaatactcatctttccattacagtaaagacaaacatttttgtatttaaggagctg
cttagccggataggccaggagaaaaacggagtcccacatattccaaaaattgcagaaaag
aaaaataaccgttactccatcccagatatgccaggagacatggaacagatatttccacgt
gagaaaggaaacaaaaaactgaaagcaaacactgtatccggtggaagaaataggatcaag
aaaattttagacaagactcgtttcagtattttgcccccaaaactatttagtgatggcagt
gtaagtcaatcccaggatgacagcattgttggaacaaggcagtgcagacacagcctggcc
atcatgcctatccctggaacactttcatccagcagcccggacctgttgcaacctacaacc
agcattcttgatttttctaatccttcagctgttggtttttactatattccagatcaagtt
attagagttttcaaagcagatcaacagagttgttacattatcatcagcaaagacactacg
gcaaaagaagttgtgagtcatgctgtgcatgaattcaacttgacaggtgcatcagagacc
tactctctctgtgaggtgtctgttagtcctgagggagtcatcaaacaaagaaggcttcca
gatcagttctcaaaattagcagacaggattcagctcaatggaaggtattatctgaaaaac
aatatggaaacagagaccttatgctcagatgaagatgcccaagaactgctcagagagagt
caaatatctcttcttcagctgagcaccattgaagtggcaactcagctttcaatgagagac
ttcgaattatttcgcaacattgagcctactgaatacattgatgacctttttaagctggac
tcgaaaacaggaaatgctcacctgaaacaatttgaggatgtcattaaccaagagacattt
tgggttgccacagaaattttaacagagcccaaccagctcaaaagaatgaaaattattaaa
catttcattaaaattgccctccactgtcgagaatgcaaaaacttcaattccatgtttgca
gttataagtgggctaaatctggcatcggttgcacgactcagaggtacctgggaaaaatta
ccaagcaagtatgaaaagcatttcagagaccttcaggatctttttgatccatctagaaac
atggcaaaataccgcaacattcttagcagtcagagcatgcagcctccaattattccactc
ttccctgttgtcaagaaagatattacatttctacatgaaggaaatgattccaaagtggac
ggcctggtaaattttgagaaactcagaatgattgccaaagaaatccgacaagttatcaga
atgacctctgctaacatggatccagctgtaatgttcaggcaaaggaagaagaggtggagg
agtttggggtctctgagccagggcagcacaaactccaatatgctcgatgttcaaggaggt
gctcacaaaaaacgtgcccgacgcagttcactccttaatgccaagaagctatatgaggat
gcccagatggccagaaaggtgaagcagtacttgtccaacctgaatgtagaaaccgatgag
gaaaaattccagatcatgtcacttcagtgcgagcctgcatatagcacattgacaaagaat
ttaaatgagagaagaggtgggaaatcctcagaaatgtctccaatacccttgaggtcagtt
ggccaaaccacaaaagttcagcagcatcagcaaaacagaatgagccaagttcttcaagtt
cctgctgttaatttgtatcccaatagaaaaaagggatcagcaaaggaccatgtcacgttt
aatacaggttctcctcagaagtcattaagtttgtcggaggaagtaagtaagaaacaagca
gaagatgctgtgtctatggcatcttctttgcactccagtcctcttgcatctcctcagggc
tctccacgcaaagttggtaacatccagaggtctgataattgcagtcagatgaatctttct
ggatcctcttcatcacttgccagtgaaaccagtaacaagaacagtgggcaacgcagctac
ggaataggttatgctctcataccttctgccaagtcagataatttctcagactccagccac
agcgagatctcctcgcggtccagcatagtgagcaactgctctgtcgactccatgtctgca
gccctacaggacgagaggggtttgccccagtctcttagtgttgtggattcggtgggaaca
gaaagaaaagaacatcctccaccatcggctgagtacagtcagccttgcccaggttggccc
ctacctagaccggctataatcagaggattggctgtcacatcatccatgagcaacgaggag
atctcccatgaacatattacaatagaagcagcagacagtggccgtggaagctggacttca
tgttcaagtagttctcatgataacttccagaatatccaaattcagaaaagctgggatctc
ttgaattcttaccgccatgctcacttggatggacctattgctgaagtagaacccacaaac
tgttaccctgaagaggcgtatttgtattccgaagccttttccaaaaataacaggcagtcc
aaaaccagcatggaattggatcagtcccggcagagctgggcctcctctagctctctgtca
gacacgtatgaaacaaactatgggacgattaagcggagagggctggagaactcaacaatg
gagcagactgagattttggactctaaaccaggcactgatgcaacttataaaacggttact
tctagtacagaaaagggcctaatagtgtactgtgtcacctcacctaagaaggacgatagg
tatagggagccaccgcccacccctccgggatatatggggatttctttagcggacataaag
gaaggatcaccccaccacccacacttaaaacctccagactatagtgtggcagtgcagagg
tcaaagatgctacatagtgacctctctagactttcatcagcttctctcagtagtgaacca
gtggcctgtatttcatcgaagatgcctcagtggcatacccggcagccgtcccatcctaaa
ctaacagatatgactgacgcagatagtgaagaggatgaagatgaacaagtatcagcagtc
taa
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integrated database retrieval system
