KEGG   Crocodylus porosus (Australian saltwater crocodile): 109313783
Entry
109313783         CDS       T07440                                 
Symbol
TRAF2
Name
(RefSeq) TNF receptor-associated factor 2 isoform X1
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
cpoo  Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo04010  MAPK signaling pathway
cpoo04137  Mitophagy - animal
cpoo04141  Protein processing in endoplasmic reticulum
cpoo04210  Apoptosis
cpoo04217  Necroptosis
cpoo04621  NOD-like receptor signaling pathway
cpoo04622  RIG-I-like receptor signaling pathway
cpoo04920  Adipocytokine signaling pathway
cpoo05132  Salmonella infection
cpoo05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cpoo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    109313783 (TRAF2)
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    109313783 (TRAF2)
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    109313783 (TRAF2)
  09143 Cell growth and death
   04210 Apoptosis
    109313783 (TRAF2)
   04217 Necroptosis
    109313783 (TRAF2)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    109313783 (TRAF2)
   04622 RIG-I-like receptor signaling pathway
    109313783 (TRAF2)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    109313783 (TRAF2)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    109313783 (TRAF2)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    109313783 (TRAF2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpoo03019]
    109313783 (TRAF2)
   04121 Ubiquitin system [BR:cpoo04121]
    109313783 (TRAF2)
Enzymes [BR:cpoo01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     109313783 (TRAF2)
Messenger RNA biogenesis [BR:cpoo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     109313783 (TRAF2)
Ubiquitin system [BR:cpoo04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    109313783 (TRAF2)
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf TRAF3_RING zf-C3HC4 zf-RING_6 Thioredoxin_3 zf-C3HC4_2 CEP104_ZnF zf-C3HC4_4 Sina_ZnF zf-C3HC4_5
Other DBs
NCBI-GeneID: 109313783
NCBI-ProteinID: XP_019396039
Ensembl: ENSCPRG00005011079
UniProt: A0A7M4EX49
LinkDB
Position
Unknown
AA seq 553 aa
MSSTGAVLATLHPAQDFEAHRGFLVHMAAGNLTPPGSLDLNQPGFSKEILGTKLEGKYLC
SECKNILRRPFQAQCGHRYCSYCLKKIISSGPQKCAACIQEGIYEEGVSTLEINSAFPDN
AARREVESLPAVCINDGCTWKGTIKEYESCHEGNCPFMLIMCQACKGMIKLNDKERHSER
ECPERSLNCKYCKLLFYFPDIKAHDEICPKFPLTCEGCGKKKIPREKFQDHVKTCGKCKV
PCRFQAVGCADMVENEKLLDHEGKCLAEHLYMLLSFVLSLKAGSADLKHLSALLPSQGNS
MLLTGNSLCSESELSKSLELLARCEALERKTVTFENIVCVLNREVERVSLTAEAYSRQHR
LDQEKIETLSNKVRQLERSIGLKDLALADMEQKIRDMEASTYDGVFIWKITDFARKRQEA
ITGRVPAIFSPAFYTSKYGYKMCLRVYLNGDGTGRGTHLSLFFVVMKGPSDALLRWPFNQ
KVTLMLLDQNNREHIIDAFRPDVTSSSFQRPVSEMNIASGCPLFCPVSKMEAKNSYVRDD
AIFIKAIVDLTGL
NT seq 1662 nt   +upstreamnt  +downstreamnt
atgtctagtacaggtgctgttttggcaacacttcatccagcgcaggatttcgaggcacac
cgtgggtttttggttcacatggcagcaggaaacttgactccacctggttctttggattta
aaccaacctggtttttcaaaggagatactagggactaaattggagggcaaatacctctgc
tcagagtgcaagaatattctgagaaggccatttcaagctcagtgtggacaccgctattgt
tcttactgcctgaagaaaattatcagctcgggacctcagaagtgtgcagcctgtattcag
gaaggaatctatgaagaaggagtttccactttagaaataaactcagcttttccagacaat
gcagctcgtcgagaggtggaaagtttgccggctgtctgtattaatgatggctgcacgtgg
aaggggactattaaagaatatgagagctgccatgaagggaactgcccgttcatgctgatt
atgtgccaggcatgtaagggaatgatcaaactgaatgacaaggagcgccattctgaacgg
gaatgccctgagagaagcctcaactgcaaatactgcaaattgcttttctactttcctgac
attaaggctcatgatgagatctgccctaaatttccactgacttgtgagggctgtgggaaa
aagaagattccaagagaaaagtttcaggaccatgtgaagacttgtggcaaatgtaaagtg
ccttgcagatttcaggctgttggatgtgctgacatggtggaaaatgagaagctgctggat
catgaaggcaaatgtctggcagagcatctatacatgctgctgagttttgtgctcagcctc
aaggctggctctgcagacttgaagcacctttctgcccttttgccatctcagggcaactcc
atgctactgacaggcaactccctgtgctcagagtcagagctctccaaatccctggaattg
ctagcaaggtgtgaagcccttgagaggaaaacagtgacctttgagaacattgtgtgtgtg
ctgaaccgggaagtggagagggtctctctgacagctgaagcctacagtcgccagcaccgg
ctggaccaggagaagattgaaacgctcagtaacaaggtccggcaactggaaaggagcatt
ggactgaaggatctggccttggctgatatggagcagaagatccgcgacatggaagcgtca
acttatgatggtgttttcatctggaagattacggactttgccaggaaacgtcaggaagca
ataacaggccgcgtgcctgccatcttctccccagctttctacacaagcaagtatggctat
aagatgtgtttgcgtgtttaccttaacggcgatggcactggccgtgggactcacctgtct
ctgttcttcgtggtgatgaaaggacccagtgacgcactcctacggtggcccttcaaccag
aaggtgactctaatgctgttggatcagaacaacagggagcacattatcgatgctttccgt
cctgacgttacgtcctcatcctttcagcgacctgtcagcgaaatgaacattgccagcggc
tgcccactattctgtcctgtctccaagatggaagccaagaattcctatgtacgtgacgac
gccatctttattaaagccattgtagatctcacaggcctctga

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