Crocodylus porosus (Australian saltwater crocodile): 109314435
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Entry
109314435 CDS
T07440
Symbol
AGRN
Name
(RefSeq) agrin isoform X1
KO
K06254
agrin
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo04512
ECM-receptor interaction
cpoo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109314435 (AGRN)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109314435 (AGRN)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cpoo00535
]
109314435 (AGRN)
Proteoglycans [BR:
cpoo00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
109314435 (AGRN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_1
Kazal_2
Laminin_G_2
Kazal_1
EGF_laminin
SEA
EGF
Laminin_G_3
Kazal_CFAI
hEGF
Motif
Other DBs
NCBI-GeneID:
109314435
NCBI-ProteinID:
XP_019397154
Ensembl:
ENSCPRG00005002164
LinkDB
All DBs
Position
Unknown
AA seq
1984 aa
AA seq
DB search
MTACQYPIAPGPLERDRMYQHKVSLVVRYFMIPCNICLILLATSTLGFAVLLFLNNYKPV
NYFPQSLPTPQDACRGMLCGFGAVCERSPTDPSQASCVCKKTVCPSVVAPVCGSDYSTYS
NECELEKAQCNQQRRIKVISKGPCGSKDPCAEVTCSFGSTCARSTDGQSAKCICPSSCRG
VAEGTVCGSDGKDYHSECELNKHACDTQQNVFKKFDGPCDPCKNAVNDLSRVCRVNPRTR
RADLLFRPENCPPKRDPVCGDDGVTYDSECVMGRSGALRGLEIQKVRSGQCQPQDKCRDE
CKFGAVCLNRRGTTRCSCDRITCDGAYQPVCARDSRTYSNDCERQKAECQQKAALPVKHE
GPCDLGTPSPCLSVECTFGATCVVKNQEAVCECQQVCQSRYDPVCGTDNRPYGNPCELSA
TACVLKKEIKVKHKGPCDRCGKCQFGAICEAETGRCVCPTECVASSQPVCGTDGNTYGSE
CELHVRACTQQTNIQVAAQGDCKSCGSTVCSFGSKCVGGQCACPRCERQPFSPVCGSDGV
TYDNPCELHVASCQQKKTIEVSRTGPCEDECGSGGSGSGDDGECEQDRCRRLGGLWDEDM
EDDRCVCDFTCLAVPRSPVCGSDGVTYSNECELKKSRCEKRQDLYATGQGACRTTTMTPP
PLVPLHCSQTVYGCCPDNMTQALGVGSAGCPSTCQCNAYGSYGGACDPTTGQCSCKPGVG
GLKCDRCEPGFWNFRGIVTDSKSGCTPCNCDPVGSVRDDCEQMTGLCSCKTGITGMKCNQ
CPNGSKLGMTGCEKDPSAPKSCHEMICEFGASCVEVNGFAHCECPSPLCTEANMTKVCGS
DGVTYGDQCQLKTIACRQAQIITVKHAGQCHESITPASHTLPPTPLPVPTQALDRLLLPP
PLQLATRAPDSTEKLTGSLLVEASPTPRSHPATRRITTARPATTPWIMHGLRKTTVHPIL
TAPVVPATIQPAFAESGSAEGSGDQEMGISGDQEASGAGSAGEEEPEESQVTPTPAIERA
TCFNTPLGCCSDGKTAAIDAEGSNCPATKVFQGVLILEEVEGQELFYTPEMADPKSELFG
ETARSIESALDELFRNSDVKRDFKSIRVRDLGQSNAVRVIVESHFDPATSYTAADVQKAL
LKQIKASKKKTILVKKPQQDHVKFMDFDWIPRLFTTTTTTTTATTMAPATTRRFTTATTT
TAHVLRPETMGRPSSKLAAPVTTRRPTATVPATTRRKPTRQPPATKKPARPCDSHPCLHG
GTCEDDGKEFTCSCPVGKGGAVCEKSIRYFIPSFGGKSYLAFKTMKAYHTVRIAMEFRAS
ELSGLLLYNGQNRGKDFISLALVNGFVELRFNTGSGTGIITSKVPVEPGKWHQLVVNRNR
RNGMLSVDGESHVNGESPTGTDGLNLDTELFIGGAPEDQMLVVADRTAATAGLKGCIRLL
DVNNQMYDLREKGSDVMYGSGVGECGNDPCHPNPCHHGGICHVKEAEMFHCECLSTYTGP
TCADERNPCDPSPCHVSATCLVLPEGGAMCACPMGREGDFCEFVTEQDQSMPFLPEFNGF
SYLELSGLQTFVPDIQEKLSMEVVFLAKNPSGMIFYNGQKTDGKGDFVSLALHDGYLEYR
YDLGKGAAVLRSKEPIPLNTWVSVFLERNERKGVMRINHGERVMGESPKSRKVPHAFLNL
KEPLYVGGAPDFSKLARAAAISTSFDGALQRISIKGIPVLKKENIRSAIEISTFRSHPCT
QKPNPCQNGGKCNPRLESYECACQRGFSGAHCEEVIIEKAAGDSEAIAFDGRTYMEYHNA
VTKSQLTNEIPAPEVLDYPADHSEKALQSNHFELSIKTEATQGLILWSGKGLERSDYIAL
AIVNGHVQMTYDLGSKPVVLRSTVPVNTNQWVHIKAYRVQREGSLQVGNEAPITGSSPLG
ATQLDTDGALWLGGMEKLNVAHKLPKAYSTGFTGCIRDVIVDRQELHLVEDALNKPTILH
CSAK
NT seq
5955 nt
NT seq
+upstream
nt +downstream
nt
atgacggcctgccagtaccccatagcgcccgggcccctggagcgggaccgcatgtaccag
cacaaagtctccctggtggtgcgctacttcatgatcccgtgcaacatttgcctcatcctt
ttggccacctccaccctgggatttgccgtgctgctcttcctcaataactacaagcccgtc
aactattttccccagtcactgccgacgccgcaagatgcatgccgaggaatgctctgtggg
ttcggagctgtgtgcgaaaggagtcccactgacccatcccaggcctcttgcgtctgcaaa
aagaccgtgtgcccctcagtggtggctcctgtctgtggctcggactattccacctacagc
aatgaatgtgagctggagaaggcccagtgcaaccagcagaggaggatcaaagtcatcagc
aagggaccctgtggttccaaggacccgtgtgcggaggtgacgtgtagttttggcagcacc
tgtgcccgctctactgatgggcagtcggccaagtgcatctgcccatcctcgtgccgcggg
gtggccgagggcaccgtgtgtggcagtgatggcaaggactaccacagtgagtgtgagctc
aacaagcacgcctgcgacacacagcagaacgtcttcaagaagttcgacgggccctgcgac
ccttgcaagaacgccgtcaacgacctgagccgggtctgccgggtgaaccctcgcacccgc
cgggcggacctgctcttccggcccgaaaactgccccccaaagagggacccagtgtgcggc
gatgatggggtaacctatgacagcgagtgcgtcatgggacggtcgggcgctctgcggggg
ctggagatccagaaggtgcgttcggggcagtgccagccgcaggacaagtgcagggacgaa
tgcaagttcggcgccgtgtgcctcaaccggcgtggcaccacccgctgctcctgcgatcgc
atcacctgcgacggcgcctatcagcccgtctgcgcccgggacagccggacgtacagcaac
gactgcgagcgccagaaggcagagtgccagcagaaagctgccctccctgtaaagcacgag
gggccctgtgacctgggcacccccagcccctgcctcagcgtggagtgcacctttggggcc
acctgcgtggtgaagaaccaggaggcggtgtgcgagtgccagcaggtctgccaaagccgc
tacgaccccgtctgcggcaccgacaaccgcccctacggcaacccttgtgagctgagtgcc
acggcctgcgtcctgaagaaggagatcaaagtcaagcacaaagggccctgcgaccgttgc
ggcaaatgccagtttggcgccatctgcgaggcagagacgggccgatgcgtgtgccccacg
gagtgcgtggcctcctcgcagcccgtgtgcggcaccgacggcaacacctatggcagcgaa
tgcgagctccacgtccgggcctgcacccagcagaccaacatccaggtggctgcgcaagga
gactgcaagtcctgcggcagcacggtgtgctcctttggaagcaagtgcgtgggcgggcag
tgcgcgtgcccgcgctgcgagaggcagcccttctccccggtgtgcggcagcgacggcgtg
acctatgacaacccgtgtgaactgcacgtggcctcctgccagcagaagaagaccatcgag
gtctccaggacggggccgtgtgaggacgaatgtggctcaggggggtctggctccggagac
gacggggagtgcgagcaggaccggtgccggcggcttggaggcctgtgggatgaggacatg
gaggacgaccgctgcgtgtgcgacttcacctgcttggctgtgccgcgcagcccggtgtgc
ggctccgacggagtgacctattccaacgagtgtgagctcaaaaagtcacgctgtgagaaa
cgccaggacctctacgccaccgggcaaggagcctgccgcaccaccacgatgaccccccca
ccactggtgcccctgcactgcagccagaccgtgtatggatgctgccctgacaacatgacc
caggcgcttggcgtgggctcagccgggtgcccaagcacctgccagtgtaatgcctacggc
tcctatgggggggcctgcgaccccaccaccggccagtgctcctgcaaacccggcgtggga
ggcctcaagtgcgaccgctgcgagcccggcttctggaacttccgcggcatcgtcaccgac
agcaagagcggctgcaccccttgtaactgcgacccggtgggctccgtccgtgatgactgc
gagcagatgactggactctgctcctgtaagacgggcatcaccggcatgaaatgcaaccag
tgccccaatggcagcaagctgggcatgactggctgtgagaaagacccatcggcaccaaaa
tcctgccatgagatgatctgcgagttcggggcgtcatgcgtggaggtcaatggctttgcc
cactgtgaatgcccatccccactctgtacagaggccaacatgaccaaggtgtgcggctct
gacggtgtcacctacggtgaccagtgccagctgaagaccattgcgtgccggcaagcgcag
atcatcacggtgaagcacgccggacagtgccatgagtccatcactcccgcgagtcacacc
ttgcctcccacaccgctgcccgtgcccacgcaggccctggacagactcctcctccccccg
cctctgcagctcgccactcgggcccccgactccacggagaaactcaccgggtccctgctg
gtggaggcgagtcccactccgagaagccatcccgctaccagacggataaccactgctcgg
ccagccaccactccctggatcatgcacggccttcgcaaaaccactgtccaccccatcttg
actgctccggtggtcccagccaccatccagcctgccttcgctgagtccggcagcgcagaa
ggcagcggagaccaggagatgggcatcagcggggaccaggaagctagcggagccggctct
gcaggagaagaggagccagaggaaagccaagttacacccactccagccattgaaagagcc
acctgctttaatacccctctgggctgctgctctgatggcaagacagccgccatcgatgca
gaagggagcaactgtcctgccaccaaggtcttccaaggagtactcatcctagaggaggtg
gagggccaggagctgttctacacgcccgagatggccgaccccaaatcggagctcttcggg
gaaactgcccggagcatcgagagtgcgctggacgagcttttccgcaactctgatgtcaag
agggatttcaagagcatccgcgtgagggacctgggtcagagcaatgccgtccgtgtcatc
gtcgagtcccactttgatccagccacgtcctacacagcggccgacgtccagaaggccctt
ctgaagcagatcaaagcctccaagaagaagaccatcctggtgaagaagccgcaacaggat
catgtcaaattcatggacttcgactggatccccaggctcttcaccaccacgaccactaca
accaccgccaccaccatggcgcccgccaccacgcggaggttcaccaccgccaccaccacc
accgcccacgtcctgcgcccagaaaccatggggcggcccagcagcaagttggcggcaccc
gtcaccaccaggagacccactgccaccgtgccagccaccaccaggaggaaacccacgcgc
cagcccccggccaccaagaagccggcccggccctgtgactcccacccctgcctgcatggc
ggcacctgcgaggacgatgggaaagagttcacctgcagctgcccggtgggaaagggaggc
gctgtgtgtgagaagtccatcaggtacttcatccccagcttcggcgggaagtcctacctg
gccttcaagacaatgaaggcctatcacacggtgcgcatcgccatggagtttcgggcctcc
gagctcagcgggctgctgctctacaacgggcaaaaccggggcaaggacttcatctccctg
gcacttgtcaatggctttgtggagctcaggttcaacacaggatctggtaccggcatcatc
accagcaaagtgcctgtcgagcctggcaagtggcaccagctggtggtgaaccggaaccgc
cgtaacggcatgctgtcggtggatggggagtcgcacgtgaatggggagagccccaccggc
accgacgggctgaacctggacaccgaattgttcatcggaggggcgccggaagaccagatg
cttgtggtggcagaccgcaccgcagccacggctggcctgaagggctgcatccgtctgctg
gacgtgaacaaccagatgtacgacctgcgggagaagggcagcgacgtgatgtacggcagc
ggggtgggcgagtgcggcaatgacccctgccaccccaacccctgccaccacggcggcatc
tgccacgtcaaggaggccgagatgttccactgcgagtgtctctccacctacacaggtcca
acctgtgccgacgagaggaacccctgcgaccccagcccgtgccacgtctcggccacctgc
ctggtgctgccagagggaggtgccatgtgcgcgtgccccatggggcgggaaggggatttc
tgcgagttcgtcacagagcaggaccagtccatgcccttcctcccggagttcaatggcttc
tcctacctggagctgagcgggctgcagacctttgtgcctgatatccaggaaaagttgtcc
atggaggtcgtgttcctggccaagaaccccagcggcatgatcttctacaacgggcagaag
acagacggcaaaggggactttgtctcgctggccttgcatgacggctacctggagtacaga
tacgacctgggcaaaggggcagcggtgctcaggagcaaggagccaatccccctgaacaca
tgggtcagcgtcttcctggagaggaacgagcgcaagggcgtgatgaggattaaccatggc
gagagggtgatgggagagtcaccgaaatcccgtaaggtgcctcacgccttcctgaacctg
aaggagcccctgtatgttgggggcgcgcccgatttcagcaaactggctcgcgccgcggcc
atctccaccagcttcgatggcgccctgcagaggatctccattaaggggatccctgtcctg
aagaaggagaacatccgcagcgccatcgagatctccaccttccgctcccacccctgcacc
cagaagcccaacccctgccagaacgggggcaagtgcaacccccggctggagagctacgag
tgcgcctgccagaggggcttctccggtgcccactgcgaggaagtgatcatcgagaaggca
gccggggactccgaggccattgcctttgatggcaggacctacatggaataccacaacgcc
gtgacaaagagccaactgactaatgagatcccagctcccgaagtgctggactatcccgca
gaccacagtgagaaggccttgcaatccaaccactttgaactgagcatcaagacggaggcc
acccaaggcttgatcctgtggagcgggaaggggctggagcgctcggactacatcgccctg
gccatcgtgaacggccacgtgcaaatgacctacgacctcggctccaagccggtcgtcctg
cggtccaccgtcccggtcaacacgaaccagtgggttcatatcaaagcttacagagtgcag
agagagggctccttgcaggtgggcaacgaagcccccatcactggttcgtccccgcttgga
gcaacacagctagacacggacggggccctctggctggggggaatggagaagctcaacgtg
gctcacaagctgcccaaagcctacagcaccggcttcaccggctgcatacgggacgtgata
gtcgaccgccaagaactgcacctggtggaggacgctttaaacaaacccacgatattacac
tgctcggccaaatag
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integrated database retrieval system
