Crocodylus porosus (Australian saltwater crocodile): 109316457
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Entry
109316457 CDS
T07440
Symbol
CACNA1C
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1C isoform X1
KO
K04850
voltage-dependent calcium channel L type alpha-1C
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo04010
MAPK signaling pathway
cpoo04020
Calcium signaling pathway
cpoo04260
Cardiac muscle contraction
cpoo04261
Adrenergic signaling in cardiomyocytes
cpoo04270
Vascular smooth muscle contraction
cpoo04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109316457 (CACNA1C)
04020 Calcium signaling pathway
109316457 (CACNA1C)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
109316457 (CACNA1C)
09153 Circulatory system
04260 Cardiac muscle contraction
109316457 (CACNA1C)
04261 Adrenergic signaling in cardiomyocytes
109316457 (CACNA1C)
04270 Vascular smooth muscle contraction
109316457 (CACNA1C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpoo04040
]
109316457 (CACNA1C)
Ion channels [BR:
cpoo04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
109316457 (CACNA1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
CAC1F_C
PKD_channel
DUF4834
Motif
Other DBs
NCBI-GeneID:
109316457
NCBI-ProteinID:
XP_019400096
Ensembl:
ENSCPRG00005013760
LinkDB
All DBs
Position
Unknown
AA seq
2154 aa
AA seq
DB search
MVNENKRMYIPEENHQGSNYGSPRPAHANMNANAAAGLAPEHIPTPGAALSWQAAIDAAR
QAKLMGSAGNATISTASSTQRKRQQYGKQKKQGTTTATRPPRALLCLTLKNPIRRACISI
VEWKPFEIIILLTIFANCVALAIYIPFPEDDSNATNSNLERVEYLFLIIFTVEAFLKVIA
YGLLFHPNAYLRNGWNLLDFIIVVVGLFSAILEQATKADGGNSIGGKGAGFDVKALRAFR
VLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFMGKMHKTCYH
AHGALADTPAEEDPSPCAPQSAHGRQCQNGTECKAGWEGPKHGITNFDNFAFAMLTVFQC
ITMEGWTDVLYWVNDAIGRDWPWIYFVTLIIIGSFFVLNLVLGVLSGEFSKEREKAKARG
DFQKLREKQQLEEDLKGYLDWITQAEDIDPENEDEGMDEEKPRNRSTSAGLPDKKKGKFA
WFSHSTETHVSMPTSETESVNTDNVAGADIEGENCGARLAHRISKSKFSRYWRRWNRFCR
RKCRAAVKSTVFYWLVIFLVFLNTLTIASEHYHQSNWLTEVQDTANKVLLALFTAEMLLK
MYSLGLQAYFVSLFNRFDCFIVCGGILETILVETKIMPPLGISVLRCVRLLRIFKITRYW
NSLSNLVASLLNSVRSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDEMQTRRSTFDNFPQ
SLLTVFQILTGEDWNSVMYDGIMAYGGPSFPGMLVCIYFIILFICGNYILLNVFLAIAVD
NLADAESLTSAQKEEEEEKERKKLARTASPEKKQEIEKPAVEEETKEEKIELKSITADGE
SSPATKINVEDYQPNENEEKNPYPTTEAPGEEDEEEPEMPVGPRPRPMSELHLKEKAVPM
PDASAFFIFSPSNRFRVHCHRIVNDNIFTNLILFFILLSSISLAAEDPVRHYSFRNQILF
YFDIVFTVIFTIEIALKMTAYGAFLHKGSFCRNYFNILDLLVVSVSLISFGIQSSAINVV
KILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMFACIGVQLFKGK
LKSCSDSSKQTPAECKGYFITYKDGEVTQPMIQPRSWENSKFDFDNVLNAMMALFTVSTF
EGWPELLYRSIDSHMEDVGPIYNHRVEISIFFIIYIIIIAFFMMNIFVGFVIVTFQEQGE
QEYKNCELDKNQRQCVEYALKARPLRRYIPKNQYQYKVWYVVNSTYFEYLMFILILLNTI
CLAMQHYGQSCMFKEAMNILNMLFTGLFTVEMVLKLIAFKPKGYFSDPWNVFDFLIVIGS
IIDVILSETNHYFCDAWNTFDALIVVGSIVDIAITEVNPAEHTQCSSSMNAEENSRISIT
FFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQVFGKIA
LNDTTGINRNNNFQTFPQAVLLLFRCATGEAWQEIMLACLSNKKCDPESEQANSTEEDQS
CGSSFAIFYFISFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWAEYDP
EAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVMFNATLFALV
RTALRIKTEGNLEQANEELRAIIKKIWKRTSMKLLDQVVPPAGDDEVTVGKFYATFLIQE
YFRKFKKRKEQGLVGKPSQRNALSLQAGLRTLHDIGPEIRRAISGDLTAEEELDKAMKEA
VSAASEDDIFRRAGGLFGNHVSYYQSDGRSTFPQTFTTQRPLHINKSGNNQGDTESPSHE
KLVDSTFTPSSYSSSGSNANINNANNTALCRFPSPPNFPSTVSTVEGHGTPLSPTIRVQE
APWKLGSKRTHYYETSGRSGSRDSQLAIVCQEEVSQDETYDENLNEDVEYCSEPSLISTE
MLSYQDDENRQLTPPENNKGEDNRQSPRRGFLCSSSLGRRASFHLECLKRQKNQGVDVSQ
KTVLPLHLVHHQALAVAGLSPLLQRSHSPTMFSRLCATPPATPCSRGWPEQTIPTLRLDG
AESSEKLNSSFPSIHCSSWYSDRASCSSARRARPVSLTVPSQTGGSGRQFHGSAGSLVEA
VLISEGLMQFAQDPKFIEVTTQELADACDMTIEEMENAADNILNEVPHCSRDLE
NT seq
6465 nt
NT seq
+upstream
nt +downstream
nt
atggtcaatgaaaacaagaggatgtacattccggaggaaaaccatcaaggttccaactat
gggagtccccgtccagctcatgccaacatgaatgccaatgcagctgcagggcttgcccca
gagcatatccctactccaggggcagctctgtcctggcaggctgctatcgatgctgccaga
caggccaaattgatgggtagtgctggcaatgcaacaatatccacagctagctccacacag
aggaaacggcagcagtatgggaaacagaaaaaacagggtactaccacagctacacgtcct
ccccgggcattgctgtgtttaacactgaaaaatcccatccggagggcatgtatcagcatc
gtcgaatggaaaccatttgaaataattattttactgactattttcgccaattgtgtggcc
ttagctatctatatcccctttccagaagatgattccaatgccaccaattccaatctggaa
cgagtggaatatctctttctcataatttttacagtggaagcatttttaaaagtaatagca
tatggacttctctttcaccccaacgcttacctccgcaatggctggaatttactagatttt
ataattgtggtagtagggctttttagtgcaattttagaacaagcaaccaaagcagatggg
gggaattcaataggagggaaaggtgccggatttgatgttaaagcactgagggcttttcga
gtgttacgccccttacggctggtatctggagttcctagtctccaggtggttttaaattca
atcatcaaggccatggttcccttgttgcacattgccctgctggtgctgtttgtcataatt
atctatgccataattgggctggagctattcatggggaagatgcacaagacctgctaccat
gcacatggggcattagcagatacacctgcagaagaggatccttctccttgtgctcctcag
tcagcacatggacggcagtgtcagaatggcacagagtgcaaagctggctgggaaggccct
aagcatggcattacaaactttgacaattttgcttttgccatgttaactgtgtttcagtgc
atcactatggaaggctggacagatgtactgtactgggtcaatgatgccataggaagggac
tggccctggatctattttgttacactaatcatcatagggtcattttttgtacttaacttg
gttctcggtgtgcttagcggggagttttcaaaggaaagagaaaaggcaaaggcccggggt
gactttcagaagttgcgggagaagcagcaactggaagaggacttgaaggggtacctggac
tggataactcaagcagaagacattgatccagaaaatgaagatgaaggcatggatgaggag
aagcctagaaacagaagcacttcagctggcttgcctgataagaagaaagggaagtttgct
tggtttagtcactccacagaaacccatgtgagcatgcccacaagtgagacggagtctgta
aacacagacaatgtggctggagctgacattgaaggagaaaactgtggtgcaagattggcg
catcggatctccaaatctaagtttagccggtactggcgccggtggaaccggttctgcagg
agaaagtgtcgagctgctgtcaagtccactgttttctattggctggtgattttccttgtg
ttcctcaacactctcaccatcgcctctgaacactaccaccagtcaaactggctcactgag
gtccaagatactgccaataaggtgctgctagctcttttcacggcagagatgctactgaaa
atgtacagcctcggtctccaggcctactttgtgtctctcttcaaccgctttgactgcttt
attgtttgtggaggaatcctggaaaccattctggtggagaccaagataatgccaccactg
ggcatctcagtgttgcgatgtgtccgactcctgagaatatttaagatcacaaggtattgg
aactccctgagtaacctcgtagcttcattgctgaactctgtccgctccatcgcctccttg
ttgctgcttttgttcctcttcatcatcatcttctcactcctgggaatgcagctctttggg
ggcaagtttaacttcgatgagatgcaaaccaggaggagcacatttgacaacttcccccag
tctctcctcactgtatttcagatcctgactggggaggactggaattcagtgatgtatgat
gggatcatggcttatggcggcccctcttttccgggaatgttggtctgtatttacttcatc
atcctcttcatctgtggaaactatatcctcctgaatgtatttttggccattgcggtggac
aatcttgccgatgctgagagtttgacatctgcacaaaaagaagaggaagaggaaaaagaa
aggaaaaaactagctaggactgctagtccagaaaagaaacaggagatagagaagccagct
gtggaggaggagacaaaggaggagaaaatagagctgaaatcgatcactgctgatggagag
tcctcacctgctaccaagatcaatgtggaggactatcagcccaatgaaaatgaagaaaag
aatccatatcccactactgaagctccaggagaggaagatgaggaggagcctgagatgcct
gtgggtcctcggccacgcccaatgtctgaactgcatctcaaggaaaaagctgtgcccatg
ccagatgccagtgctttctttatcttcagcccaagcaacaggtttcgtgtccactgccat
cgcatcgttaatgataacattttcaccaacctgatcctctttttcatcttgctcagcagc
atctctttggcagccgaggaccctgtcagacactactcctttaggaaccaaattctcttt
tattttgatatagtttttactgtcattttcaccattgaaattgctctgaagatgactgca
tatggggctttcctacacaagggctccttctgcaggaactacttcaacatcctagatctg
ctggtagtcagcgtttctctcatctcctttgggatccaatctagtgccatcaacgtagtg
aagatcttacgtgtactacgagtgctcagaccattgagggccatcaacagagccaaaggg
ctaaagcatgtggtccagtgcgtgtttgttgccatcagaaccattgggaacatagtgatc
gtcaccactttgctgcagttcatgtttgcctgcattggagttcagttgttcaagggcaaa
ctgaagagctgcagtgatagctccaagcaaacacccgcagagtgcaaggggtatttcatt
acatacaaagatggcgaggtcacccagccaatgatccagccccggagctgggagaacagc
aagtttgactttgacaacgttttgaatgccatgatggcgctctttactgtttcaactttt
gagggctggccagagctgttgtacagatccattgattcccacatggaagatgttggaccc
atctataaccacagggtggagatctccattttcttcatcatctatatcatcatcattgcc
ttcttcatgatgaacatcttcgttggtttcgtcattgtcacattccaggaacaaggagag
caggagtacaagaactgtgaactggacaagaatcagcgtcagtgtgtagaatatgccctg
aaggctcgtcccttgaggaggtacatccctaagaaccaataccaatacaaagtgtggtat
gtggtgaactccacctattttgagtacctgatgttcattctgatcctgctgaacactatc
tgcctggccatgcaacactacggtcaaagctgcatgttcaaggaagccatgaatatcctc
aacatgctcttcactggtctcttcactgttgagatggttctgaaactaatcgccttcaaa
cctaagggttactttagtgatccttggaatgtttttgacttcctcatcgtaattggcagc
attatagacgtcattctcagtgaaactaatcactatttctgtgatgcatggaatacattt
gacgccttgattgttgtgggtagcattgttgatatagcaatcaccgaggtgaacccagct
gaacatacccaatgctcttcctctatgaatgcagaggaaaactctcgcatctcaatcacc
tttttccgactcttccgcgtgatgcgtcttgtgaagctcctgagccgaggggagggcatc
cggacactgctttggaccttcatcaagtccttccaggctctcccctatgtggctctatta
atagtgatgctattcttcatctatgccgtgattgggatgcaggtgtttggtaaaattgca
ctgaacgataccacgggaatcaaccgcaacaacaactttcagaccttcccacaggcagta
ctgctgcttttcaggtgtgccacaggcgaggcctggcaggagatcatgctggcctgcctg
tcaaacaagaagtgtgatcctgaatcagaacaagccaactctactgaagaagaccaatcc
tgtgggagtagctttgccatattttatttcatcagcttctacatgctctgtgccttcctg
atcatcaatctttttgtagctgttataatggataactttgattacctgacgcgggactgg
tccattttaggaccacaccacctggatgagtttaaacggatttgggcagagtatgatcct
gaagccaagggacggatcaaacaccttgatgtggtgacactgctccggaggattcagcct
ccattgggctttgggaagctctgtcctcatagagtggcttgcaagcgtctcgtctccatg
aatatgccactaaatagtgatgggactgtcatgtttaatgctactctctttgcattggtc
agaacagcactgaggatcaaaactgaaggtaacctggagcaagctaatgaagaactgcga
gcaataataaagaaaatctggaagcgcaccagtatgaagctgctggatcaggtcgtgccc
ccagctggcgatgacgaggtgactgttgggaagttttatgccactttcctgatccaagag
tatttccggaaattcaagaaacgcaaagaacagggcctcgttggcaaaccttcacagagg
aatgctctctccttgcaggctggtctgcgcacactgcatgacattgggccagagatccga
cgggcaatctcaggggacctgacagctgaagaggaactagacaaggccatgaaagaagct
gtctctgctgcttctgaagatgatatctttaggagggctggtggcttgtttggaaaccat
gtcagctactaccaaagtgatggcaggagcaccttcccgcagacattcactacccagcgc
cctttgcacatcaataaatctggcaacaaccagggagatactgagtccccatcccatgag
aagctagtggattccacctttactcctagcagctactcttcttcaggttctaatgccaac
atcaacaatgccaacaacactgccttgtgccgcttcccaagcccacccaattttccaagc
actgtcagcacagtagagggacatggcactcccttgtcacccaccatacgtgtgcaggag
gccccttggaaacttggctccaaaaggacacattactatgaaacatcgggacgctccggt
tccagagacagccagctggcaatcgtttgccaagaggaagtgtctcaggatgagacttat
gatgaaaatttgaatgaagatgttgaatactgcagtgagccaagcctgatctctactgaa
atgctctcataccaagatgatgaaaacagacagctgacgccaccggaaaataacaaaggg
gaggacaacaggcagtctccaaggaggggatttctttgctcctcatcattaggtcgaaga
gcatcatttcatttggagtgtctgaagagacagaagaaccaaggtgtagatgtctcacag
aagacggttctgcccttgcatctcgtacatcatcaggcactagccgtggcaggtctgagt
cccctgctccagagaagccattccccaaccatgttctcccggttgtgtgccacaccccct
gccacaccctgtagccgtggctggccagagcagaccatcccaaccttgcggcttgacgga
gcagagtccagtgagaaactcaatagtagcttcccatcgatacactgcagttcttggtac
tccgaccgcgccagctgcagcagcgctagaagagcccggccggtctctctcaccgtcccc
agccaaactggagggagcggcaggcagttccatggcagtgctggcagccttgttgaagcg
gtcttgatttcggaaggactgatgcagtttgctcaagatccaaagttcattgaggtcaca
acccaagagctagcagatgcgtgtgacatgacgatagaagagatggaaaatgcagcagac
aacattctcaatgaagtgcctcactgttctcgtgacctggagtaa
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integrated database retrieval system
