Crocodylus porosus (Australian saltwater crocodile): 109319884
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Entry
109319884 CDS
T07440
Symbol
NLRC4
Name
(RefSeq) NLR family CARD domain-containing protein 4 isoform X1
KO
K12805
NLR family CARD domain-containing protein 4
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo04621
NOD-like receptor signaling pathway
cpoo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
109319884 (NLRC4)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109319884 (NLRC4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cpoo04054
]
109319884 (NLRC4)
Pattern recognition receptors [BR:
cpoo04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
109319884 (NLRC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nlrc4-like_WHD
NACHT
NLRC4_HD
CARD
NB-ARC
nSTAND3
LRR_4
AAA_30
NOD2_WH
AAA_22
AAA_16
Motif
Other DBs
NCBI-GeneID:
109319884
NCBI-ProteinID:
XP_019405257
Ensembl:
ENSCPRG00005013358
LinkDB
All DBs
Position
Unknown
AA seq
1023 aa
AA seq
DB search
MDFIKKNSVHLIQRMGMVTVKQLVDDLFASNVLSGEEMNTIVCEKTQQDASRMMIYMVLN
KGSEACRILVKALEKQNPFLYQELYGYCITSQVKPDLDDLAQDLMDLYLSPFFQKFHPLG
TDIDIIFDLKTTFTDILLWNKDTHNTRKGQLTLSILLGELKTPCIIEGEAGKGKTTLMKR
IAVLWASGNCPALTHFKFVFFISLSSAKEGLYETVCDQLLTVPYTIPKQDFMKMLLGLRQ
KVLFLLDGYDEFRPSTCPEIEAMIKENHKFKNMVIVTTRTESIHKVRQFGSLIAETGDLT
EENARQLINNVLEYELAKGLLIHLEETNFMKNLLKTPLFVVIACAIQMGENNFNPSTQTA
LFCTLYDLMVQKNKYKTETITANHIKLSINHCGDLALDGVLDQRFDFQSEDLSNIKEEVL
LASGLLNKYTAQRLMPVYRFFHKSFQEYTAGRRLCSLLTSSKDTEVARGFSYLQKMDNIS
DITSTYCNLLLYTCGSSVDATRIVIKHLTAVYQRGSLFGLPSLSDPSLEGEPEKVENAEQ
HEVLQATNLNSFVECVINLFYESRSKSCLSGEFEEFFHGKRLYINTQSIPTYLFGFFKHL
PNCVSALELIKLDFFGNSSLDNMEDENTRNPQIYIPEKAVSLFFKWNQKIRALEITLHNF
NKLKKDDIKYLGKICCSASSLSLQINRSAGIAGTLKKVLETCKNMQDLIVESTPLTTEDE
QQIIAMTKLKEINIRDLQSKHLEGGLIDGIHNLINIEKLIFDNIKMNESDAKKLAEGIKL
LKKLHLLHLSHLTDVGDGMRCIVRAISAELGDLEEIHLVNCCLSGDAVEILAQNLCNLPK
LNVLDLSENYLGKDGKVAVHKLANSLNILPNMKVLMLPWGDDVNVCLSDLLVQLKTMPQL
TKLRLKRWSLTDVEVKVLGTFFEKTPLEDLQHLDLAMNCVTSNGWLSFIQALVNLNKLRF
LDFSSKCDLVPDPLLICKMSQVLTTLNYLKEIRLTGWKLDDHDLGLISDAKVSCGKEFQL
VNS
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atggattttattaagaagaacagtgttcaccttattcaaagaatgggaatggtcactgta
aagcagctagtggatgacctttttgctagcaatgtcctgtctggtgaagaaatgaatact
attgtttgtgaaaagactcaacaggatgcttcaagaatgatgatttacatggttttgaat
aaaggttcagaagcctgcagaattttggttaaagcacttgagaaacaaaaccctttcctc
tatcaggaattgtacggatactgtatcactagccaagtgaaaccagacttggatgacttg
gctcaggatttaatggacttgtatctatctcctttcttccaaaaatttcatccattgggc
actgatattgacatcatttttgatttgaaaactacctttacagacatcttgctttggaat
aaagatacacataacaccaggaaagggcaactcactttaagcatccttttgggtgaatta
aaaacgccctgcataatagaaggtgaagctggcaaaggcaaaacaacccttatgaagaga
attgctgtactatgggcttctgggaattgccctgctttgactcatttcaaatttgttttc
tttatcagcctgagcagtgcaaaagaaggactttatgaaactgtatgtgatcagcttctt
acagttccatataccatacccaagcaggacttcatgaagatgttgctgggactaagacaa
aaggttctttttctattagatggatatgatgaattcaggccctcaacctgcccagaaata
gaagcaatgattaaagaaaaccacaaattcaagaatatggtcattgttactaccaggact
gagtctattcataaggtcagacagtttggttcactcattgctgaaacaggagatctaaca
gaggagaatgctaggcagctcattaataatgtcttggaatatgagctggccaagggtctg
ctaattcatctagaggaaactaatttcatgaagaatcttttgaagacaccactctttgtt
gtcattgcctgtgccatccaaatgggtgaaaataattttaatccaagcacacaaacagca
cttttctgcacattgtatgacctgatggtgcagaaaaataagtacaagacagaaacaata
acagcaaatcacattaaactgagcataaatcattgtggagacctagccctagatggagta
cttgaccaaaggtttgattttcagtctgaggatttgtccaatatcaaagaagaagtactg
ctggcttcaggtcttctaaataaatacacagctcaaaggctaatgccagtgtatcgattc
tttcataaatcctttcaggaatacactgcaggcaggagactctgcagcctattgacatcc
tccaaggacacagaggtggctagagggtttagttacctacaaaaaatggacaatatttca
gatattacctctacttactgtaatttacttctttatacctgtggatcctctgtagatgct
actagaatagttataaaacatctgacagcagtctatcagcgtggaagtctttttggtctg
ccttcactaagtgatccatctttggaaggagaacctgaaaaggtggaaaatgcagagcag
catgaagttttgcaggcaactaacctgaattcttttgtggaatgtgtcattaacttattt
tatgaaagtcgctcaaaatcatgcttgagtggagaatttgaagaattctttcatggtaag
agactatatattaatactcaaagcatcccaacatacctctttgggttttttaaacactta
cctaattgtgtcagtgcactggaactcattaaattagatttttttggaaattcctcactg
gataacatggaagatgagaacacaagaaatccccaaatttatatccctgaaaaggctgtc
tccttgttcttcaaatggaatcagaaaatcagggctttagagattacactccataatttt
aacaagttaaagaaagatgatattaagtatctaggtaaaatatgctgctctgcctcaagt
ctcagcctgcaaatcaacagaagtgctggcattgcaggaacattgaagaaagtccttgaa
acctgtaagaatatgcaagaccttattgtagaatccacgcctcttaccacagaagatgaa
caacaaatcatagcaatgacaaagctgaaagaaataaatataagagatctgcaaagcaaa
catctagaaggtggacttattgatggaatacacaacctaattaacattgaaaagctcatc
tttgacaatataaagatgaatgagagcgatgctaaaaaattagctgaaggcatcaagctt
ttgaaaaagctgcatttgttgcacttgagtcatttgactgatgttggagatggaatgagg
tgcattgtaagagccatctctgctgaactaggtgatcttgaagaaatccatctagttaat
tgttgtctctctggggatgctgtggaaatattggctcagaatctttgtaatttaccaaaa
ctgaatgtacttgatttatctgaaaattatttgggaaaggatggaaaagttgcagttcac
aaactagctaacagcttgaacatccttccaaacatgaaagtgctgatgcttccttgggga
gatgatgtgaatgtctgcctgagtgatctgctagtgcagctcaaaacaatgccacagctg
acaaaactcagattgaagagatggagccttactgatgttgaggttaaagttctcggtaca
ttttttgagaaaacaccattggaagaccttcagcatttagacttggcaatgaactgtgtg
acaagtaatggctggctttctttcattcaggcactggtaaatctcaacaaattgagattt
ttagactttagcagcaaatgtgacttggtacctgacccactgttaatctgcaaaatgagc
caagtgctaactacactgaattacttaaaagagatacggttgactggctggaagttagat
gaccacgatctgggacttattagtgatgcaaaagtgagctgtggcaaagaatttcagcta
gtgaattcttaa
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integrated database retrieval system
