Crocodylus porosus (Australian saltwater crocodile): 109320418
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Entry
109320418 CDS
T07440
Symbol
BRCA1
Name
(RefSeq) breast cancer type 1 susceptibility protein
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo03440
Homologous recombination
cpoo03460
Fanconi anemia pathway
cpoo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109320418 (BRCA1)
09124 Replication and repair
03440 Homologous recombination
109320418 (BRCA1)
03460 Fanconi anemia pathway
109320418 (BRCA1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cpoo01009
]
109320418 (BRCA1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpoo04121
]
109320418 (BRCA1)
03036 Chromosome and associated proteins [BR:
cpoo03036
]
109320418 (BRCA1)
03400 DNA repair and recombination proteins [BR:
cpoo03400
]
109320418 (BRCA1)
Enzymes [BR:
cpoo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109320418 (BRCA1)
Protein phosphatases and associated proteins [BR:
cpoo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109320418 (BRCA1)
Ubiquitin system [BR:
cpoo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109320418 (BRCA1)
Multi subunit type E3
BRCC complex
109320418 (BRCA1)
Chromosome and associated proteins [BR:
cpoo03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
109320418 (BRCA1)
DNA repair and recombination proteins [BR:
cpoo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
109320418 (BRCA1)
BRCA1-A complex
109320418 (BRCA1)
BRCA1-B complex
109320418 (BRCA1)
BRCA1-C complex
109320418 (BRCA1)
BRCA complex
109320418 (BRCA1)
FA (Fanconi anemia) pathway
Downstream FA components
109320418 (BRCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT_assoc
BRCT
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
zf-RING_UBOX
zf-RING_2
BRCT_2
BRCT_3
zf-C3HC4_3
RING_XB3-XBAT31
zf-Nse
zf-RING_5
zf-RING_6
zf-ANAPC11
zf-RING_10
zf-MIZ
Prok-RING_4
CLP1_P
Zf_2nd_IFT121
U-box
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
109320418
NCBI-ProteinID:
XP_019406054
Ensembl:
ENSCPRG00005008315
LinkDB
All DBs
Position
Unknown
AA seq
1845 aa
AA seq
DB search
MDFSVVALGDVQNVLSAMQKNLECPICLEVIKEPVSTKCDHIFCRFCMFKLLSKKKNSLV
QCPMCKTEVTKRSLQENSRFKQLIEGLLKTIHAFELDAGVKFLNHQDFSKKPIETSSADT
LHKESCVIQSKGYRNRQKKVKENGQENLTLQGAITGVQLSGNMVKWSSPRNKRRKLESDK
IMYIEFGSDSSEDLFKKAGGSRAQDKEMFQTPPEKPEELKYAENESESPHNMQVTNLAGR
EILLSDFRGECDFSEEGLGSSEDIQNISENFQAAQVNLCEEHLKNNLCASASNLHAEPCD
RTANDTSSQKKGSSLFSSAEEMSVVGAQCVSKSEEPGSQHSPKSQSDKNEEASSAVQHVK
TSETCEQKCDSLHEEMSSLEQQLQPEAVPTDTLSQVSKKRLKKSIQKVNDWFSKSSEVLS
CSPQDDGAADIEEGGSCLSDRDSFISEKTDIMVNCLEVAMECENEKSFSKPSVHSIENKI
FGKTYQRDRKSNWRVSLGVVPQNTEVEDVTSDVQHLDNSRTDRSKRKRKTVCGLQPGDFI
KKKDAKVVDEPDCLVAARGKAGEDSSVVGGDPVCEKKGENTSAELPLKKGEFIFKNGVEK
VIGDCTDGKPELKVCDQRNAKKRCSSLTERNRHSARTKHTLQLVVNRNSSSPHQIELQID
SYPSSEESKRIDSEQRQVRRSRRLQLLTGEMTKETRRRDEPNETSRKQANKNESFSSGFQ
RAVLVYAPECKEQVEQQDILNHSIPLSDCNLKGTNLEANKVHATPETSFTIMGIEKDFSN
PSLLQLQEANTCSLLASADTQGSHSLLQLCSTNVEETAGPVLNSPETKQCTATEPDKSKL
HACSPKDNGCYTGYDPESFKNQKMTEAKSILELNTETEDSELDVQYLRNMFRHTKRLSFT
LHSGLVKESAIENTASEAEGKMSTNQIEYRYNSRDLKNDPLHLKNPSVGLTGVSGRESKT
CQTAKDVSGNDTECRHIREHGANASQVQSKEQFLSSARLFGAKIKHKSRLQRRKQSAEKT
VSSEIVRESELNLDLNQYNGSLSDWNNIEEPICQGNGLSIINGTGSSSESNQAEKNEVAE
NKQPVLNVQPESMLNCLAVCQQSPAEFSCKISEKKCSEREGKQVKSDKEQINQVANMWVP
ECLISEEALEQPIEDTSGFPALSETPDDLMFSAEDLKGNNSFCDADRKNISAVFVKTDEN
ALVRDINSDSSSSKSRSQTFVQRSRRAVQKLQFSEEESNEDEDLPCFQELIFGKSSSAHT
QSQKQKMSVRRSSNPSAQILALQSSSSGSDKVVQKMPEATLKEVCVSPSQESECSVNLFS
SQSNMSEDSANRPEDLRLVPSTKEKKNFSEGKEASPHENEELKGRKNALQDEHQGDPNLE
SNIGEPSGYDSEASHLGDSYGLSTQSEILTTQQKNDMQNNLKKLQQEMAVLEAVLEQHGS
QDSELPCSSVEGATATGLIRTARGKQISNENDLSSASLLFTSKSHLLNKEARQHSFPKTL
ALEPNAPSQERKSQQGDAALRLVQEAEEQCNQYRKEPENAMEQKSGTKLNSAAILTSPCG
NMSRIPNSSPLKFLKRPSHSQTAEAMNGSAIPSNIDNRKNTQQCELEKRTLASTHVPHHR
AGKENAKSPVVFSRKKMSIVASGLNQHELLLVQKFAWKTQSTLSNQITEGTTHVIMKTDM
DLVCERTLKYFLGIAGRKWVVSYQWVIQSFKEGRILYESDFEVRGDVINGRNHQGPKRAR
QSQAGKLFKDFEICCYGPFTDMNTENLEWMVELCGASVVTQLHLFTHKAKQAAVVIVQPD
AWVEDTGYRAIQQKCSATVVTREWVLDSVACYERQEFDAYLVSQE
NT seq
5538 nt
NT seq
+upstream
nt +downstream
nt
atggacttctctgtggttgctcttggagatgttcaaaatgtactttcagctatgcagaag
aatttggaatgtccaatatgtttggaagtgataaaagagccagtctcaacaaaatgtgac
cacatattctgcagattctgtatgtttaaacttctcagcaaaaagaaaaacagtctggta
cagtgtccaatgtgtaaaactgaagttaccaaaagaagtcttcaggaaaattccagattt
aagcaactgattgaaggactgttgaaaactatccatgcttttgaacttgatgctggagtg
aagtttttaaaccatcaggatttttctaaaaaacccatagaaaccagttctgctgacacc
ctccataaagaaagttgtgtcatccaaagtaagggctaccgaaacagacaaaaaaaagtt
aaagaaaatggacaagaaaatcttaccctgcagggagctatcactggtgtacagctttca
ggcaacatggttaagtggagttccccaagaaacaaaaggagaaaactggaatctgataaa
ataatgtacattgaatttggttctgattcttctgaagatctctttaaaaaggcaggtggt
agcagggctcaagacaaagaaatgtttcagactccacctgaaaagcctgaagaactgaag
tatgctgagaatgaaagtgaaagtccacacaacatgcaagttaccaacctagctggaaga
gaaatacttctttcagacttcagaggtgaatgtgatttctcagaggaaggcttaggaagc
agtgaagacattcaaaatatcagtgaaaatttccaagctgctcaagtgaatttgtgtgaa
gagcatttaaagaataatctctgcgcttctgcctcaaacttgcatgcagagccatgtgac
agaacagccaatgatacatcatcacagaaaaagggcagtagtttattcagcagtgcagaa
gaaatgagtgtagtgggagctcagtgcgtcagtaaaagtgaagagcctggctcacagcac
agccctaaaagccaatcagataaaaacgaggaagccagtagtgctgtacagcatgtaaaa
acttctgaaacatgtgaacaaaagtgtgactccttacatgaagaaatgtcttctctggag
cagcagctgcagcctgaagctgtgcccactgatactttgagccaagtttctaagaaaaga
ctgaagaaaagcattcagaaagtcaatgattggttttcaaaaagcagtgaggtgctctct
tgttcccctcaggatgatggagcagctgacatagaagagggaggctcatgtttgtcagac
agagattcctttatttcggagaagactgacataatggtaaactgcttggaagttgcaatg
gaatgtgaaaatgaaaagagtttctcaaaacccagtgtgcatagcattgaaaataaaata
tttgggaaaacttatcaaagagatagaaagtcaaattggcgtgttagtcttggagtggta
ccccagaatacagaagtggaagatgttacttctgatgtgcagcacttggataattccaga
actgacagatcaaagcgaaaaagaaagactgtctgtggcctgcaacctggagacttcatc
aagaaaaaagatgcaaaggttgtagatgagcctgattgtcttgttgctgcaaggggaaaa
gctggtgaagattcttctgttgttgggggagatccagtttgtgagaaaaaaggggaaaat
acttcagcagaacttcctctcaagaaaggagaattcatctttaaaaatggtgttgaaaag
gtaattggtgactgcactgatggaaagccagaattaaaggtctgtgaccaaaggaatgct
aaaaaaagatgtagttctctaacggagagaaacagacattcagccagaaccaagcatact
ctacagctggtagtgaacagaaactcaagttctcctcatcagattgagctgcagattgat
agctacccaagtagtgaagaatcaaaacgaattgattctgaacagagacaagttagacgc
agcagaaggcttcagttactgactggagaaatgaccaaagaaaccaggagaagagatgag
ccaaatgagacatcaagaaagcaagccaataaaaatgaaagtttttcttctggattccag
agggctgtcttggtctatgcccctgaatgcaaagaacaggttgaacagcaggatatattg
aaccatagcatacctttgtcagactgtaatttgaaaggtaccaatcttgaagcaaacaag
gtacacgctactcctgaaacctcttttaccattatgggaattgaaaaagatttctcaaat
ccctcactactacaacttcaggaagcaaatacttgttctctgttggccagtgcagacact
caaggcagccactcactcctgcagctatgttccacgaatgttgaggaaactgctggccca
gtactaaactcacctgaaactaagcagtgcacagctacagaacctgacaagagcaagtta
catgcttgttcacccaaggataatggatgttatacaggatatgacccagaaagcttcaaa
aaccaaaagatgactgaagcaaaaagcattttggaattaaacacagaaactgaagatagt
gagctagatgtacagtacctccgtaatatgtttagacatacaaaacgattgtcatttact
cttcattctggtctagtgaaggaatctgcaatagaaaacactgcttctgaagctgaaggg
aagatgagtactaaccagatagaatacagatataacagcagagatttaaaaaatgatcct
ctgcatttaaaaaacccatctgtaggtctgactggagtcagtgggagagagtctaaaacc
tgccaaacagctaaagatgtctctggaaatgatactgaatgcagacacattagggagcat
ggtgcaaatgcttcacaagtacaaagtaaagaacaatttttgtcttcagcgaggttattt
ggtgccaaaattaaacataagagcagattgcaaagaagaaaacaatcagctgaaaagaca
gtgtcctccgaaatagtgagagaaagtgagttaaatttggacctaaaccaatataatgga
agtctaagtgattggaataatatagaagagcccatttgccaaggaaatggtttaagcata
attaacggaacaggctccagttcagaaagcaatcaagcagaaaaaaatgaagtagctgaa
aacaaacagccagtattaaatgttcagcctgaatctatgctgaattgtctagcagtttgt
caacaaagtcctgctgaatttagttgcaaaatctcggaaaagaaatgcagcgagagggaa
ggcaaacaagtaaagagtgataaagaacaaataaatcaagttgccaacatgtgggtacct
gagtgtttaatttcagaagaagctctggagcaacccatagaggacaccagtggttttcca
gcactgtctgagacccctgatgacttaatgttttctgctgaagaccttaaaggtaataac
agcttttgtgatgctgataggaaaaacatttctgctgtgtttgttaaaacagatgagaat
gcactggtaagagacatcaatagtgacagcagtagctctaagtctaggtctcagaccttt
gttcagagatctcgaagagcggtgcagaaactgcagttctctgaagaggagtctaatgag
gatgaagacttgccatgttttcaggaattaatatttggcaagtcatcaagcgcacacact
caatcccaaaaacagaagatgtctgtgagaagatcttcaaatccctcagcacagatttta
gcactgcaaagtagcagcagtggcagtgacaaagttgtacagaagatgcctgaggccacc
ttaaaagaggtgtgtgtttctccaagccaagaatcagaatgctctgttaacttattttct
tcccagtccaacatgtcagaagattcagctaacagaccagaagacttgaggctagtccct
agtaccaaagagaagaaaaacttcagtgaaggcaaagaagctagtccacatgaaaatgaa
gagctgaaaggaagaaaaaatgctttgcaagatgaacaccagggagacccaaatttggaa
tcaaatataggcgagccatctggatatgatagtgaagccagtcatctaggggattcatat
ggattatccactcaaagcgagattcttactacacagcagaaaaatgacatgcaaaacaac
ttaaaaaaacttcagcaggaaatggctgtgcttgaagcagtgctagaacagcatggaagt
caggactctgaattgccatgttccagtgtggaaggagcaactgcaacaggactgataaga
acagcaagaggtaagcagataagcaatgaaaatgatttgtcttcagcttcacttcttttc
acctctaaatctcatttattgaataaggaagctcggcaacatagctttccaaagactctt
gcactggaacccaacgctccttctcaggaaagaaagtcccaacaaggtgatgcggcactg
cggctagtacaagaggcagaggaacagtgtaatcagtacaggaaagaaccagaaaatgca
atggagcagaagtctggaacaaaactaaacagtgctgctatcctcaccagtccttgtgga
aacatgagcaggattccaaacagctcccccttaaagtttcttaaaaggccttcccacagc
caaactgcagaagcaatgaatggttctgccataccttccaatattgataataggaagaat
actcagcaatgtgaactggagaagagaacacttgcctctacacatgttccacaccataga
gctggaaaagaaaatgccaaaagcccagttgtgttcagcaggaaaaaaatgtcaatcgta
gcatcgggtctcaaccagcatgaacttttactggtgcagaagtttgcctggaaaacccag
agcactttatctaatcaaatcactgaaggaacaacccatgtcataatgaaaacagatatg
gatctagtgtgtgagcgtacactaaagtactttttgggcattgcaggaagaaaatgggtg
gttagctatcagtgggttattcagtcttttaaggaaggaagaatactttatgagtctgac
tttgaagtgagaggagatgtgatcaatgggagaaaccaccaaggtcctaagagagctaga
cagtcccaggctggaaagctcttcaaagactttgagatctgctgctacgggcctttcacg
gatatgaacacagaaaatttagagtggatggtagagctttgtggtgcctctgtggtgact
cagcttcatctattcactcataaggcaaaacaagctgcagtagtcattgtgcagccagat
gcttgggtggaagacacaggctacagagcaattcagcagaagtgcagtgctactgtggtg
acccgagagtgggtgttagacagtgttgcatgctatgaacgccaggagtttgatgcctac
cttgtgtcccaggaataa
DBGET
integrated database retrieval system
