Crocodylus porosus (Australian saltwater crocodile): 109320792
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Entry
109320792 CDS
T07440
Symbol
THBS1
Name
(RefSeq) thrombospondin-1
KO
K16857
thrombospondin 1
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo04115
p53 signaling pathway
cpoo04145
Phagocytosis
cpoo04148
Efferocytosis
cpoo04350
TGF-beta signaling pathway
cpoo04510
Focal adhesion
cpoo04512
ECM-receptor interaction
cpoo04518
Integrin signaling
cpoo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
109320792 (THBS1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109320792 (THBS1)
04518 Integrin signaling
109320792 (THBS1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
109320792 (THBS1)
04148 Efferocytosis
109320792 (THBS1)
09143 Cell growth and death
04115 p53 signaling pathway
109320792 (THBS1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
109320792 (THBS1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
109320792 (THBS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpoo04131
]
109320792 (THBS1)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cpoo00536
]
109320792 (THBS1)
Membrane trafficking [BR:
cpoo04131
]
Endocytosis
Phagocytosis
Opsonins
109320792 (THBS1)
Glycosaminoglycan binding proteins [BR:
cpoo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109320792 (THBS1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
VWC2L_2nd
TSP1_ADAMTS
TSP1_CCN
TSP1_CFP_C
Laminin_G_3
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
109320792
NCBI-ProteinID:
XP_019406593
Ensembl:
ENSCPRG00005018763
LinkDB
All DBs
Position
Unknown
AA seq
1011 aa
AA seq
DB search
MGVSSGLVLLLALGICEANRIAESGGDDNSVFDLFELIGITRKAPGRRALGVYLVKGAEI
SSPAYRIEDASRIPAVSDDKFQDLLDAIYAEKGFILLANLRQPKKSRGALLAVERKDGSG
HVFNLVSNGKADTLDLSLSGDGKQQVVSVEDVMLADGHWKNITLFVQEDRAQLYVGCEKM
ENAELDIPIQNIFTRDLATSARLRVAKGGVNDNFQGALQNVRFVFGTTLEAILRNKGCSS
STSAIITLDNPINGSSPAIRTNYIGHKTKDIQAICGFSCDELTNMFVELQGLRSMVTTLQ
DRVRKVTEENEFIAKVAQITPGVCIHNGILHKNKEEWTIDSCTECTCQNSATICRKVSCP
LMPCSNATVPDGECCPRCWPSDYADDGWSPWSEWTSCSVTCGNGIQQRGRSCDSLNNRCE
GSSVQTRTCHLQECDKRFKQDGGWSHWSPWSSCSVTCGMGMITRIRLCNSPVPQLNGKPC
AGEARETKSCQKDPCPINGNWGPWSPWDACTVTCGGGLQKHSRLCNNPEPQYGGKDCVGE
PTGTRVCNKQDCPIGEDNCPNLPNSGQEDYDKDGIGDACDNDDDNDNIPDDRDNCPFIYN
PQQYDYDRDDVGDRCDNCPYNHNPDQTDTDNNGEGDACAVDIDGDGILNEGDNCQYVYNV
DQRDTDLDGVGDQCDNCPMEHNPDQADTDSDRIGDKCDSNQDIDEDGHQNNLDNCPYVPN
ANQADHDKDGKGDACDHDDDNDGIPDDKDNCRLVANPDQVDSDGDGRGDACKDDFDQDNV
PDIDDICPENVDISETDFRRFQMVPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVG
FDEFNAVDFSGTFFINTERDDDYAGFVFGYQSSSRFYVVMWKQITQSYWDSTPTKAQGYS
GLSIKVVNSTTGPGEHLRNALWHTGNTTGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTG
YIRVVMYEGKKIMADSGPIYDKTYAGGRLGLFVFSQEMVFFSDLKYECRDP
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgtccagcggactcgtgctccttctcgcgctgggcatctgtgaggccaaccgg
attgcggagtccgggggagatgataatagcgtgtttgacctctttgagctcattggcatc
actcgtaaggcacctgggcgccgggcactaggggtgtatctggtgaagggagctgagatc
tcaagccctgcctaccgcatcgaggatgccagccgcattcctgctgtctctgatgacaag
ttccaagacctgctggatgccatctatgctgagaagggctttattctgttggccaatctc
cggcagcccaagaagagccgtggcgcactgctggctgtggagcgcaaggatggctctggc
catgtcttcaacctggtatccaatggcaaggcagacaccctggacctgagcctatctggc
gatggcaagcagcaggttgtgtcagtggaggatgtcatgctggctgatgggcactggaag
aatatcaccctgtttgtgcaggaggaccgtgcccagctctatgtagggtgtgagaagatg
gagaatgctgagctggacattcccattcagaatattttcaccagggacctggccaccagt
gccaggctccgtgttgccaaggggggagtcaatgacaacttccagggagcactgcagaat
gtgcgttttgtctttggaacaaccctggaagccatcctgaggaataaaggttgttcaagt
tccactagtgctatcattacattggacaatccaatcaacggctccagtccagctatacgt
accaactatattggccacaaaaccaaggacatccaggccatctgtggcttttcctgtgat
gaactcacaaatatgtttgtggaattgcaaggattacggtctatggttacaactcttcaa
gacagagtgcgcaaggtgacagaagaaaatgaattcattgccaaagtagcccagatcact
cctggagtgtgcattcacaatggaattctgcacaaaaataaagaagagtggactattgac
agctgcactgaatgtacttgccagaactctgccaccatatgccggaaagtgtcatgtcct
ctcatgccttgttccaatgccactgttcctgatggagagtgctgtccacgatgctggcct
agcgactatgcagatgacggttggtctccttggtctgagtggacttcgtgctctgtgacc
tgtggaaatgggattcagcagaggggccgctcttgtgatagtctcaataaccgctgtgaa
ggttcctctgtacagactcggacctgccacctccaggagtgtgataagagatttaaacag
gatggtggttggagccactggtcaccctggtcatcttgttctgttacttgtggcatgggc
atgatcactagaatacgtctctgcaactctccagttccacaattgaatggcaaaccttgt
gcaggtgaagcaagagaaaccaaatcctgccagaaagatccttgtccaataaatggaaac
tggggaccctggtctccgtgggatgcctgtacagtcacatgtggaggaggccttcaaaaa
cacagtcgtctttgcaataaccctgagccccagtatggcgggaaggattgtgtaggtgaa
cccacagggactcgggtatgcaacaaacaggactgtccaattggtgaggataattgtccc
aaccttcccaactctggccaagaagactacgataaagatggaattggcgatgcctgtgac
aatgatgatgataatgataacatcccagatgatagggacaattgcccatttatttacaac
ccacagcaatatgactatgatagggatgatgttggtgaccgttgtgacaattgcccctac
aaccacaaccctgatcagacagacactgataacaatggtgaaggtgatgcatgcgctgtg
gatatcgatggagatggcattctaaatgaaggggacaactgtcaatatgtctacaatgta
gaccagagagatacagatttggatggtgttggagatcagtgtgacaactgtcctatggaa
cacaatccagaccaggcagacacagactctgaccgcataggagataaatgtgacagcaat
caggacatagatgaagatggccatcaaaataaccttgataactgcccctatgtacctaat
gccaatcaagctgaccatgacaaggatggtaaaggtgatgcctgtgaccatgatgatgat
aatgatggtatccctgatgacaaagataactgcagattggttgccaacccagaccaggtg
gactctgatggtgatggtcgtggcgatgcttgtaaagatgactttgaccaagataatgtg
ccagatattgatgacatttgtccagaaaatgttgatatcagtgaaactgatttccgacga
tttcagatggttccccttgatcccaagggaacatcccaaaatgatcccaactgggttgtt
cgtcaccagggtaaagaactggttcagacggtcaactgtgatcctggtcttgcagtgggt
tttgatgaattcaatgctgtagatttcagtggcacattcttcatcaacacggagagggat
gatgactatgctggctttgtatttggttatcagtcaagcagccgtttctacgtagtgatg
tggaagcaaatcacccagtcctactgggactcaacaccaaccaaagctcagggatactct
ggtctttctatcaaagtagtgaattctaccacaggtccaggagagcacctgcgtaatgca
ctgtggcacacaggaaacactactggacaggtgcgaaccttgtggcatgaccctcgtcac
ataggctggaaagattttactgcctacagatggcgtctcagccatagaccaaagactggc
tacattagagttgtaatgtatgaagggaagaaaatcatggctgattcaggaccaatctac
gacaaaacttatgctggtggtcggttaggattatttgtcttttcacaagaaatggtgttc
ttctcagatctcaaatatgaatgcagagatccgtaa
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integrated database retrieval system
