Crocodylus porosus (Australian saltwater crocodile): 109322972
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Entry
109322972 CDS
T07440
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109322972 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpoo03041
]
109322972 (EFTUD2)
Spliceosome [BR:
cpoo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
109322972 (EFTUD2)
Complex C
U5 SnRNP specific factors
109322972 (EFTUD2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
109322972
NCBI-ProteinID:
XP_019409837
Ensembl:
ENSCPRG00005015334
UniProt:
A0A7M4FD16
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDDDDDELGREAKDLDELDDDDDDDDMGDHDEDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFSLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTIVLPDTKGKSFLFNVMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLIL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTYGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTNSSQRSFVEFVLEPLYKILAQVVGDVDTTLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKTKIEHTYTGGIDSDLGEAMSECDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKSLLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIIIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggacacggacctgtacgatgagttcggcaactacatcgggcccgagctcgactcggac
gacgacgacgacgagctgggccgggaggccaaggacctggacgagcttgatgatgatgac
gatgatgacgatatgggagaccatgatgaagatcaccctggaatggaggtggtactgcat
gaggataagaaatattatcccactgcagaagaggtctatgggcctgaggtagagactata
gtgcaggaagaagatacacagcctctcactgagccaataattaaacctgtgaaaaccaaa
aaattctccctgatggagcagacattacctgtcactgtatatgagatggatttcctggca
gatctgatggacaactcggagctgattcgcaatgtgactttgtgtgggcacctccaccat
ggcaagacttgttttgtggattgcttgatagagcagacgcacccagaaataaggaagcgc
tatgatcaggatctttgctacactgatatactgttcaccgagcaagagaggggtgttgga
atcaagagtactccagtgactatcgttttaccagacaccaaagggaaatcttttctcttc
aacgttatggatactcctggccacgtgaacttttctgatgaagttacagctggccttcgt
atttcggatggagttgtgcttttcattgatgcggctgagggggttatgttgaatacagag
aggctgatcaagcatgcagtgcaggagaggctggcagtgactgtgtgcattaataagata
gatcgcctgatcctagaactgaagcttcccccaactgatgcctattacaaacttcgacat
attgtggatgaggtcaatggcttgatcagcatgtattccactgatgagaacctcatcctc
tcccctcttctgggaaatgtctgcttttctagctcccagtacagcatctgttttacactg
ggatcatttgcaaagatttatgcagacacatatggagatatcaattaccaagagtttgcg
aagcggctttggggtgacatctatttcaaccccaagacgcgaaaattcactaaaaaagcc
ccaaccaacagttcacagcgcagctttgtagagttcgtcctagagcctctgtacaagatc
ctggctcaggtggtcggcgatgtagacaccacactccccaggactttggatgagctaggc
attcacctgaccaaggaggagctgaaactgaacattcgacccctgctacgactggtctgc
aaaaaattctttggggagttcacaggatttgtggacatgtgtgtacagcacattccttcc
ccaaaggtgggagccaagaccaaaattgagcacacctacactggaggcattgactcggac
ctgggagaggccatgagcgagtgtgaccctgatggtccgttaatgtgtcacaccacaaaa
atgtacagcacggatgatggggtgcagttccatgcctttggcagggtactgagtgggacc
atccatgcagggcagcctgtcaaggtccttggagaaaactacaccctggaggacgaggag
gattcccagatctgcactgtggggcgcctctggatttcagttgcaaggtaccacatagag
gtgaaccgggtacctgctggcaactgggttctgattgaaggagtggaccagcccattgtg
aagactgcaaccatcacagaacccagaggcaatgaggaggctcagatctttcgtcctttg
aagttcaacaccacgtctgtcatcaaaatagctgtggagccagtcaacccttcggagctc
cctaagatgttggatggtctgcggaaagtcaacaaaagttatccatcgctcaccaccaag
gtggaagaatctggagagcatgtgatcttgggtacaggggagctctacttggactgtgtg
atgcatgatttaaggaagatgtactcagagattgacatcaaagttgctgatccagttgtg
acattttgtgagaccgtggtggaaacatcctccctgaagtgttttgcagagacacccaat
aagaagaacaagatcaccatgattgcggagccactggagaaggggcttgctgaggacatt
gagaatgaggtggtccagatcacatggaacaggaaaaagctaggtgagttcttccagacc
aaatatgactgggatctgctggctgcccgctccatctgggcctttggacctgatgctact
ggcccaaacattttggtagatgacacactgccgtcagaggtggataagtcactgctgggc
tctgtgaaggacagcatcgtgcagggtttccagtgggggactagggaagggcccctctgt
gatgagttgatccgcaatgtgaagtttaagatcctggatgcagtgattgctcaagagcca
ttacaccggggaggtgggcagattatcccgacagccaggagagttgtatactctgctttc
cttatggccaccccacgtctgatggagccatactactttgtggaggttcaggcccctgct
gactgtgtatctgcagtctacactgtcctggccaggcggagaggtcatgtaacccaggac
gctcctatcccaggttcccctctttacaccatcaaagccttcatcccagctattgattca
tttgggtttgaaaccgacttgaggacacacacgcagggacaggccttctcactctctgtc
ttccaccactggcagatcgtgcctggagatcccctggacaagagcatcatcattcgaccc
ctagagccccagccagcacctcacctagcaagagagttcatgatcaagaccaggcgcagg
aagggcttgagcgaggacgtcagcatcagcaagttcttcgacgatcccatgttgctagag
ctggccaagcaggatgttgtcctgaactaccctatgtga
DBGET
integrated database retrieval system
