KEGG   Crocodylus porosus (Australian saltwater crocodile): 109324187
Entry
109324187         CDS       T07440                                 
Symbol
SMNDC1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
cpoo  Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpoo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109324187 (SMNDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cpoo03041]
    109324187 (SMNDC1)
Spliceosome [BR:cpoo03041]
 Complex A
  U2 snRNP components
   U2 related factors
    109324187 (SMNDC1)
 Complex B
    109324187 (SMNDC1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    109324187 (SMNDC1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR DUF2067 TraX-like
Other DBs
NCBI-GeneID: 109324187
NCBI-ProteinID: XP_019411661
LinkDB
Position
Unknown
AA seq 238 aa
MSEDLAKQLASYKAQLQQVEAALSGNADNEDLLKLKKDLQEVIELTKDLLSTQPSETLAS
SDSSASALPSHSWKVGDKCMAIWSEDGQCYEAEIEEIDEENGTAAVTFAGYGNAEVTPLF
NLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQ
FNNRAYSKNKKGQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcggaggacctggccaagcagctggccagctacaaggcgcagctgcagcaagtggag
gcggcgctctcgggcaacgccgacaacgaggacctgctcaagctgaagaaggacttgcag
gaagttattgaacttaccaaagatctgctttcaacacaaccttcagaaacacttgcaagt
tccgacagttctgcttctgccctgcccagccactcctggaaggttggggataaatgtatg
gcaatatggagtgaagatggacagtgttatgaagctgagattgaagagatagatgaggag
aatggtacagctgcagtcacgtttgctggatatggcaacgctgaagtcacccctctgttc
aacctcaaacctgtggaagaaggaagaaaagcaaaagaggacagtggcaacaaacccatg
tccaaaaaagaaatgattgcccagcagcgagaatataagaagaagaaagctttgaaaaaa
gcacagagaatcaaagaacttgaacaggaacgggaggaccagaaagtcaaatggcagcag
ttcaacaacagagcctactctaagaataaaaaaggccaggtcaagaggagtatttttgct
tcccctgagagcgtaactggcaaagttggagttggaacatgtggaattgcagacaaaccc
atgacacagtatcaagatacctctaaatataatgtcaggcatttaatgcctcagtaa

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