Clostridium perfringens SM101: CPR_1279
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Entry
CPR_1279 CDS
T00379
Name
(GenBank) putative tetracycline resistance protein
KO
K08168
MFS transporter, DHA2 family, metal-tetracycline-proton antiporter
Organism
cpr
Clostridium perfringens SM101
Brite
KEGG Orthology (KO) [BR:
cpr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpr02000
]
CPR_1279
01504 Antimicrobial resistance genes [BR:
cpr01504
]
CPR_1279
Transporters [BR:
cpr02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-2 (14 spanner) (DHA2) family [TC:
2.A.1.3
]
CPR_1279
Antimicrobial resistance genes [BR:
cpr01504
]
Gene variants
Tetracycline resistance genes
Transporters
CPR_1279
Gene sets
Vancomycin resistance modules
Tetracycline resistance, efflux pump Tet38 [MD:
M00704
]
CPR_1279
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Motif
Other DBs
NCBI-ProteinID:
ABG86741
UniProt:
Q0STF6
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All DBs
Position
complement(1445426..1446814)
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AA seq
462 aa
AA seq
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MDISLNTLKNVEEVKIKKAVPAVLALMIFALVIDNSFKIISPDLAKAFNISATAVSWQAT
LAGLVIGIGAIVYASLSDSVSVRTLLVLGIILICVGSLLGFIFQKSFLIIVISRIIQSAG
LGSAETLYVIFIAKYFKESEHKKYLGFSTSSYAISQVIGTITGGYISTYLSWQVLFLIPL
LTLVIIPFILKYIPKEKNRAGNVDYIGFILVATVAATLMIFVSGFQWEVLIGFIVALILF
LIYISKNENAFISIKFFTNRNFISVLLVAFVIYSVQLAFIFMFPFLVESIYHYRLDQISL
LLVPSYVLAATVGALSGKVSKKIGSKQCIQMAILGIIVSLIVGALFVKTSVLVFIFVMIL
FSSSFALMYAPMIDTLTRTIPKEKTGTAIGFYNFCLNIATSIGITYVAILMENKYLGKNF
TGLFSDLVAIQYSNVLLVLAVISLVSLLLYWTLIGRREKKAI
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggacatttcacttaatactttaaaaaatgttgaagaagtaaaaataaaaaaagcggta
cctgctgtattggctttaatgatttttgctttagttattgacaactcatttaaaattatt
tcaccagatttggctaaagcttttaacatatcagctactgctgttagttggcaagcaact
ttagctggattagttattggtattggagctattgtatatgcttctttatctgattcagta
agtgttagaactttattggtactaggaattatattaatatgtgttggttcactattagga
tttatttttcagaaatcatttttaattattgttatttcaagaataattcagtcagctgga
ttaggaagtgcagagacattatatgtaatatttatagcaaagtattttaaagagagtgaa
cataaaaaatacttaggatttagtacaagtagttacgctatttcacaggtaattggtaca
attactggaggatatatttcaacatatttaagttggcaagtactatttttaattccatta
ttaactttagtgataataccttttatattaaaatatattcctaaggaaaagaatagagct
ggtaatgtggattatataggatttatattagttgcaacagttgcagcaacattaatgatc
tttgtttcaggattccaatgggaagttttaataggatttatagttgcacttatattattc
cttatatacataagtaaaaatgaaaatgcttttataagcattaaatttttcacaaataga
aactttatatcagtattacttgtagcttttgttatatatagtgtacaacttgcatttata
tttatgtttccattcttagttgaatctatatatcattatagattagaccaaatttcatta
cttttagttccttcatatgttttagctgctactgtaggagctttatcaggaaaggtttct
aagaaaataggaagtaagcaatgtattcaaatggctatattaggtataatagtaagtctt
attgtaggagctttatttgtaaaaacatcagttttagtatttatttttgtaatgatacta
ttctcaagttcatttgctttaatgtatgcacctatgattgatacattaacaagaacaata
cctaaggaaaaaacaggaactgctattggtttctataatttctgtttaaatatagctact
tcaataggaataacatatgtagcaatacttatggaaaataaatatttaggaaagaacttt
actggacttttcagtgacttagtagctatacaatatagtaatgttttattagtattagca
gttatatctttagtatcacttttattatactggactttaattggaagaagagagaaaaag
gcaatataa
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