Collimonas pratensis: CPter91_1346
Help
Entry
CPter91_1346 CDS
T04306
Name
(GenBank) RND transporter, hydrophobe/amphiphile efflux-1 family protein
KO
K18138
multidrug efflux pump
Organism
cpra
Collimonas pratensis
Pathway
cpra01501
beta-Lactam resistance
cpra01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
cpra00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CPter91_1346
01503 Cationic antimicrobial peptide (CAMP) resistance
CPter91_1346
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpra02000
]
CPter91_1346
01504 Antimicrobial resistance genes [BR:
cpra01504
]
CPter91_1346
Transporters [BR:
cpra02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
CPter91_1346
Antimicrobial resistance genes [BR:
cpra01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CPter91_1346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
GDH_ACT2
Motif
Other DBs
NCBI-ProteinID:
AMP03727
UniProt:
A0A127Q132
LinkDB
All DBs
Position
1388607..1391753
Genome browser
AA seq
1048 aa
AA seq
DB search
MAHFFINRPIFAWVLAIVIMLAGAISIVSLSLEQYPDIAPPKVNIRANYAGASAKTLEDS
VTQVIEQQMKGLDNLEYMSASSSSAGRTNITLNFKAGTNPDVAQMQVQNKLQQASSRLPQ
AVQSTGVTVTKAASDTLMIVSLVSADPKVTGVDIGDFISSTLTDQISRVEGVGDVTAYGT
NYAMRIWLDPAKLLKYALMPSDINRALEAQNAEISAGQLGGLPAVQGQQLNATITARSKL
STPEQFRQIIVKAASDGAVVRLQDVARVEIGAESYDVKAQQNGRHSAALAVQLASGANAL
ATSKAVLAKMQELEPYFPPALKLSSTVSYDTTPFVRVSIKEVVKTLLEAIVLVVLIMYLF
LQNLRATFIPAITVPVVLLGTFGILSLFGYSINTLTMFGMVLAIGLLVDDAIVVVENVER
LMAEQALSAKEATRKAMSEVSGALVGIALVLSGVFIPMAFFGGSTGVIYRQFSITIVSAM
TLSVLVALTLTPALCATMLKPHTHGQMPQKGFFGWFNRTFERNARRYQSGVAGILGRGRR
SLLTYVLIVAAMAVCLMRLPTSFLPDEDQGVLNAQVQLPVGATEEQTTQVMRTVQQYFLK
QPEVIDALLSITGSGSGGNSQNVGRAFIKLQDWDKRKEKSQGAAEIARRANRDLAKIRDA
RIFVTLPPAVRGLGQSSGFDVQMKDVGGVGHDALMQARDEFIALAGKSDKLANVRTTGLD
DTPQFRVEIDDSKAGALSLSTADINSTMSTAMGGTYVNDFLNNGRVKRVYVQGDSASRMQ
AHDLEQWHVRNAASQMVPFSAFTSASWTYGPSLLERYNGVSSFEIVGEPAPGVSSGVAMQ
EVERIMAQMPAGIGYEWTGQSYQERLSGSQAPLLYAASILFVFLCLAALYESWSVPFAVI
LIVPLGIIGTVLLTSASGLSNDVYFQVGLLTTVGLSCKNAILIVEFAKQLHESGKSLLDA
TLEAVHLRLRPILMTSLAFMFGVLPLALASGAGSASRRAIGTGVLGGTISATLLGIFFTP
LFYYLICRLMQKRRSQAPASAEAQKAGE
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atggcgcatttctttatcaatcgtcccatctttgcctgggtcctggccatcgtcatcatg
ctggccggtgcgatttccatcgtctcgctgtcgctggagcagtatcccgacatcgctccg
cccaaggtcaacatccgcgccaactatgccggcgcctcagccaagacgctggaagattcg
gtcacgcaggtgatcgaacagcaaatgaaagggctggacaacctggaatacatgtcggcc
tccagcagttctgccggccgcaccaacatcaccctgaatttcaaggccggcaccaatccg
gacgtggcgcagatgcaggtgcagaacaagctgcagcaagccagttcgcgcctgccgcaa
gcggtgcaaagcaccggcgtgacggtgaccaaggccgccagcgacaccttgatgatcgta
tcgctggtctcggctgatcccaaggtcaccggggtggatatcggcgatttcatcagcagc
accttgaccgaccagatcagccgggtggaaggcgtcggcgacgttaccgcctatggcacc
aactacgcgatgcgcatctggctcgatcccgctaagctgctgaagtatgcgctgatgccg
tccgacatcaaccgtgcgctggaagcccagaatgcggaaatttcggccggccagctgggc
ggcttgccggccgtccaggggcagcagctgaacgctaccattactgcccgcagcaagctc
agtacgccggagcagtttcgccagattatcgtgaaagcagccagcgatggcgccgtggtg
cggctgcaggacgtagcgcgggtggaaatcggcgcggaaagctacgacgtcaaggcccag
cagaacggtcggcattcggctgcgctggcggtgcagctggcgtctggcgccaacgccctg
gccacctccaaggcggtgctggccaaaatgcaggagctggagccgtatttcccgccggcg
ctgaagctcagcagcacggtcagctatgacaccacgccattcgtgcgggtctccatcaag
gaagtggtcaaaaccctgctggaagctatcgtgctggtggtgctgatcatgtacctgttc
ctgcaaaacctgcgcgccacctttatcccggccatcacggtaccggtggtcttgctcggc
accttcggcatcctttctctgttcggctattcgatcaataccttgaccatgttcggcatg
gtgctggccatcggcctgttggtcgacgacgccatcgtggtggtggaaaacgtcgaacgc
ctgatggcggagcaggcgctcagcgccaaggaagcgacgcgcaaggccatgtccgaggtc
agcggtgcgctggtcggcattgcgctggtgctgtccggcgtgttcattccgatggcgttt
ttcggcggttccaccggcgtgatctatcgccagttttccatcaccatcgtgtcggccatg
acgctgtcggtgctggttgccctgaccctgacgcccgccctgtgcgccaccatgctcaag
ccgcacacccatggccagatgccgcagaagggcttcttcggctggttcaaccgcactttt
gagcgcaatgcacggcgttaccagtccggtgtcgccgggatactggggcgcggccgccgc
agcctgctcacctacgtgctgattgtcgcggcgatggcggtctgcctgatgcgcttgcct
acctctttcctgccggatgaagaccagggcgtgctgaacgcccaggtccagctgccggtg
ggcgccaccgaggagcagaccacgcaggtcatgcgcaccgtgcaacagtatttcctgaag
cagccggaagtgatcgacgccttgctgtcgattaccggctccggctctggcggcaatagc
cagaacgtcggacgcgctttcatcaagctgcaggattgggacaaacgcaaggaaaaatct
cagggtgcggccgagattgcgcgccgcgccaaccgggatctggcgaagatacgcgacgcc
aggatttttgtgaccttgccgccggcggtgcgcggcctcggccagagttccggcttcgat
gtacagatgaaggatgtcggcggcgtcggccatgacgcgctgatgcaggcgcgcgacgag
ttcatcgccttggccggcaagagcgacaagctggccaacgtgcgcaccaccggcctcgac
gatacgccgcagttccgcgtcgagatcgacgacagcaaggccggtgcactgagcctgagc
acggcggacatcaattccaccatgtcgaccgcgatgggcggcacttatgtcaacgacttc
ctcaacaatggccgcgtcaagcgcgtctacgtgcagggcgattcagcgtcgcgcatgcag
gcgcatgacctggagcagtggcacgtgcgcaatgccgccagccagatggtgccgttttct
gccttcaccagcgccagctggacttacgggccatccctgctggaacgttacaacggcgtc
tcgtcgtttgaaattgtcggcgaaccggcgccaggcgtcagttctggcgtggcgatgcag
gaagtggaacgcatcatggcgcaaatgccggccgggataggctatgaatggaccggccag
tcctatcaggaacgtttgtccggctcacaagcgccattgctgtatgcggcatccatcctg
ttcgtcttcctctgcctggcggcgctgtatgaaagctggtcggtgccgttcgcggtgatc
ctgatcgtgccgctggggatcatcggcaccgtgctgctgacctcggccagcggcttgtcc
aacgatgtctatttccaggtcgggctgctgaccacggtcggtttgtcctgcaagaacgcg
atcctgattgtcgagttcgccaagcagctgcacgaatccggaaaatccttgctggacgca
acactggaagcggtgcatctgcgcctgcggccgatcctgatgacttcgctggcgttcatg
ttcggcgtgctgccgctggcgcttgccagcggcgccggatctgccagccggcgcgccatc
ggcaccggcgtgctgggcgggaccatatcggcaacgctgctggggattttctttacgccc
ctgttttattatctgatctgccgcctgatgcagaagcgccgtagccaagcgccggcgtcg
gcagaagcacaaaaggcgggtgaatga
DBGET
integrated database retrieval system
