Entry |
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Name |
(GenBank) radical SAM domain protein
|
KO |
|
Organism |
cps Colwellia psychrerythraea
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Pathway |
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Module |
cps_M00988 | PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine |
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Brite |
KEGG Orthology (KO) [BR:cps00001]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
CPS_2883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:cps03016]
CPS_2883
Enzymes [BR:cps01000]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
CPS_2883
Transfer RNA biogenesis [BR:cps03016]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
CPS_2883
|
SSDB |
|
Motif |
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Other DBs |
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LinkDB |
|
Position |
complement(3018684..3019352)
|
AA seq |
222 aa
MNYKINELFETIQGEGSFTGQPSIFIRLQGCPVGCSWCDTKHTWDIELDDQVSPDIMLAK
KAETSQWANFSAEDILALVKEKHFKAKHIVITGGEPCMVDLTPLCETFEDLGYSTQIETS
GTFEIITTEKCWVTVSPKIKMRGGYDILASAMSRANEIKHPVATEQNVDDLKELLAMHQV
ENTPVYLQPISQKKRATELAIATCIANNWRLSVQVHKYIGIE |
NT seq |
669 nt +upstreamnt +downstreamnt
atgaactataaaattaatgagctttttgaaaccattcaaggggagggctccttcacgggc
cagccgtcaattttcattcgactacaaggttgtcctgtcggatgttcgtggtgtgatact
aaacatacttgggatatagaactagacgaccaagtcagccctgacattatgttagctaaa
aaagctgagacttctcagtgggctaatttttcggctgaagatattctagcgttagtgaag
gaaaagcattttaaagcaaagcatattgttatcactggcggtgaaccttgtatggttgac
ctaacgccactttgtgaaacctttgaagacctaggttatagcacgcaaattgaaacatct
ggtacctttgaaattattaccacagaaaaatgctgggtaaccgtatctcctaaaatcaag
atgcgcggtggttatgatattttagcaagcgctatgtcacgtgctaatgaaataaagcac
cccgttgctacagagcaaaatgtagatgatttaaaagagctattggcaatgcatcaggtt
gaaaataccccggtatatctacaaccaattagccaaaagaagcgcgcaaccgagttagca
atagcaacatgtatagctaacaattggcgcttatcggtgcaagttcacaaatatattggt
atcgaataa |