Colwellia psychrerythraea: CPS_2883
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Entry
CPS_2883 CDS
T00258
Name
(GenBank) radical SAM domain protein
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
cps
Colwellia psychrerythraea
Pathway
cps00790
Folate biosynthesis
cps01100
Metabolic pathways
Module
cps_M00988
PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Brite
KEGG Orthology (KO) [BR:
cps00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
CPS_2883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cps03016
]
CPS_2883
Enzymes [BR:
cps01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
CPS_2883
Transfer RNA biogenesis [BR:
cps03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
CPS_2883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
AAZ27071
UniProt:
Q480D1
LinkDB
All DBs
Position
complement(3018684..3019352)
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AA seq
222 aa
AA seq
DB search
MNYKINELFETIQGEGSFTGQPSIFIRLQGCPVGCSWCDTKHTWDIELDDQVSPDIMLAK
KAETSQWANFSAEDILALVKEKHFKAKHIVITGGEPCMVDLTPLCETFEDLGYSTQIETS
GTFEIITTEKCWVTVSPKIKMRGGYDILASAMSRANEIKHPVATEQNVDDLKELLAMHQV
ENTPVYLQPISQKKRATELAIATCIANNWRLSVQVHKYIGIE
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgaactataaaattaatgagctttttgaaaccattcaaggggagggctccttcacgggc
cagccgtcaattttcattcgactacaaggttgtcctgtcggatgttcgtggtgtgatact
aaacatacttgggatatagaactagacgaccaagtcagccctgacattatgttagctaaa
aaagctgagacttctcagtgggctaatttttcggctgaagatattctagcgttagtgaag
gaaaagcattttaaagcaaagcatattgttatcactggcggtgaaccttgtatggttgac
ctaacgccactttgtgaaacctttgaagacctaggttatagcacgcaaattgaaacatct
ggtacctttgaaattattaccacagaaaaatgctgggtaaccgtatctcctaaaatcaag
atgcgcggtggttatgatattttagcaagcgctatgtcacgtgctaatgaaataaagcac
cccgttgctacagagcaaaatgtagatgatttaaaagagctattggcaatgcatcaggtt
gaaaataccccggtatatctacaaccaattagccaaaagaagcgcgcaaccgagttagca
atagcaacatgtatagctaacaattggcgcttatcggtgcaagttcacaaatatattggt
atcgaataa
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