Chlamydia psittaci 84/55: B595_0714
Help
Entry
B595_0714 CDS
T02308
Symbol
ligA
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
cpsb
Chlamydia psittaci 84/55
Pathway
cpsb03030
DNA replication
cpsb03410
Base excision repair
cpsb03420
Nucleotide excision repair
cpsb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpsb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B595_0714 (ligA)
03410 Base excision repair
B595_0714 (ligA)
03420 Nucleotide excision repair
B595_0714 (ligA)
03430 Mismatch repair
B595_0714 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpsb03032
]
B595_0714 (ligA)
03400 DNA repair and recombination proteins [BR:
cpsb03400
]
B595_0714 (ligA)
Enzymes [BR:
cpsb01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
B595_0714 (ligA)
DNA replication proteins [BR:
cpsb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
B595_0714 (ligA)
DNA repair and recombination proteins [BR:
cpsb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
B595_0714 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B595_0714 (ligA)
MMR (mismatch excision repair)
DNA ligase
B595_0714 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
B595_0714 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
HHH
HHH_3
PTCB-BRCT
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
AFS19674
LinkDB
All DBs
Position
complement(699554..701575)
Genome browser
AA seq
673 aa
AA seq
DB search
MASAAQKELSKYCMQSTYSREQYLSLCKDIEEDDYRYYVLHNPTISDYDYDMKMRQLLSI
EAQHPEWKVLWSPSMRLGDRASGSFPIVAHAHPMLSIANAYTLEELYEFFSRMEKALGYT
PKYTLEIKIDGIAVALRYEQRVLLQALSRGNGRKGEDITANIRTIRTLPLRLSKEAPEFL
EVRGEVFFSRATFRQINAAQRQAEKPEFANPRNAAGGTLKLLSAKEAAQRNLEISIYGSL
AEENKRSHYENLLLCREWGFPVLGQPRQCQTIDEVVASLHEIEALRDQLPMEIDGVVIKV
DDIEDQKVLGMTAKHYRWALAYKYAPERAETILEDILVQVGRTGVLTPVAKLRPVVLSGS
RVSRASLYNEDEIERKDIRIGDTVYVEKGGEIIPQVVGVCLEKRPEGSQPWVMPEYCPVC
HGKVTRESDKVSVRCTNPLCSAGVIEKIRFFCGRDALDIDHLGEKVVTKLFDLGCIHRRC
DIFQITEEDLRHVPGFKDKSIRNVLKSIEKAKSVPLDRFLTALGIPYVGIGGANALAQHF
LSLESVMSASLDDLKSVEGIGDKVAESIVAYFNQPEHREEIQIMLSLGVHVLPYRRESSS
CLGKTFVITGSLEKLTRSEAETYIRNCGGKVGSSVSKNTDYLVVGKDPGSKLQKAQELEI
PILSEDELLKILY
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgctgcgcaaaaggagttaagtaaatactgcatgcaaagtacatattccaga
gaacaatatctctctctgtgtaaagatatcgaagaagatgattatcgctattatgttctt
cataatcccacaatctcagattatgactatgatatgaaaatgcggcagcttctttctata
gaagcgcagcatcctgaatggaaggtattatggtctccatcgatgcgtcttggggatcga
gcttcaggaagctttcctattgtagctcatgcccaccccatgctttctattgctaatgcc
tatactttagaagagctttatgagttcttttcccgtatggagaaagcgttggggtatacc
ccgaaatacactctagaaataaaaatagatggtattgccgtagctcttcgttatgagcag
agagtccttttacaagctttaagccgtgggaatggacgtaagggagaggatatcacagca
aatatccgtacgatacgcacgcttcccctacgtttatcaaaagaggctccagaatttcta
gaagttcgaggtgaagtatttttttcacgagcaacttttcgtcagattaatgcggcacaa
aggcaagcggagaaacctgaatttgctaatccaagaaatgctgctggtggcactttgaaa
ttgttgtctgctaaggaagcagcacaaagaaacttagaaatttctatttatggatcgttg
gcagaagagaataagcgatcacattatgagaatctcctgttgtgtagagagtggggattc
cccgtattgggtcagccacgtcaatgccaaactatcgatgaagtcgtcgcctctctccat
gagatagaagctttgcgagatcaacttcccatggaaatcgatggtgtggtgatcaaagta
gatgatatagaagatcaaaaagtcttgggaatgacggcgaagcattatcgctgggcactc
gcatacaagtatgcgccagaacgcgctgaaactattttagaagatatcttagttcaagta
ggcagaacgggagtattgaccccagtggctaagctgcgacctgtagttttgtcaggatct
agagtttctagggcttctctatacaatgaagatgaaattgagagaaaagacatccgtata
ggtgacaccgtatatgtagagaagggcggagaaattattcctcaagttgttggtgtttgc
ctggaaaagcgtccggaaggctcacagccttgggttatgcccgaatactgtcctgtgtgt
catgggaaggtaactcgcgaatccgataaagtttctgttcgttgtacgaaccccctgtgt
tctgcaggagttattgaaaaaatccgctttttttgtggaagagacgctttagatattgat
catcttggtgaaaaggttgttacgaagctatttgatttagggtgtattcatcgacgctgt
gatatttttcaaatcactgaagaagatctccgccatgttccaggatttaaagataaatcc
ataagaaacgtccttaaaagtatagagaaagctaaaagtgtgcctttagatcgttttctt
actgctttgggtattccttatgtgggtataggcggagccaacgctcttgcacaacatttt
ctttctttagagtctgtgatgtctgcctctttggatgatctaaaatctgtagagggaatt
ggagataaagttgcagaatctatagttgcttattttaatcaaccagaacatcgcgaagag
attcaaataatgctttctctaggggtgcatgttttaccttaccgcagggaaagttcttcg
tgtttagggaaaaccttcgtaattacgggcagtcttgaaaaattgacgagatccgaagca
gaaacttacattcgcaattgtggaggtaaggtaggttcttccgtgtctaaaaacaccgac
tatcttgttgtgggcaaggatcctgggtccaagttacaaaaggcccaagaactggaaatt
cccattcttagtgaggatgagctgttaaaaattctttactaa
DBGET
integrated database retrieval system