Chlamydia psittaci CP3: B711_0713
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Entry
B711_0713 CDS
T02251
Symbol
ligA
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
cpsc
Chlamydia psittaci CP3
Pathway
cpsc03030
DNA replication
cpsc03410
Base excision repair
cpsc03420
Nucleotide excision repair
cpsc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B711_0713 (ligA)
03410 Base excision repair
B711_0713 (ligA)
03420 Nucleotide excision repair
B711_0713 (ligA)
03430 Mismatch repair
B711_0713 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpsc03032
]
B711_0713 (ligA)
03400 DNA repair and recombination proteins [BR:
cpsc03400
]
B711_0713 (ligA)
Enzymes [BR:
cpsc01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
B711_0713 (ligA)
DNA replication proteins [BR:
cpsc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
B711_0713 (ligA)
DNA repair and recombination proteins [BR:
cpsc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
B711_0713 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B711_0713 (ligA)
MMR (mismatch excision repair)
DNA ligase
B711_0713 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
B711_0713 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
HHH
PTCB-BRCT
HHH_3
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
AFS27107
LinkDB
All DBs
Position
complement(699411..701432)
Genome browser
AA seq
673 aa
AA seq
DB search
MASAAQKELSKYCMQSTYSREQYLSLCKDIEEDDYRYYVLHNPTISDYDYDMKMRQLLSI
EAQHPEWKVLWSPSMRLGDRASGSFPIVAHAHPMLSIANAYTLEELYEFFSRMEKALGYT
PKYTLEIKIDGIAVALRYEQRVLVQALSRGNGRKGEDITANIRTIRTLPLRLSKEAPEFL
EVRGEVFFSRATFRQINAAQRQAEKPEFANPRNAAGGTLKLLSAKEAAQRNLEISIYGSL
AEENKRSHYESLLLCREWGFPVLGQPRQCQTIDEVVASLHEIEALRDQLPMEIDGVVIKV
DDIEDQKVLGMTAKHYRWALAYKYAPERAETILEDILVQVGRTGVLTPVAKLRPVVLSGS
RVSRASLYNEDEIERKDIRIGDTVYVEKGGEIIPQVVGVCLEKRPEGSQPWVMPEYCPVC
HGKVTRESDKVSVRCTNPLCSAGVIEKIRFFCGRDALDIDHLGEKVVTKLFDLGCIHRRC
DIFQITEEDLRHVPGFKDKSIRNVLKSIEKAKSVPLDRFLTALGIPYVGIGGANALAQHF
LSLESVMSASLDDLKSVEGIGDKVAESTVAYFNQPEHREEIQIMLSLGVHVLPYRRESSS
CLGKTFVITGSLEKLTRSEAETYIRNCGGKVGSSVSKNTDYLVVGKDPGSKLQKAQELEI
PILSEDELLKILY
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgctgcgcaaaaggagttaagtaaatactgcatgcaaagtacatattccaga
gaacaatatctctctctgtgtaaagatatcgaagaagatgattatcgctattatgttctt
cataatcccacaatctcagattatgactatgatatgaaaatgcggcagcttctttctata
gaagcgcagcatcctgaatggaaggtattatggtctccatcgatgcgtcttggggatcga
gcttcaggaagctttcctattgtagctcatgcccaccccatgctttctattgctaatgcc
tatactttagaagagctttatgagttcttttcccgtatggagaaagcgttggggtatacc
ccgaaatacactctagaaataaaaatagatggtattgccgtagctcttcgttatgagcag
agagtccttgtacaagctttaagccgtgggaatggacgtaagggagaggatatcacagca
aatatccgtacgatacgcacgcttcccctacgtttatcaaaagaggctccagaatttcta
gaagttcgaggtgaagtatttttttcacgagcaacttttcgtcagattaatgcggcacaa
aggcaagcggagaaacctgaatttgctaatccaagaaatgctgctggtggcactttgaaa
ttgttgtctgctaaggaagcagcacaaagaaacttagaaatttctatttatggatcgttg
gcagaagagaataagcgatcacattatgagagtctcctgttgtgtagagagtggggattc
cccgtattgggtcagccacgtcaatgccaaactatcgatgaagtcgtcgcctctctccat
gagatagaagctttgcgagatcaacttcccatggaaatcgatggtgtggtgatcaaagta
gatgatatagaagatcaaaaagtcttgggaatgacggcgaagcattatcgctgggcactc
gcatacaagtatgcgccagaacgcgctgaaactattttagaagatatcttagttcaagta
ggcagaacgggagtattgaccccagtggctaagctgcgacctgtagttttgtcaggatct
agagtttctagggcttctctatacaatgaagatgaaattgagagaaaagacatccgtata
ggtgacactgtatatgtagagaagggcggagaaattattcctcaagttgttggtgtttgc
ctagaaaagcgtccggaaggctcacagccttgggttatgcccgaatactgtcctgtgtgt
catgggaaggtaactcgcgaatccgataaagtttctgttcgttgtacgaaccccctgtgt
tctgcaggagttattgaaaaaatccgctttttttgtggaagagacgctttagatattgat
catcttggtgaaaaggttgttacgaagctatttgatttagggtgtattcatcgacgctgt
gatatttttcaaatcactgaagaagatctccgccatgttccaggatttaaagataaatcc
ataagaaacgtccttaaaagtatagagaaagctaaaagtgtgcctttagatcgttttctt
actgctttgggtattccttatgtgggtataggcggagccaacgctcttgcacaacatttt
ctttctttagagtctgtgatgtctgcctctttggatgatctaaaatctgtagagggaatt
ggagataaagttgcagaatctacagttgcttattttaatcaaccagaacatcgcgaagag
attcaaataatgctttctctaggggtgcatgttttaccttaccgcagggaaagttcttcg
tgtttagggaaaaccttcgtaattacgggcagtcttgaaaaattgacgagatccgaagca
gaaacttacattcgcaattgtggaggtaaggtaggttcttccgtgtctaaaaacaccgac
tatcttgttgtgggcaaggatcctgggtccaagttacaaaaggcccaagaactggaaatt
cccattcttagtgaggatgagctgttaaaaattctttactaa
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