Chlamydia psittaci VS225: B600_0707
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Entry
B600_0707 CDS
T02312
Symbol
ligA
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
cpsv
Chlamydia psittaci VS225
Pathway
cpsv03030
DNA replication
cpsv03410
Base excision repair
cpsv03420
Nucleotide excision repair
cpsv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpsv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B600_0707 (ligA)
03410 Base excision repair
B600_0707 (ligA)
03420 Nucleotide excision repair
B600_0707 (ligA)
03430 Mismatch repair
B600_0707 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpsv03032
]
B600_0707 (ligA)
03400 DNA repair and recombination proteins [BR:
cpsv03400
]
B600_0707 (ligA)
Enzymes [BR:
cpsv01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
B600_0707 (ligA)
DNA replication proteins [BR:
cpsv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
B600_0707 (ligA)
DNA repair and recombination proteins [BR:
cpsv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
B600_0707 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B600_0707 (ligA)
MMR (mismatch excision repair)
DNA ligase
B600_0707 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
B600_0707 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_OB
DNA_ligase_aden
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
HHH
HHH_3
PTCB-BRCT
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
AFS22858
LinkDB
All DBs
Position
complement(691122..692489)
Genome browser
AA seq
455 aa
AA seq
DB search
MKLLSAKEAAQRNLEISIYGSLAEENKRSHYENLLLCREWGFPVLGQPRQCQTIDEVVAS
LHEIEALRDQLPMEIDGVVIKVDDIEDQKVLGMTAKHYRWALAYKYAPERAETILEDILV
QVGRTGVLTPVAKLRPVVLSGSRVSRASLYNEDEIERKDIRIGDTVYVEKGGEIIPQVVG
VCLEKRPEGSQPWVMPEYCPVCHGKVTRESDKVSVRCTNPLCSAGVIEKIRFFCGRDALD
IDHLGEKVVTKLFDLGCIHRRCDIFQITEEDLRHVPGFKDKSIRNVLKSIEKAKSVPLDR
FLTALGIPYVGIGGANALAQHFLSLESVMSASLDDLKSVEGIGDKVAESIVAYFNQPEHR
EEIQIMLSLGVHVLPYRRESSSCLGKTFVITGSLEKLTRSEAETYIRNCGGKVGSSVSKN
TDYLVVGKDPGSKLQKAQELEIPILSEDELLKILY
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
ttgaaattgttgtctgctaaggaagcagcacaaagaaacttagaaatttctatttatgga
tcgttggcagaagagaataagcgatcacattatgagaatctcctgttgtgtagagagtgg
ggattccccgtattgggtcagccacgtcaatgccaaactatcgatgaagtcgtcgcctct
ctccatgagatagaagctttgcgagatcaacttcccatggaaatcgatggtgtggtgatc
aaagtagatgatatagaagatcaaaaagtcttgggaatgacggcgaagcattatcgctgg
gcactcgcatacaagtatgcgccagaacgcgctgaaactattttagaagatatcttagtt
caagtaggcagaacgggagtattgaccccagtggctaagctgcgacctgtagttttgtca
ggatctagagtttctagggcttctctatacaatgaagatgaaattgagagaaaagacatc
cgtataggtgacaccgtatatgtagagaagggcggagaaattattcctcaagttgttggt
gtttgcctggaaaagcgtccggaaggctcacagccttgggttatgcccgaatactgtcct
gtgtgtcatgggaaggtaactcgcgaatccgataaagtttctgttcgttgtacgaacccc
ctgtgttctgcaggagttattgaaaaaatccgctttttttgtggaagagacgctttagat
attgatcatcttggtgaaaaggttgttacgaagctatttgatttagggtgtattcatcga
cgctgtgatatttttcaaatcactgaagaagatctccgccatgttccaggatttaaagat
aaatccataagaaacgtccttaaaagtatagagaaagctaaaagtgtgcctttagatcgt
tttcttactgctttgggtattccttatgtgggtataggcggagccaacgctcttgcacaa
cattttctttctttagagtctgtgatgtctgcctctttggatgatctaaaatctgtagag
ggaattggagataaagttgcagaatctatagttgcttattttaatcaaccagaacatcgc
gaagagattcaaataatgctttctctaggggtgcatgttttaccttaccgcagggaaagt
tcttcgtgtttagggaaaaccttcgtaattacgggcagtcttgaaaaattgacgagatcc
gaagcagaaacttacattcgcaattgtggaggtaaggtaggttcttccgtgtctaaaaac
accgactatcttgttgtgggcaaggatcctgggtccaagttacaaaaggcccaagaactg
gaaattcccattcttagtgaggatgagctgttaaaaattctttactaa
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