Chiloscyllium punctatum (brownbanded bambooshark): 140455006
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Entry
140455006 CDS
T11285
Name
(RefSeq) tumor necrosis factor-like
KO
K03156
tumor necrosis factor superfamily, member 2
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun04010
MAPK signaling pathway
cpun04060
Cytokine-cytokine receptor interaction
cpun04150
mTOR signaling pathway
cpun04210
Apoptosis
cpun04217
Necroptosis
cpun04350
TGF-beta signaling pathway
cpun04620
Toll-like receptor signaling pathway
cpun04621
NOD-like receptor signaling pathway
cpun04622
RIG-I-like receptor signaling pathway
cpun04625
C-type lectin receptor signaling pathway
cpun04920
Adipocytokine signaling pathway
cpun05132
Salmonella infection
cpun05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
140455006
04350 TGF-beta signaling pathway
140455006
04150 mTOR signaling pathway
140455006
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
140455006
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
140455006
04217 Necroptosis
140455006
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
140455006
04621 NOD-like receptor signaling pathway
140455006
04622 RIG-I-like receptor signaling pathway
140455006
04625 C-type lectin receptor signaling pathway
140455006
09152 Endocrine system
04920 Adipocytokine signaling pathway
140455006
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
140455006
09171 Infectious disease: bacterial
05132 Salmonella infection
140455006
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cpun04052
]
140455006
00536 Glycosaminoglycan binding proteins [BR:
cpun00536
]
140455006
Cytokines and neuropeptides [BR:
cpun04052
]
Cytokines
Tumor necrosis fators
140455006
Glycosaminoglycan binding proteins [BR:
cpun00536
]
Heparan sulfate / Heparin
Cytokines
140455006
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Haem_bd
Motif
Other DBs
NCBI-GeneID:
140455006
NCBI-ProteinID:
XP_072405784
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All DBs
Position
30:complement(20323812..20327224)
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AA seq
238 aa
AA seq
DB search
MDTEAKFLELENGGLLPIRESGSNTSCFWRALCTLAVLGLLLLSTFLFLLQFGVFPSNQD
SGLKLEVSHPSLTTAAQTSGLPLLMKQVGSDPRPRIAAHLTASPTSKGGTVIWQNESDST
FTEGLEFRDNRLIIKRPGQYFVYTQVVFHSMECQPQAVYLSHELTKLSPSYPEESILLKA
TKSACHSHQRKEPWYKTSYQGAIFEFLEGDQIFSRVNKETTGYVDTTEGKTFFGIFAV
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggacactgaggccaagttcttggagctggagaatggggggctgctgcccatcagggag
tcaggctccaacacaagctgtttctggcgggctctgtgtacactcgctgtcctcggcttg
ttgctgctatcgacctttctcttcctgcttcagtttggagtgttcccttcaaaccaggat
tcaggattaaagttggaagtctcccatccctcactgacaacagctgctcagaccagtggt
ttgccccttctcatgaagcaggtggggagtgacccccggccgagaatcgcagctcacctg
acagcttccccaaccagcaaaggagggaccgtgatttggcaaaatgagagtgattccacc
ttcaccgagggcctggagttcagggacaacaggctcatcatcaagaggcctggacagtac
tttgtctacacccaggtggtcttccacagcatggagtgtcagccccaggctgtctacctg
agccacgaactcaccaagctgtcgccaagttaccccgaggaatccattctactgaaagcc
accaaatccgcctgccactctcaccaacgcaaggagccctggtacaaaacctcctaccag
ggagccatctttgagttcctggagggagatcagatcttctccagggttaacaaggagaca
acgggatatgtagacacaaccgaagggaagactttctttggaatatttgctgtgtaa
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