Chiloscyllium punctatum (brownbanded bambooshark): 140463978
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Entry
140463978 CDS
T11285
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe-like isoform X1
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun00514
Other types of O-glycan biosynthesis
cpun04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
140463978
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
140463978
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cpun01003
]
140463978
Enzymes [BR:
cpun01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
140463978
Glycosyltransferases [BR:
cpun01003
]
Glycan extension
O-Glycan
140463978
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
140463978
NCBI-ProteinID:
XP_072414629
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Position
39:41798692..41852522
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AA seq
415 aa
AA seq
DB search
MRLRSSANSKLCFLLSLTLCASLLLLMGLQQWGPSDLQLSRSLQPFRQTPRTLGNATADR
SLCKEERRSGAASAGSSTADSSSAFKREDSRHQVAKSDKVLRTYTKAKGLQDFAKNSTVK
DQRGPGPWEKAAALPWDIAPHNKHNMQLSDIFIAVKTTRKYHKARLDLLYQTWISLVKEQ
TFIFTDGEDKELQAKAGDRMINTNCSAAHTRQALCCKMSVEYDKFIESKKKWFCHVDDDN
YVNIRSLVFLLSAYSHTQDVYIGRPSLDHPVEAVERVKSDGSTTVKFWFATGGAGFCISR
GLALKMSPWASFGNFISTAEKIRLPDDCTIGYIIEGLLEVKMIHSDLFHSHLENLQQIPP
TVIPRQVTLSYGSLEMKRNVLRVQGPFTLADDPSRFKSIHCLLYHDAWCPVKDRY
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttacgatcgagtgcaaacagtaaactctgtttcctgctctccctgactctctgc
gcctctcttctgctcctgatgggactccagcagtggggaccctcggatctgcagctctct
cggtccctgcagcccttcagacagaccccccgtacccttggaaatgcaaccgcggacaga
agcctctgtaaagaggagagacgaagcggagccgcttcagcggggagctccaccgctgac
tccagcagcgcatttaaaagagaggacagccgccaccaagttgcaaaatcggacaaagtt
ctccggacttacaccaaagcgaaagggctgcaggattttgcgaagaactcgacagtgaaa
gatcagcgaggtcccggaccttgggagaaagctgcagcgctcccgtgggacatcgcaccg
cacaacaagcataacatgcaactcagtgacatttttattgcggtaaaaactactcggaag
tatcacaaagcccgattggatctgctttatcagacctggatatcactagtaaaggaacag
acattcatattcacagatggagaggacaaagaattgcaagcaaaggctggagatcgcatg
attaataccaattgctctgctgcacatacacgtcaagcgctttgttgtaagatgtccgtg
gagtatgacaaattcattgaatccaaaaaaaaatggttttgccatgttgacgatgataat
tatgtaaatattcgcagtttagtcttcttattatccgcatactcgcacactcaagatgtt
tatattggtagaccaagtcttgatcatccagtggaggctgtagagcgggtgaagagtgat
gggtcgacgactgtgaagttctggtttgccacaggaggagctgggttctgtatcagccgt
ggattggcactaaagatgagtccatgggccagttttggaaactttattagcacagcagag
aagatccgccttcctgatgattgtacaattggctatatcattgaaggtctactagaagtg
aagatgattcacagtgatctgttccactcgcacctagagaacctgcagcaaatcccacca
actgttattcccagacaggtcaccttaagttatggaagtttggaaatgaagcggaatgta
ctgagagtccaagggcctttcactttggcagatgatccttcaaggttcaagtctatacat
tgtctcctctaccacgatgcctggtgtcctgtcaaagacaggtactga
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