Chiloscyllium punctatum (brownbanded bambooshark): 140465870
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Entry
140465870 CDS
T11285
Symbol
eftud2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140465870 (eftud2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpun03041
]
140465870 (eftud2)
Spliceosome [BR:
cpun03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
140465870 (eftud2)
Complex C
U5 SnRNP specific factors
140465870 (eftud2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Septin
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
140465870
NCBI-ProteinID:
XP_072417841
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All DBs
Position
42:31480982..31531501
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AA seq
968 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDEEDGIARDDDVDEEDDDEEEAGDQDDDNVGMEVVLHEDKK
YYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKKKKFTLMEQELPETVYDMEFLADLMD
NSELIRNITLCGHLHHGKTNFVDCLIEQTHPEIRKKDDRDLRYTDILFTEQERGVGIKST
PVTMVLPDSKGKSYLFNIIDTPGHVNFSDEVTAGFRISDGMVLFIDAAEGVMLNTERLIK
HAVQEKLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLLSVYSTDENLIVSPLL
GNVCFASSQYSICFTLGSFAKIYADTYGDINYMEFAKRLWGDIYFNPKTRKFTKKAPTSN
SQRSFVEFILEPVYKILSQVVGDVDTTLPRTLDELGIHLTKEELKLNIRPLLRLVCKKFF
GDFTGLVDMCVQHIPSPQSGARNKIEHTYTGSLDLDLGETMLECDPDGPLMCHTTKMYST
EDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIEVNRV
PAGNWVLIEGVDQPIVKTATITEPRGNDEAQIFRPLKFNTASVIKIAVEPVNPSELPKML
DGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVTFCE
TVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTKYDW
DLLAARSIWAFGPDTTGPNILVDDTLPSEVDKALLGYVKDSIVQGFQWGTREGPLCDEPI
RNVKFKILDAVIAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPADCVS
AVYTVLARRRGHVTQDAPIPGSPLYTIKAFVPAIDSFGFETDLRTHTQGQAFSLSVFHHW
QIVPGDPLDKSIIIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLELAKQ
DVVLNYPL
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggatacggacttgtatgatgaatttggtaactatattggaccagaattggactctgat
gaggaagatgggatagctagggatgatgatgtggatgaggaggacgatgatgaagaagaa
gctggagatcaggatgatgataatgttggaatggaagtggtgttgcatgaagataagaag
tattatcccacagcagaagaggtgtatggacctgaggtagagacaattgtccaagaagag
gatactcaacctctcacagaaccaatcattaaacctgtcaagaaaaagaagtttacgttg
atggagcaggagttaccagaaacagtatatgatatggagtttcttgcagatttaatggac
aattctgaacttattcgaaacattactctctgtgggcatttgcatcatgggaagacaaat
tttgttgattgcttaattgaacagactcacccagagattcgtaaaaaggatgacagagat
cttcgctacactgatatacttttcacggagcaggagaggggagtaggtataaagagtaca
ccagtcacaatggtacttccagattctaagggcaaatcctacctcttcaacatcatagat
actccaggtcatgtaaacttctctgatgaggttacagccggtttcaggatctctgatggc
atggtgcttttcattgatgcagcagagggggtaatgctgaatacagagagattgattaaa
catgcagtacaggagaagctagctgtcactgtttgtatcaataaaatagacagactcatt
ctggagctaaagctgcctccaactgatgcatattacaaactacgtcacattgtggatgaa
gttaatggattgcttagtgtctattcaacagatgaaaacctgattgtttcccctctgttg
ggcaatgtttgctttgctagttctcaatacagtatttgcttcaccctgggatcctttgcc
aagatttatgctgatacatatggggacattaactatatggagtttgcaaagcgtctgtgg
ggtgacatttactttaacccaaaaacacggaagtttactaagaaggcaccgaccagcaat
tctcagagaagttttgtagagttcattctggaacctgtttacaagattctttctcaggtt
gttggtgatgtagacaccactctgccacgtacattagatgagcttggtattcatttgaca
aaggaggaattaaagctcaacatcaggccattgctgcggctcgtctgcaagaaatttttt
ggtgactttacagggttggtagatatgtgtgtgcaacacatcccatccccacagtccggt
gcaaggaataaaattgaacatacatatacaggtagcctggatttggatcttggcgaaact
atgcttgaatgtgatcctgatggccctttgatgtgccacaccactaagatgtacagcaca
gaggatggagtacaattccatgcatttggtagggtgttgagtggaaccattcatgctggg
cagccagtgaaagtacttggagagaactacacactggaggatgaagaagattcacaaatt
tgcacagtgggtaggctgtggatttcggttgcaaggtatcatatagaggttaacagagtt
ccagctggtaactgggtactcatagaaggagtagaccaacccattgtaaagacagcaacc
atcacagaaccaagaggcaatgatgaggctcagatcttcaggcctctcaagtttaataca
gcatctgtcattaaaattgctgtggaacctgtcaacccatctgagcttccgaagatgttg
gatggtttaagaaaggttaacaaaagctacccatcactaactactaaggtggaagagtct
ggagagcatgtaatactggggactggagaactttatctggactgtgtaatgcatgacctt
aggaagatgtattctgaaattgatataaaggtagctgatcctgttgtaacattctgtgaa
actgttgtggaaacctcatctttgaaatgttttgcagagacacccaacaaaaagaataag
atcacaatgattgcagaacccctagagaaaggtttagcagaagatattgagaatgaagtt
gtccaaattacctggaacaggaaaaaactgggtgaatttttccagacaaagtatgattgg
gatttattggctgcccgttccatttgggcctttggacctgacacaacaggcccaaacatt
ttggttgatgatacattgccatcagaggtggataaagcacttttaggttatgtgaaagac
agcatcgtccagggattccagtggggaactcgagaaggaccactttgtgatgagccaata
cgcaatgtgaaattcaagatacttgatgcggtaatagctcaggagccgttgcacagaggt
ggaggacaaattattcctacagccagacgagtagtgtattcagctttcctaatggccaca
cctcgtctgatggagccttattactttgtggaggtgcaggcaccagcagactgtgtttca
gcagtttatacagtcttggctagaaggagaggccatgtgacacaggatgcaccaatccca
ggttctccactttatacaatcaaagcatttgtaccagctattgattcatttggctttgag
acagacctgcggacacacacacaggggcaagctttctctctctcagtcttccaccattgg
cagattgtacctggtgatcccttggataaaagtatcattatcagacccttggaaccacaa
cctgcacctcatctggccagagaattcatgatcaaaacaaggaggagaaagggcctcagt
gaagatgtcagtatcagcaaatttttcgatgatcccatgttgctggaacttgcaaagcag
gatgtggttctcaattatcccttataa
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